KEGG   Trematomus bernacchii (emerald rockcod): 117469916
Entry
117469916         CDS       T09643                                 
Name
(RefSeq) laminin subunit gamma-1-like
  KO
K05635  laminin, gamma 1
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04510  Focal adhesion
tben04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117469916
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117469916
SSDB
Motif
Pfam: Laminin_N EGF_laminin Laminin_B EGF_LMN_ATRN EGF_Teneurin Death MCPsignal
Other DBs
NCBI-GeneID: 117469916
NCBI-ProteinID: XP_033970282
LinkDB
Position
Unknown
AA seq 1269 aa
MRVLIRALVAASWVFLCARAAMDECSDDELRAQRCMPEFVNAAFNVTVVSTNTCGSPPEE
YCVQTGATGVTKSCHICASGDPSNHHSAGYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREGGPWVPYQYYSGSCEKTYQKAGRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNPSEQLVCDCKHSTAGDD
CSSCQPFFNDRPWRRATADNSNECLPCECNGRSSSCVFDPELYRSSGHGGRCLSCSDNTD
GPNCERCLDYYHREERGGGRCLACSCSTVGSESPQCDDRGVCACKPGVTGEKCDRCQPGF
HSLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGFFNLDPLNPQGCTP
CFCFQHSSVCESAEGFTIHTVRSSFSSDEEQWSGQQRDGGSVSVLWSSSGQEVSLISDDY
FPMYFVAPEKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNA
YPNENMQTYVFRLHDSTDYPWRPTISHNDFQKLLHNLTSIKIRGTYSEKSAGYLDDVSLV
TAMRGGPGESAHWVERCTCPQGYQGQHCEQCTLGYRRAQPELGAFSSCEPCNCNGHSQAC
NPSTGACDCQDNTAGLSCERCKDGFYGDATSGSSSDCQPCPCPNTCSVVPRTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQSGPVRACRACKCSENIDPNAVGNCERETGECLKCIYN
TDGFFCDRCRDGFYGNALAAAVGDKCKACSCSPLGTLGSQVSCSQVTGQCPCLSNVEERD
CSACQPGFYNLQSGDGCDRCNCNPIGSTNGQCDITSGQCECQPGVTGGHCERCEENSFGF
SASGCKPCDCDPEGSASAQCQDDGRCECRPGFVGSRCDMCEENYYYNRSAPGCQQCPSCY
SLVRDKVNQQRQKLQELQTLMDHLGSGQETVSDQAFEDRLKAAERSIEELLQEAQSSKDV
DRGLLERLSTINGTLSAQWNRLQNIRSTVDDTGLQSDRARSRVRDAESLIDKARHELDKA
KEAVAKVDIKAPSGSGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTRAHELL
LKTLEGESQTSREIDELNKKYTEAKELAKSLEKQANKCRRRPRTPGTETLKIFAKPHLHP
AVQHQDSGG
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgcgggttttgatccgggctctggtggccgcgagctgggtgttcctgtgcgctcgcgcc
gcgatggatgagtgttcggacgatgagctccgcgcgcaacgatgcatgcccgagttcgtg
aacgcagcctttaacgtgacggtggtgtcgaccaacacctgcggatctccaccggaggag
tactgcgtgcagaccggagccaccggggtcaccaagtcctgccacatctgcgcctccgga
gacccgtcgaaccaccacagcgccgggtacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcggggatccagtaccccaactccatcaacctc
acgctgcacctcggtaaggccttcgacatcacctacgtccggctgaagttccacaccagc
cgccccgagagcttcgccatctacaagcggactcgtgaaggcgggccctgggtgccctat
cagtactacagcggctcctgtgagaagacctaccagaaggcggggcggggcttcatccgc
accggagaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accgggggcaacgtggccttctccacgctggagggccggcccagcgcctacaacttcgac
aacagccccgtgctccaggactgggtgacggccaccgacatcagggtgactctgaaccga
ctcaacacgttcggagacgaagttttcaacgaccccaaagtcctcaagtcctactactac
gccatctccgacttcgctgtgggcggacggtgtaagtgtaacggccatgccagtgagtgt
gtgaagaacccctctgagcagctggtgtgtgactgtaaacacagcacagcaggagacgac
tgcagctcctgccagcccttcttcaacgaccggccctggaggagggcgacggccgacaac
