Trematomus bernacchii (emerald rockcod): 117469900
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Entry
117469900 CDS
T09643
Symbol
htr3a
Name
(RefSeq) 5-hydroxytryptamine receptor 3A
KO
K04819
5-hydroxytryptamine receptor 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117469900 (htr3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117469900 (htr3a)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Serotonin (5-HT3)
117469900 (htr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117469900
NCBI-ProteinID:
XP_033970261
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MDLVEGYGGYVSEASRGLSSERQEGFQVKRHHESLISVDLKKPGSSTGRFANATLVRLSE
FLSAGYKKGVRPVKDWRTSTFVAIDLMVYAILNVDEKNQVLTTYVWYRQSWTDEFLVWNP
EDFDEVKQLSLPTANVWVPDILINEFVDVGKSPDIPYVYVTHDGLVRNYKPIQVVTACTL
NIYNFPFDVQKCSLTFQSWLHTIDDINITLMRSPEELREDKSVFMNQGEWELLHILSNYK
IFSVDNDDYYAEMKFHVVIRRRPLFYTVNLLLPSMFLMVMDIVGFYLPPDSGERVSFKIT
LLLGYSVFLIIVSDTLPATAIGTPLIGVYFVVCMALLVISLTETVLIVRLVHKQDLQPPV
PPWLKYLILELAPVLFCIHRKPRLCSNLTSQPPDLELYKESSYGTAQCPLHHTCELGRRR
SHLDREGGGSLEGVLLGLGRPLPRDPTPPVMDNILQEVTAIRHFLEKRDRCREVAKEWLQ
VGYVLDVLLFRVYLVAVVAYSITLGTLWSVWQVA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtggagggatacggaggatatgtgagtgaggcgtcccgaggcctttcatca
gagcggcaggaaggcttccaggtgaagcggcaccatgagagcctcatcagcgtggacctg
aagaagccgggcagcagcacagggaggtttgctaacgccaccttggtgcgtctctctgag
tttctgagtgccggctataagaagggagtgagaccggtgaaggactggaggacgtccacc
ttcgtggccatcgacctcatggtgtacgccatcctcaatgtggacgagaagaaccaggtt
ttgacaacgtatgtgtggtacaggcagtcatggacggatgaattcctggtgtggaacccg
gaggattttgatgaagtgaaacagctttctttacctacggctaacgtgtgggtgccggac
atcctcatcaatgagtttgtggatgtggggaagtctccggacataccgtacgtctatgtg
acccacgatggactggtgcgaaactacaagcccatccaggtggtgacggcctgcacgctc
aacatttacaacttccccttcgatgtgcagaaatgcagcctcaccttccagagctggctg
cacaccatcgacgacatcaacatcacgctgatgcgaagccccgaggagctcagggaggac
aagagtgtgttcatgaaccagggagagtgggagctgctgcacattctgtccaactacaag
atcttcagcgtggacaacgacgactactacgctgagatgaagttccacgtggtgatccgg
cggcggccattgttctacacggtgaacctgctgctgcccagtatgttcctgatggtcatg
gacatcgtgggtttctacctgcctccagacagcggggagagggtttcctttaagatcact
ctgctgctggggtactctgtgttcctcatcatcgtgtctgacaccctacctgccaccgcc
ataggaaccccgctcataggtgtgtactttgtggtgtgcatggccctgctggtgatcagc
ctgacagagaccgtattgatcgtgcgtctggtccacaaacaagacctgcagccccccgtc
ccgccctggctgaagtacctgatcctggagctggcccccgtgctgttctgcatccacagg
aagccccgcctctgctccaatctgacctcacagccccccgacctggagctctacaaggag
agcagctacgggaccgctcagtgtcctctgcaccacacctgtgagctgggccgtaggcgc
agccacctggacagagaggggggggggtctctggagggggtgctgctgggcctcggccgc
cccctccccagagaccccaccccgcccgtcatggacaacatcctgcaggaggtgacggcc
atacgccacttcctggagaagagggaccggtgcagggaggtggccaaagagtggctgcag
gtgggctacgtgctggacgtgctgctcttcagggtctacctggtggccgtggtggcctac
agcatcactctgggaaccctgtggtccgtgtggcaggtggcctga
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