Trematomus bernacchii (emerald rockcod): 117469916
Help
Entry
117469916 CDS
T09643
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04510
Focal adhesion
tben04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117469916
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117469916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
EGF_Teneurin
Death
MCPsignal
Motif
Other DBs
NCBI-GeneID:
117469916
NCBI-ProteinID:
XP_033970282
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MRVLIRALVAASWVFLCARAAMDECSDDELRAQRCMPEFVNAAFNVTVVSTNTCGSPPEE
YCVQTGATGVTKSCHICASGDPSNHHSAGYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREGGPWVPYQYYSGSCEKTYQKAGRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNPSEQLVCDCKHSTAGDD
CSSCQPFFNDRPWRRATADNSNECLPCECNGRSSSCVFDPELYRSSGHGGRCLSCSDNTD
GPNCERCLDYYHREERGGGRCLACSCSTVGSESPQCDDRGVCACKPGVTGEKCDRCQPGF
HSLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGFFNLDPLNPQGCTP
CFCFQHSSVCESAEGFTIHTVRSSFSSDEEQWSGQQRDGGSVSVLWSSSGQEVSLISDDY
FPMYFVAPEKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNA
YPNENMQTYVFRLHDSTDYPWRPTISHNDFQKLLHNLTSIKIRGTYSEKSAGYLDDVSLV
TAMRGGPGESAHWVERCTCPQGYQGQHCEQCTLGYRRAQPELGAFSSCEPCNCNGHSQAC
NPSTGACDCQDNTAGLSCERCKDGFYGDATSGSSSDCQPCPCPNTCSVVPRTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQSGPVRACRACKCSENIDPNAVGNCERETGECLKCIYN
TDGFFCDRCRDGFYGNALAAAVGDKCKACSCSPLGTLGSQVSCSQVTGQCPCLSNVEERD
CSACQPGFYNLQSGDGCDRCNCNPIGSTNGQCDITSGQCECQPGVTGGHCERCEENSFGF
SASGCKPCDCDPEGSASAQCQDDGRCECRPGFVGSRCDMCEENYYYNRSAPGCQQCPSCY
SLVRDKVNQQRQKLQELQTLMDHLGSGQETVSDQAFEDRLKAAERSIEELLQEAQSSKDV
DRGLLERLSTINGTLSAQWNRLQNIRSTVDDTGLQSDRARSRVRDAESLIDKARHELDKA
KEAVAKVDIKAPSGSGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTRAHELL
LKTLEGESQTSREIDELNKKYTEAKELAKSLEKQANKCRRRPRTPGTETLKIFAKPHLHP
AVQHQDSGG
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttttgatccgggctctggtggccgcgagctgggtgttcctgtgcgctcgcgcc
gcgatggatgagtgttcggacgatgagctccgcgcgcaacgatgcatgcccgagttcgtg
aacgcagcctttaacgtgacggtggtgtcgaccaacacctgcggatctccaccggaggag
tactgcgtgcagaccggagccaccggggtcaccaagtcctgccacatctgcgcctccgga
gacccgtcgaaccaccacagcgccgggtacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcggggatccagtaccccaactccatcaacctc
acgctgcacctcggtaaggccttcgacatcacctacgtccggctgaagttccacaccagc
cgccccgagagcttcgccatctacaagcggactcgtgaaggcgggccctgggtgccctat
cagtactacagcggctcctgtgagaagacctaccagaaggcggggcggggcttcatccgc
accggagaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accgggggcaacgtggccttctccacgctggagggccggcccagcgcctacaacttcgac
aacagccccgtgctccaggactgggtgacggccaccgacatcagggtgactctgaaccga
ctcaacacgttcggagacgaagttttcaacgaccccaaagtcctcaagtcctactactac
gccatctccgacttcgctgtgggcggacggtgtaagtgtaacggccatgccagtgagtgt
gtgaagaacccctctgagcagctggtgtgtgactgtaaacacagcacagcaggagacgac
tgcagctcctgccagcccttcttcaacgaccggccctggaggagggcgacggccgacaac
agcaacgagtgtctgccctgtgagtgtaatggcaggagttcttcgtgtgtgttcgacccg