agcaacgagtgtctgccctgtgagtgtaatggcaggagttcttcgtgtgtgttcgacccg
gagctgtaccgctcctcgggtcacggcgggcgctgcctcagctgctccgacaacacggac
ggaccgaactgcgagcgctgcctggactactaccaccgggaggagagggggggggggcgc
tgcctggcctgcagctgcagcaccgtgggctcggagtctcctcagtgtgacgacagagga
gtgtgtgcgtgtaaacccggagtgaccggagagaagtgtgaccgctgccagccgggcttc
cacagcctgacggaggccggctgcaggccgtgctcgtgctctccctccggcagcactcag
gagtgtgacgtgaacacagggcagtgtcgctgcaaagacaacgtggagggcttcagctgt
gacaggtgtaagctgggcttctttaacctggaccccctgaaccctcagggctgcaccccc
tgtttctgcttccaacactcgtcagtgtgtgagagcgctgaagggttcacgatacacacc
gtcagatcctccttctcctcagatgaggagcagtggagtgggcagcagagagatggaggc
agcgtctccgttctctggtcctccagtggacaggaagtgtccctcatctccgacgactac
ttccccatgtacttcgtagccccagagaagtttctggggaaccagatgctgagctacggt
cagaatctgtctctgagtttccgggtcgatcggcgggacacccgtctgtcagcggaggat
gtggtgctggagggggcggggcttagggtcgccgtgccactcatcgcccagggtaacgcc
taccccaacgagaacatgcagacatacgtgttcaggctccatgacagcactgattacccc
tggaggccgaccatcagccacaacgacttccagaaacttctccacaacctgacctccatc
aagatcagaggaacctacagcgagaaaagcgctggttacctggacgacgtctccttggtt
acggccatgcgggggggcccaggtgagtccgcccactgggtggagcgctgcacatgtcct
cagggttaccaggggcaacactgtgagcaatgcaccctgggataccgccgagcgcaaccc
gagctcggagccttcagttcctgcgagccgtgcaactgcaacggccacagccaggcctgc
aaccccagcactggcgcgtgtgactgtcaggacaacacagccggtctcagctgtgaacgc
tgtaaagacggtttctacggcgacgccaccagcggctcgtcctccgactgtcagccgtgt
ccgtgtcccaacacctgctccgtggtgcccaggaccagagaggtggtgtgcaccaactgc
cctgcagggaccacaggtaagcgctgcgagctgtgtgacgacgggttcttcggcgacccg
ctgggtcagagcggcccggtcagagcctgccgagcctgtaagtgcagcgaaaacatcgac
ccgaacgcggtggggaactgcgagcgagagaccggcgagtgtctgaagtgcatctacaac
acggacggcttcttctgcgaccgctgcagagacggcttctacgggaacgccctcgccgcc
gccgtgggggacaagtgcaaagcctgctcctgctcgccgctcggcactctgggtagtcag
gtgagctgctcccaggtgacggggcagtgcccgtgcctctctaacgtcgaggagagagac
tgcagcgcctgccagcccggattctacaacctgcagagcggggacggctgcgacaggtgt
aactgtaatccgattggctccactaacggtcagtgtgacatcacgtcgggtcagtgcgag
tgtcagcccggagtcaccggaggccactgtgagcgctgcgaggagaactcctttggattc
agcgcctcggggtgcaaaccctgtgactgtgaccctgagggctcggcctcggctcagtgt
caggacgacgggcgctgcgagtgtcggccgggattcgtcggatctcgctgtgatatgtgt
gaggaaaactactactacaaccgctcagcgcccggctgccagcagtgcccgtcctgctac
agcctggtccgggacaaggtgaaccagcagcggcagaagctgcaggagctccagactctg
atggaccacctgggctcggggcaggagacggtcagcgaccaggccttcgaggaccgactg
aaggcggcagagaggagcatcgaggagctgctgcaggaggctcagagcagcaaggacgtg
gaccgcgggctgctggagcgtctgagcaccatcaacggtactctgagcgctcagtggaac
cgcctgcagaacatccgcagcaccgtggacgacaccgggctccagtcggaccgagccagg
tccagagtgagagacgcagagagtctgatcgataaagcccgccacgaactggacaaagcc
aaggaggccgtggccaaagtggacatcaaagccccgagtggcagcggagacccgaacaac
atgacactgctcgctgaggaggcccgcaacctggccgacaagcacaaaatggacgccgat
cagatcgagaagatcgctaaagacgccaacgacacgtcgactcgagctcacgagctgctg
ctgaagactctggagggcgagagccagacgagccgcgagatcgacgagctcaacaagaaa
tacaccgaggcgaaggagctggcgaagagtctggagaagcaggcgaacaagtgcaggcgg
aggccgaggacgccgggaaccgagacgctgaagatcttcgccaaacctcacctccatccc
gccgttcaacaccaagactctggaggatga

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