Trematomus bernacchii (emerald rockcod): 117469909
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Entry
117469909 CDS
T09643
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117469909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117469909
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117469909
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117469909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
FANCL_C
Motif
Other DBs
NCBI-GeneID:
117469909
NCBI-ProteinID:
XP_033970277
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPFQRAVIKVALLNQESTGKPITLQGVF
VRGSAGRAEGKLMQYHPLSLCNTSEDERQEGDFITIVKLEHRVPRCLPLVDKARMALDKG
AQAVIFDVSDDANAASDLREADFLRGPVVLVEAQNAEELMGLVNKNEEAKVTIELLVELP
SWQHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYSSQGC
SGAQRHRAAWGSASSSNSSPVCAICLDEFLDGQHLRIISCAHEFHKECVDPWLLQHRTCP
LCMHNIMGTERQPQRTSRQSQEQSQSFLHPQPFSSPHSHLFPQHAIPFSMRPHYPRGPSG
PYPSLGHYSGSSPVDAQTLRFLTSRQLASSCGYHLPVEGPGRPHRISGNCRTSTHHYTPR
RPCHNNYRSACPAQRSASSSRLQHAASSTPQPRGAPPHTRQDDGSCSGGSYHTERSGYLA
DGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGHGP
RRSSLEEGAQARPRSLDSVVNKAGCPEEQTQTVFSHIHYHRHRHHHYEEGEHSRGSDEEQ
GAAAADAAASAAPLLDKDSPMCPPKHSPCQCPKPEPTDRPSPGAECQDPSSPPPVLVSPI
PLQLQPHCCHQGHGHPPAPLGRVGGYVHDGPSVRFHQSLDLQDDRSIHIHYGQGPGFCCS
PPELHPALLPVPLILDSGGIEEWPCYAGAHVVWQKRVQQARSEPQLLGPGAPMDRPPCRF
YHGPAADCNTDICLHCQTLHHNQGSEEESGV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccgttccagcgagcggtcatc
aaggtggcactgctgaaccaagagtcgacggggaagcccatcactctgcaaggggtgttc
gtgcgaggaagtgccggcagggcggagggaaaactaatgcagtatcaccctctgtctctg
tgcaacacaagtgaagatgaacgccaagagggtgacttcatcaccattgtcaaactggag
cacagggtaccacgctgtctgccgctggttgataaggctcgtatggcattggacaaagga
gctcaggccgtgatctttgatgtcagtgatgatgccaatgctgcttctgatctgagagaa
gcagacttccttcgcggccccgtggtgctggtggaggcacagaatgctgaggagttgatg
ggtttggttaacaagaacgaagaggccaaagttactattgagctcctggtggagctgccc
agttggcaacattatgatgttggtatcctgctcaccattgtcctagctattctgaccatc
gtcctaatcttcgctttccgctacaagtgcaagtccaaccggacctgggactcagtccat
cagcagaccatgcgggccatcagtcgcctggagaccaagacgtacagctctcagggctgc
tcgggggcccagcggcaccgcgcagcctggggctcggccagcagctccaactccagcccc
gtctgtgccatctgcctggacgaattcctggacgggcagcatctgaggatcatctcctgc
gctcacgagttccacaaagagtgtgtcgacccctggctgctgcagcaccgcacctgtccc
ctctgcatgcataacatcatggggacggagcggcagccccagaggaccagcagacagagt
caggagcagagccagagcttcctgcaccctcagcccttcagcagcccacacagccacctc
ttcccccagcacgccatccccttctctatgaggccccactatccccggggaccctcagga
ccgtacccctctctgggccactactctggctcttctcccgtagacgctcagacactacgc
ttcctcaccagcaggcagctcgcctccagctgtgggtaccaccttcctgtggagggtccc
gggaggccccataggataagtggtaactgcaggacttccactcaccactacaccccccgt
cggccctgccacaacaactaccgctcagcctgccctgcccagcgcagtgcatccagctcc
agactgcagcacgcggcctcctccacgccacagccccgcggagcgcccccccacacccgg
caggacgacggcagctgctcgggggggagctaccacacagaacgcagcgggtacttggct
gatgggccagcaagtgactccagttcggggccatgtcatggctcctccagcgactctgtc
ctgaactgtactgacgtgtccctgcagggggtctatggcagctggtccaccttccggagc
tccctgagcagtgactacgatccgtttgtgtattacgggccaggtcctggacacgggccc
cgcaggagcagcctagaggaaggggcccaggcccggcccaggtctctggattctgttgtg
aacaaagcaggctgccccgaggagcagacgcagactgtgttcagccacatccactaccac
cgccacagacaccaccactatgaggagggggagcacagcaggggctcggacgaggagcag
ggggccgctgctgctgatgcagctgcttctgctgctcctctcctggacaaagactcgccc
atgtgcccccctaagcacagcccctgccagtgcccgaagccagagcccacagaccggccc
agtccgggggccgagtgtcaggaccctagcagccctcctccagtcctggtgtccccaatc
cccttacagcttcagccccactgctgccaccagggacacggacaccctcccgctccactt
gggcgagtggggggctacgttcacgacggcccctctgttcgcttccaccagagcctggat
ctgcaggacgaccgcagcatccacatccactatggtcaggggcccggcttctgctgctcc
ccccctgagctgcaccccgccctgctccccgtgcccctcattctggactctgggggtatt
gaggagtggccctgctatgccggggcccatgttgtgtggcaaaagcgggtgcagcaggcc
cgctcagagcctcagctcttggggcccggggcccctatggacaggcccccctgcaggttc
taccacggtcctgctgctgactgtaacacagacatttgtttgcactgccaaactttacac
cacaatcagggatcagaagaggagtccggtgtgtga
DBGET
integrated database retrieval system
