Trematomus bernacchii (emerald rockcod): 117469706
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Entry
117469706 CDS
T09643
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117469706 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117469706 (nedd1)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
117469706 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
117469706 (nedd1)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
117469706 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
KNTC1_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
117469706
NCBI-ProteinID:
XP_033970072
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MEEVTRLVSTGDCVRIWDAGSMAPLEQFNPHSSGHPVNQACWSSNNHYLVSASSSGDKLV
VCSLKTSPVPVVELGDGKKQTCVSLSSSSQFLASGGLDHCVHIWDLKSKRLHRSLRDHKE
EVTCVSFNSNDSLVASGSSSGDLVLHSLTTNLSSKAFGHGSNQPIHALRLSPLRRSLLGS
VSDSGSVVLWDSNTQKELHAFDGAHKAPGSGLAFSPSSELLVVSVGLDKKVLCYDTASKI
VLRSIRVDSPLTAVDFSPDGTGLVVGSTQGKILHYDLRNSSAPTRVTAAHKTSVTCLRFQ
SSSSRLKPSSRLGSTKIVKRSSSSSQPDSAPSTGPAPSTGPAPSTGPAPSTGPAPHRQVT
GTAGGAAAEVLTREEPLPVGEKFSKVGRNSLDMFSPAREDPRFPGTSGDTPFSRTHVPSL
EAQHVVGRASLDIFSPVREDSQSLVHRKTPLGTPLTAGRCYSPLSTFQTPLPIKEEEPIT
AAAESCDPGRLEKGSSSSLEGEGPTLPTSPQLTNHSQPAPPFFTPDLRRANGIQAQLNYE
SPAQGAPPTAAAASLSSSLSQNIMEVVGQGAAAPLSSLQIHFIQNMIHETLEDFRDVCHR
DIVNLQVEMVRQFYIQLNEIHGLVEKYSVNESLVEEVEKLREENRRLKTNY
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacccgcctggtgtccacaggagactgtgtgaggatctgggatgccggt
tcgatggcccctctggagcagtttaacccccacagcagcggacacccggtgaaccaggcc
tgctggagctccaacaatcattacctggtgagtgccagcagcagcggagacaagctggtg
gtctgcagcctgaagacctctccagtcccagtggtggagctgggagacgggaagaagcag
acgtgcgtctctctcagctcctcgtctcagttcctggcgagcggaggcctcgatcactgc
gttcacatctgggacctgaagagcaagagactgcaccgctcgctcagggaccataaggag
gaggtgacctgcgtctcctttaactccaacgacagcctggtggcgtcgggctccagcagt
ggagacctggttctgcacagcctcaccaccaacctgtccagcaaggccttcggacacggc
agcaaccagccgatccacgcgctgcgcctgtcccccctgcggcgctccctgctgggcagc
gtgtcggacagcggctcagtggtgctgtgggactcgaacacgcagaaggagctgcacgcc
ttcgacggcgcccacaaagcgcccggctccggcctcgccttctccccctccagcgagctg
ctggtggtcagcgtggggctggacaagaaggtcctgtgctacgacacggccagcaagatc
gtgctgaggtccatccgggtggacagccccctcacggcggtagacttctctccggacggc
acggggctggtggtgggctccacgcaggggaagatcctccactacgacctgaggaactcc
agcgcccccaccagagtcaccgccgcgcacaaaacctccgtcacctgcctccgcttccag
agcagcagcagcagactcaagccgtccagtagactcggatccacgaagatcgtgaagagg
tcgtcgtccagcagccagcctgactccgcccccagcacaggccctgcccccagcacaggc
cctgcccccagcacaggccctgcccccagcacaggccccgccccccacaggcaggtgaca
ggtacagcaggcggcgctgcagcggaggttctgacccgcgaggagccgcttcctgtcggg
gagaagttcagcaaggtgggccggaacagcctcgacatgttctctccggcccgggaagac
cctcgtttccccgggacgtccggagacacgccgttcagccggactcatgtccccagcctg
gaggcgcagcacgtggtgggccgcgccagcctggacatcttctcccccgtcagagaagac
tctcagtccctggttcaccgtaagactcctctggggacgcctctgaccgccgggcgctgc
tacagcccgctgtccaccttccaaacccccctccccatcaaagaggaggagccaatcact
gccgccgctgagtcatgtgaccccgggaggctggagaaggggagcagctccagtctggag
ggggaggggccgaccctgcccacttcccctcagctgaccaatcacagccagccagccccg
cccttcttcaccccagatctcaggagagccaatggaattcaagctcagctgaactacgag
tcacctgcacagggagccccgcccactgcagcagcagcctccctctcctcctccctctcc
cagaacatcatggaggtggtcggtcagggagcagctgctcctctctcctcccttcagatc
cacttcatccagaacatgatccatgaaactctggaggacttcagagatgtgtgtcacaga
gacatcgtgaatctccaggttgagatggtgcggcagttctacatccagctgaacgagatc
cacggcctggtagagaagtactctgtgaacgagtctctggtggaggaggtggagaaactg
agggaggagaaccgccggctgaagaccaactactga
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