gagctgtaccgctcctcgggtcacggcgggcgctgcctcagctgctccgacaacacggac
ggaccgaactgcgagcgctgcctggactactaccaccgggaggagagggggggggggcgc
tgcctggcctgcagctgcagcaccgtgggctcggagtctcctcagtgtgacgacagagga
gtgtgtgcgtgtaaacccggagtgaccggagagaagtgtgaccgctgccagccgggcttc
cacagcctgacggaggccggctgcaggccgtgctcgtgctctccctccggcagcactcag
gagtgtgacgtgaacacagggcagtgtcgctgcaaagacaacgtggagggcttcagctgt
gacaggtgtaagctgggcttctttaacctggaccccctgaaccctcagggctgcaccccc
tgtttctgcttccaacactcgtcagtgtgtgagagcgctgaagggttcacgatacacacc
gtcagatcctccttctcctcagatgaggagcagtggagtgggcagcagagagatggaggc
agcgtctccgttctctggtcctccagtggacaggaagtgtccctcatctccgacgactac
ttccccatgtacttcgtagccccagagaagtttctggggaaccagatgctgagctacggt
cagaatctgtctctgagtttccgggtcgatcggcgggacacccgtctgtcagcggaggat
gtggtgctggagggggcggggcttagggtcgccgtgccactcatcgcccagggtaacgcc
taccccaacgagaacatgcagacatacgtgttcaggctccatgacagcactgattacccc
tggaggccgaccatcagccacaacgacttccagaaacttctccacaacctgacctccatc
aagatcagaggaacctacagcgagaaaagcgctggttacctggacgacgtctccttggtt
acggccatgcgggggggcccaggtgagtccgcccactgggtggagcgctgcacatgtcct
cagggttaccaggggcaacactgtgagcaatgcaccctgggataccgccgagcgcaaccc
gagctcggagccttcagttcctgcgagccgtgcaactgcaacggccacagccaggcctgc
aaccccagcactggcgcgtgtgactgtcaggacaacacagccggtctcagctgtgaacgc
tgtaaagacggtttctacggcgacgccaccagcggctcgtcctccgactgtcagccgtgt
ccgtgtcccaacacctgctccgtggtgcccaggaccagagaggtggtgtgcaccaactgc
cctgcagggaccacaggtaagcgctgcgagctgtgtgacgacgggttcttcggcgacccg
ctgggtcagagcggcccggtcagagcctgccgagcctgtaagtgcagcgaaaacatcgac
ccgaacgcggtggggaactgcgagcgagagaccggcgagtgtctgaagtgcatctacaac
acggacggcttcttctgcgaccgctgcagagacggcttctacgggaacgccctcgccgcc
gccgtgggggacaagtgcaaagcctgctcctgctcgccgctcggcactctgggtagtcag
gtgagctgctcccaggtgacggggcagtgcccgtgcctctctaacgtcgaggagagagac
tgcagcgcctgccagcccggattctacaacctgcagagcggggacggctgcgacaggtgt
aactgtaatccgattggctccactaacggtcagtgtgacatcacgtcgggtcagtgcgag
tgtcagcccggagtcaccggaggccactgtgagcgctgcgaggagaactcctttggattc
agcgcctcggggtgcaaaccctgtgactgtgaccctgagggctcggcctcggctcagtgt
caggacgacgggcgctgcgagtgtcggccgggattcgtcggatctcgctgtgatatgtgt
gaggaaaactactactacaaccgctcagcgcccggctgccagcagtgcccgtcctgctac
agcctggtccgggacaaggtgaaccagcagcggcagaagctgcaggagctccagactctg
atggaccacctgggctcggggcaggagacggtcagcgaccaggccttcgaggaccgactg
aaggcggcagagaggagcatcgaggagctgctgcaggaggctcagagcagcaaggacgtg
gaccgcgggctgctggagcgtctgagcaccatcaacggtactctgagcgctcagtggaac
cgcctgcagaacatccgcagcaccgtggacgacaccgggctccagtcggaccgagccagg
tccagagtgagagacgcagagagtctgatcgataaagcccgccacgaactggacaaagcc
aaggaggccgtggccaaagtggacatcaaagccccgagtggcagcggagacccgaacaac
atgacactgctcgctgaggaggcccgcaacctggccgacaagcacaaaatggacgccgat
cagatcgagaagatcgctaaagacgccaacgacacgtcgactcgagctcacgagctgctg
ctgaagactctggagggcgagagccagacgagccgcgagatcgacgagctcaacaagaaa
tacaccgaggcgaaggagctggcgaagagtctggagaagcaggcgaacaagtgcaggcgg
aggccgaggacgccgggaaccgagacgctgaagatcttcgccaaacctcacctccatccc
gccgttcaacaccaagactctggaggatga
DBGET
integrated database retrieval system