Trematomus bernacchii (emerald rockcod): 117469487
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Entry
117469487 CDS
T09643
Name
(RefSeq) complement C3-like isoform X1
KO
K03990
complement component 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04145
Phagosome
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117469487
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117469487
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117469487
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117469487
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117469487
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117469487
Peptidases and inhibitors [BR:
tben01002
]
Peptidase inhibitors
Family I39: alpha2M family
117469487
Membrane trafficking [BR:
tben04131
]
Endocytosis
Phagocytosis
Opsonins
117469487
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117469487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
MG1
A2M
A2M_recep
NTR
MG4
MG3
MG2
ANATO
C3_CUB2
Transglut_C
DUF2019
Motif
Other DBs
NCBI-GeneID:
117469487
NCBI-ProteinID:
XP_033969799
LinkDB
All DBs
Position
Unknown
AA seq
1656 aa
AA seq
DB search
MRKTLLWLLASLAFVSLTSLADGAPLEVMSAPNLLRVGTAENVFVECQDCTGEDKRVEIH
VMNHPTKNIRLATASVTLNSTDKFQALVQIMIPAGDFSKDPSIKQYVYLQAEFPDRLLEK
VVMVSFQCGYIFIQTDKTIYTPNSKVHYRMFAVTPRMEPVERDDANQKDASIAIEFVTPE
GIILARDPVSLKSGIHSGDYQLAEIVSTGLWMIRAKFHSNPQQSFSAEFEVKEYVLPSFE
VKLNPTSSFFCVDDRELTVNIKATYLFGQEVNGVAYVVFGVINDGQKKSFPSSLQRVQIE
EGVGAVTLKKEHITTTFKNIEELVTNSIFVAVSVLTENGGEMVEAELRNIQIVKSPYTIH
FKKTPKYFKPGMTFDVAVEVVNPDNTPAQGVSFVVEPGTVTGMTADNGMARLTINTGGYP
QLRITASTNDPRISSTRQASANMTALPYITQSNNYIHIGVDSAEVQLGNNLKIDLNLKRQ
ESYDTDITYLIMSRGQLVQKGRYNTRGQVLISLMVIITKDMLPSFRIIAYYHTNENEVVS
DSVWVDVKDSCMGSLKLEPSRPTPSYEPRRMFGLKVTGDPGAIVGLVAVDKGVYVLNNKH
RLTQKKVWDIVEKYDTGCTPGGGMDSMSVFYDAGLLFESNAASGTLYRQELKCPAPSRRK
RETTIMDVRTSLLSNYTEKLQRDCCLDGMRDTLLSYTCERRVEYIVDGEACAAAFLHCCK
DMENQRADSKVESLQLARSEEDGNSYIDSNDIVSRTKFPESWLWSDITLPACPGRNPCDT
TSVIKNVLLQDSITTWQFTGISLSTTHGICVGDSLEVIVRKEFFIDLRLPYSAVRGEQLE
VKAILHNYSDDPATVRVDLIEEDNVCSSASKHGKYRQEVRIGAQSTRSVPFIIIPMKEGE
FRIEVKAAVKDSSLNDGIMKMLRVVPEGVLVKEPQIVIIDPTNKGVDGEQVVIINSGIAK
KDLVPNTPTSTQISVTGREQVSALVENAVSGNSMGTLIKKPYGCGEQNMMRMTLPLIAAT
YLDKTDQWETVGFEKRAEALHHIKTGYNRQLHYRKTDGSFAIYPEYPSSSWLTAYVAKVF
AMANNLVAVDRAHICEAITFLILNAQQPDGSFIEVGMVIMGQIMGGVRGSDSDASMTAFC
LIAMQESRTLCAASVGSLPGSIDKAVAYLERRLPSLTNPYAVAMTSYAMANENKMNRQIL
YKFASPEFNHWFTPKGDICTLEATAYALLALVKAKAFEDARPVVRWFNKQQFVGGGYGST
QATIMVYQAISEYWSSAKEPEYDLNVDILLPGRVKPERYNFNRDNHYAPRTSKINDINQN
VTVTANGSGEATVTMVSLYYALPKQKESDCQKFNLSVQLIPEKIDKDEKIYKLRIEVLYK
DKERDAAMSILDIGLLTGFTANTKDLDSLSKGHARTIAKYEMDKVLSERGSLILYLDKVS
HTRPEEIIFRVHQKMKVGVLQPAAVSVYEYYEQTHCVEFYHPERKGGQLPRLCRDDECTC
