Trematomus bernacchii (emerald rockcod): 117469988
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Entry
117469988 CDS
T09643
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117469988 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117469988 (trip12)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117469988 (trip12)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
HECT type E3
117469988 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
117469988
NCBI-ProteinID:
XP_033970375
LinkDB
All DBs
Position
Unknown
AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRPNSKASKAT
ASSATGQSRGHSSRRSGLSLSVASFVLQDDPEAAGTSEQERPGQQSKSEGPRGLKRSEAP
DQISTFGPTPAKKPKALPAPRDNTSETKKGPAKSKKRPLASEPPASSGRGQSKKSGAAGA
SPIPKRKKADSLPGLSSTAGPLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTAGTNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKAASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKPETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGGHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADAELLKDVLRNHSVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSETESFLVTSPPKACP
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRTAG
VSGLARAPPKDSISNNRDKIKAWIKETASKFVERYFSSENVDGSNPALNVLQRLCTATEQ
LNLQVDGGIECLVEISSIVSESDVSSFEIQHSGLVKQLLVYLTSSSDRELLSRDVRLKRF
LHVFAGCPVPGMELAGRLDPTENAPYLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPSVVNPLETYLTSEPPENITFEDPSLEVNLLLRVLHSISRFWFYLYENAVC
KEIIATSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRA
MLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYMFSSR
GLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMSIS
SHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQGLESLNMNGCSVEDLGLDF
TLPGYPNIELKKGGKDFPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIDIM
REKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagtcgcaggaaggttgcagtcagagcaagttaaa
cataaagcaaattccccacccgaaagtagaagacctaattctaaggcttccaaagccaca
gccagctcagccactggccagtccagagggcacagctcaagaagaagcggtctttctctg
tcagtggcttcatttgtgttgcaagacgatccggaggcagcagggacatccgaacaagag
cgaccaggccaacagtcaaagagtgaaggcccccgagggctgaagcgaagcgaggctccg
gaccaaattagtaccttcggacctacccctgccaagaagcccaaagcactcccagcaccc
agagacaatacctctgagaccaagaaaggaccagcgaagtccaagaagcgaccacttgct
tcagaaccacctgcatcgtcaggtcgaggccagagcaagaagagcggggccgccggggcc
tcaccaatcccgaaacggaagaaagcggactccctccccggtctaagtagcaccgctggg
cccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtcaaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacggactcctcctcttctgcctccacc
tcttcctcttcctccaccgcaggcaccaacagcgccaccacgcagggcgcccgagtcaaa
cagggaaaagatcagaccaaggcacggcgctctcgctcggcctccagcccctccccacgc
cgcagtacccgtgacaaggagcaggccaaggccgccagctcttccaagttcgagtgggca
gctcgcttcaaccccaaagtcaacctgccaaaacccaaactgtccttgcccggatcctcc
aaacctgagacctccaaacctgggccatcaggattacaagctaaactagcaagtttgagg
aaatccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggccgactctgacaacaaccag
gacggggccaactcgtcagctgctcgcactgatgaggcatcacaaggggcttcagcttca
agctcagttgctggagcagtgggcatgaccacctctggagagagtgagtctgatgactct
gaaatgggaagacttcaagccctactggaggccaggggtctccccccacatcttttcggg
cccctgggaccccgcatgtcgcagctgtttcacaggaccattggcagtggagcgagctcc
aaggctcagcagctcctgcagggtcttcaggccacaggcgacgagtcccagcagctccag
gctgccatcgagatgtgccagctgctggtgatgggcaacgaggaaacactcggtggattc
cccgtcaagagtgtggtgcccgctctgattacactgttacaaatggagcataactttgat
attatgaatcacgcctctcgtgcactcacatatatgatggaggcgctcccccgctcctct
gctgtggtggtcgatgcgatccctgtcttcctggagaagctgcaggttatccagttcatt
gacgtagcagagcaggccctgaccgccctggagatgttgtcaaggcgacacagcaaagcc
attttgcaggctggggggcttgctgattgcctgctgtacctggagttcttcagcatcaac
gctcagaggaacgccctggccatcgcagccaactgctgccagagcatcactccagacgag
