Trematomus bernacchii (emerald rockcod): 117469475
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Entry
117469475 CDS
T09643
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117469475 (cdx1b)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117469475 (cdx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117469475
NCBI-ProteinID:
XP_033969782
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MYVSYLQLDKDPNMYQNPGPRHPLSLSPQSFTSAPPQYSDFPGYHHHPHHHPHHHPHHPG
LTTEQQAGGSGGNTGGWSSSYPPPPPPSRDEWSSHYAAAVAGGGASSSGGSAVVGPSLGF
NPADFPGQLNASVGQMSPGSPQRRNPYDWIRRSSAPTSNPNGKTRTKDKYRVVYTDHQRL
ELEKEFHYSKYITIRRKSELATTLGLSERQVKIWFQNRRAKERKITKKKLQQPASSSSTT
PPANGSGGVLHGNGGNSVSMVTSSSGNNGLVSPSSLALNIKEEY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttacctgcagctggacaaggaccccaacatgtaccagaacccgggcccg
aggcaccccctgagcctcagtccacagagcttcacctccgccccgccgcagtactcagac
ttccccgggtaccaccaccacccgcaccaccacccgcaccaccaccctcaccacccgggc
ctgaccaccgagcagcaggccgggggctccgggggaaacaccgggggatggagctcctct
tacccgcctcccccgcctccatcccgggatgaatggtcgtctcactacgcggcggcggtg
gcaggagggggggcttcatcctccgggggatccgcggtggtgggtccctctctggggttc
aacccggcggatttccccgggcagctgaacgcctcggtcggccagatgtcgcccggatcc
ccgcagaggaggaacccgtacgactggatccgccggagctccgcgcccacatccaacccc
aacgggaagacgcggactaaagataagtaccgggtggtttacaccgaccaccagcgtctg
gagctggagaaagagtttcactacagcaaatacatcaccatcaggaggaagtcggagctg
gccacgacgctcggcctctcagagagacaggtgaagatctggttccagaaccgccgggct
aaagagcgtaaaatcaccaagaagaagctccagcagccggcctcctcttcctccaccacg
cctccagccaatgggagcggtggtgttctccatggaaacggcggaaacagcgtctccatg
gtgacgagcagcagtggtaacaacgggctggtgtcgccctcctcgctggctctgaacatc
aaagaggaatactga
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