AEENCSMQKKEKINNDQRTDKACESTETSKIDFVYKMKLEVFEDGLSTDIYTMRVLEVIK
EGTFDVGPLNKLRTFLSFPNCRESLDLVVGKTYLIMGTSDDIHRDDAHQTYQYVLGERTW
IEYWPTEAECQADEHRPTCLGMEEMVQTYQLFGCQL
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagactctgctgtggctgctggcctctctggcctttgtctccctgacttctctt
gctgatggagctccattggaggtgatgtctgcccccaacttgttgagggtaggaacagca
gaaaacgtttttgtggagtgtcaagactgcacaggtgaagacaaaagggtggaaatccat
gtgatgaaccatccaaccaaaaacataaggctggcaactgcatctgtgacacttaacagt
acagataaattccaggcgctggtacagatcatgatccctgctggagacttcagtaaggat
cccagcattaagcagtatgtgtatctgcaagctgagttccctgaccgactgcttgagaag
gttgtcatggtctcctttcagtgtgggtatatcttcatccaaactgacaagaccatctac
acccccaacagcaaagttcattacaggatgtttgctgtgacaccccgtatggagcctgtg
gagagggatgacgccaaccaaaaggatgcgtctattgccatcgagtttgtgacccctgaa
ggcataattttagcacgtgatccagtctctttgaaatcagggatccactctggagattac
caactcgctgaaattgtcagtactggcctgtggatgatccgcgcaaagttccacagcaac
ccacagcagagctttagtgcagagtttgaggtcaaagaatatgtgcttcccagttttgag
gttaaactgaatcctacgagctctttcttctgtgtggacgaccgagagctcacagtcaac
attaaagccacgtatttgtttggtcaagaggtgaatggggtggcctacgttgtgtttggg
gtcataaatgatggtcaaaagaagagctttccaagttctcttcagagagtgcagattgaa
gaaggtgttggagctgtcacgctgaagaaagagcacatcacaacgaccttcaaaaacatt
gaagaactggtgacgaattccatatttgtagctgtcagtgtgctaacggagaacggtggt
gaaatggtggaggcagagttgagaaatattcagattgttaaatctccttacaccatccac
ttcaagaaaactccaaaatatttcaaaccaggaatgaccttcgatgttgcagttgaagtt
gtgaatcctgacaacactccggcacaaggtgtttcttttgtggttgaaccaggcactgtg
actggcatgaccgcagacaatggcatggcaaggctaaccatcaatacaggagggtaccca
caactgaggatcactgcaagtacgaatgatcctcgtatttcatcgacaagacaagcatca
gccaacatgacagctctcccatatattacccaaagcaacaactatatacacataggtgtg
gattcagctgaagtacaattaggaaataacctgaaaatcgacctcaacctcaaaaggcag
gaaagttatgacactgacatcacatatctgatcatgagcagaggtcagctggtgcaaaaa
ggacgatacaacacaagaggtcaagtactgatctccctgatggttatcattaccaaagac
atgctgccatcgttccgcatcatagcctattaccacacaaatgagaatgaagtggtatca
gactctgtttgggtggatgtaaaagactcctgcatgggttcgctgaagctggaaccatcg
agacccactccatcctatgagcctcgcaggatgtttggtctgaaggttacaggagaccca
ggggccatagtgggactggtggcagtggacaaaggcgtctatgtccttaacaacaagcac
cgcctcacacagaaaaaggtgtgggacattgtagagaagtacgacacaggttgcacacca
ggtggagggatggacagtatgagtgtgttctacgacgctgggctgctgtttgagtccaac
gcggcttctgggaccctctacagacaagaattgaaatgtccggcaccgagcaggaggaaa
cgagagactacaatcatggatgtcagaaccagcttactgagtaactatacagaaaaactg
caacgggactgttgtttggatggcatgagggacaccctcctctcttacacctgtgaaagg
cgtgtagagtacattgttgatggtgaagcctgtgcagcagccttcctgcactgctgcaag
gacatggaaaaccagcgagctgacagcaaggtggagagccttcaactggctcgcagtgag
gaggatggcaacagttacattgacagcaatgacattgtttctcgcaccaagttccctgaa
agttggctctggtcagatatcacacttcctgcttgccctggacgaaacccatgcgatacc
acatcagtgattaaaaatgttctactgcaagactcaatcaccacctggcagtttactggc
attagtctgtcaactactcacggaatctgtgttggtgattcgttagaggtgattgtccgg
aaggaattcttcattgatctcaggctgccatactctgctgtccggggagagcagctggaa
gttaaggcaatcctgcacaactacagcgacgatcctgcaactgtgcgggttgatctgatt
gaggaggataatgtgtgcagttcggcttcaaagcatggaaagtatcgccaggaggtccga
attggggctcaaagtacccgatctgtgcccttcatcatcattcccatgaaagaaggagaa
ttccgcattgaggtcaaagctgctgttaaagattcatcgcttaatgatggaattatgaag
atgctgcgggtggtgcctgaaggtgtactagtaaaagaacctcagattgtaattatagac
cccactaataaaggtgtagatggtgaacaagtagtaattatcaacagtggaattgccaaa
aaagatttggttccaaacacaccaacaagcactcagatctctgtgacagggagagaacaa
gtttctgccctcgtggagaacgctgttagcgggaactctatgggtactctaatcaaaaag
ccctatggctgtggagagcagaacatgatgagaatgaccctacctctcattgcagccaca
tatttggacaaaaccgaccagtgggaaactgtgggctttgagaaacgtgcagaagccctc
catcacatcaagactggctacaaccgacagcttcactaccggaaaacagatgggtctttt
gctatttatccagaatacccaagtagctcctggttgacagcctatgttgccaaggtgttt
gccatggcaaacaatctggtggcagtggacagagcacacatctgtgaggccatcacgttt
ctgattctcaacgcacagcaacctgatggctcatttatagaagttggaatggtgatcatg
ggacagattatgggtggtgtgcgtggctcagattcagatgcctccatgacggccttctgc
ctcattgctatgcaggagtcacgtacgctatgtgctgccagtgttggtagtctaccaggc
agtatagacaaagcggtggcctatctggaaaggcgtctgcccagcctcaccaacccatat
gctgttgccatgacatcatatgccatggccaatgaaaacaaaatgaaccgccagatcctc
tacaagtttgcttccccagagtttaaccactggtttacgcctaagggagatatctgcaca
ctggaggctacggcttacgctcttctcgctctggtcaaggccaaggcttttgaagatgcc
agacctgttgtgagatggttcaacaaacagcagtttgttggcggaggctatggatcgact
caggccaccattatggtgtaccaggctatatcagagtactggtccagtgctaaagaacca
gagtacgatctgaacgtggacattttgttgccgggaagggtaaagcctgagaggtacaac
ttcaacagggataaccactatgccccaaggacatctaaaatcaatgatataaaccagaat
gtgacagtgactgccaacggttcaggagaagcaacagtgacaatggtgtcgctgtactac
gctctacctaaacaaaaggaaagtgattgtcagaagtttaacctgtcagtgcagctcatc
ccagaaaaaattgataaggatgagaagatatacaagctgaggatagaagtgttgtataag
gacaaggaaagagatgcagcaatgtcaattttggatattggcttgctaaccggcttcacc
gctaacacaaaggacttggactcattgtccaaaggacatgcccgcaccatcgcaaaatat
gagatggacaaagtcctgtcagaaagaggctcactcatcctctacctggacaaggtttct
cacacacgaccagaagaaataatttttagggttcatcagaagatgaaagtgggcgtctta
caaccagcggctgtatctgtctatgaatactatgagcaaacacattgtgtggagttctac
catccagagaggaaaggaggacagctaccgcggctctgcagagatgatgagtgcacatgt
gctgaagagaactgcagtatgcagaagaaggagaaaatcaacaatgatcagcgcacagat
aaggcttgtgagagtacagaaaccagcaaaatagattttgtgtacaaaatgaaactggaa
gtgtttgaagatggtttgtccacagacatttacacaatgcgtgttctggaagtcatcaaa
gaaggaacatttgatgtgggtcccctgaataaacttcgcaccttcctcagttttccgaac
tgcagggagtctttagatttggttgttggcaaaacgtaccttatcatgggaacatcagat
gatattcacagagatgatgcacatcaaacgtatcagtatgtacttggagaaagaacctgg
atcgagtactggcccacagaagctgagtgtcaagctgatgaacacagacctacctgtttg
ggcatggaggagatggtccagacgtaccaactctttggatgtcagctgtag
DBGET
integrated database retrieval system