ttccactttgttgctgattctctgccactgttgactcagagactcacacaccaggataaa
aaatccgtggaaagcacttgcctctgtttcgccagactggttgacaactttcagcacgag
gagaaccttctgcaggaggtggcgtcccgtgacctgctgaccaacatccagcagctgctg
gtggtgacgcctccggtgctcagctcggggatgttcatcatggtggtgcgcatgttctcc
ctgatgtgctccaactgcccctgcctggcagtccagcttatgaaacagaacatagcagaa
actctgcgtttcctcttgtgtggtgcatcaaacggcagctgccaggagcagattgaactg
gttccccgcagcccccaggagctctacgagctgacctccctcatatgtgagctgatgccc
tgcctgcccagagagggcatcttcgcggtggatgtgatgctgaagaagggcagcgctcag
accacagagggcgccatctggcagtggagggacgaccgcggactgtggcatccctacaac
cgcatcgacagccgaattattgagacagcacaccagaacggggaggatgagatcagcttg
tcaaccctgggccgtgtgtacacaattgactttaactctatgcagcagatcaatgaagac
acaggaacagcacgtggtatccagaggaaacccaatcctcttgccaaccccaacacaggg
ggtcaccaggaggttcgtcgagaggatgcacgagcccagttgatgaaggaggaccccgag
ctggcaaagtgctttatcaaaactctgttcggggtcctgtacgaggtgtacagctcctca
gccggccctgctgtcagacacaagtgccttagagccatcctcaggatcatcttctttgct
gatgcagagctgctgaaggatgtgctgaggaaccactctgtgtccagtcacatcgcctcc
atgctgtccagccaggacttgaagattgtagtggggtctctgcagatggcagagatcctc
atgcagaagctgcctgatgtcttcagtgtgtatttcaggagagaaggtgtgatgcaccag
gtgaagaacctgtccgagactgagagctttctagtcactagtcccccaaaggcttgcccc
agtggtactgccagtttgtgcacgaccaccatcagcactgcatccactacatctgctaac
aatgcaactcctgacctgggctcgcccagcttccagcacagcatggacgactccctggac
ctcagcccacaggggcggttaagtgacgtcctgaagaggaaacggctacccaaaagagga
cctagaagacctaaatactctcccccaagagacgatgataaagtagacaatcaggccaag
agccccaccagtactcagtcccccaaatcctccttcttggccagtcttaacccaaagacc
tggggcaagctgggagcccagaccaacaacgccaactcagagccgtcgcgcacagcgggg
gtcagcgggctggcgagggccccgcccaaggactcaatttcaaataacagagacaaaata
aaagcctggatcaaagaaacggccagtaagtttgtggagcgctacttcagctctgaaaat
gtggatggcagcaaccccgcactgaatgtactccagagactttgcacagccaccgagcag
ctcaacctgcaggtggacggtggcatcgagtgcctggtggagatctccagtattgtatca
gagtccgacgtgtcgtcctttgagatccagcacagcgggctggtgaagcagctgctcgtc
tacctgacctccagcagcgacagggagctgctcagccgcgacgtccggctcaagaggttc
ctccacgtcttcgctggctgtccggttccaggcatggagctggcaggtcgtctggacccg
acagagaacgctccttacctggcgctggtgcacaaaatgaacagctgcctgagccaaatg
gagcagtttcctgtcaaagtgcatgatttccccagtggcaacggcaatggcagcaggggc
tctcaggcgctgaagttcttcaacacacatcagctgaagtgccagctgcagagacaccca
gactgcactaatgtgaagcaatggaagggcggccccgtgaagatagaccccctggccctg
gtgcaggccatcgagagatatctggtcgtcagagggtacggccgaatcagggaagaggat
gaagacagcgatgacgatggttcagatgatgaaatcgatgaatcactggcggcgcagttc
ctgaactcgggcagtgtgcgtcacagactacagttctacatcggtgaccacctgctgccg
tacaacatgacggtgtaccaggccgtgaggcagtacagcctgcaggcggaggaggagcga
gagtcgacggacgacgaggcaaacccactcgggcgagctggcatttggaccaaaacgcac
acaatatggtataagcctgtgagagaggacgaggacggcagcaaagacgctgtgggtggg
aagcggggccgagcccagactgctcccaccaagacgtcccctcgcaacgccaagaagcag
gatgagctgtggcatgacggcgtgtgtcccagtgtcgtcaatcccttagagacatacctc
acttcggagccaccggagaacattaccttcgaagacccctctttggaggtcaacctgctg
ctgagggtcctgcactctatcagtagattctggttctacttatatgaaaatgctgtgtgt
aaggaaatcatcgcgaccagtgagttcattaacagtaagctgacagccaaagctaaccga
cagcttcaggacccgctggtcatcatgacggggaacatccccacctggctcatcgagctc
ggaaagacctgtcctttcttcttccccttcgacacccggcagatgttgttctacgtcact
gccttcgatcgggacagagccatgcagcgtctactggacacaaaccctgagatcaaccaa
tcagattctcaggacagcagggtggccccacgtctcgacaggaagaagaggacgataaac
cgcgacgagctgctaaagcaggctgagtctgtgatgcaggacctgggcagctccagggcc
atgctggagatccagtatgagaacgaggtgggcacaggtctgggcccgactctggagttc
tacgctctggtgtctcaggagctgcagcgcgccgacctcggcctgtggagaggggaggag
gtcactctggccaatcctaaaggaagccaggagggaaccaagtacatgttcagctccaga
ggactgttcgctgttcccttcggcaggacaaccaaaccagcacacatagccaaaatcaaa
atgaagttccgattcttaggaaagctgatggccaaagccattatggacttcagattgctg
gaccttcctctcgggctgcccttctataagtggatgctgcggcacgagatgtccatcagc
tcccacgacctggtgaacatcgaccccggggtggccaagtccatccagcacctggaggac
atcatccgccagaagaagcgactggagcaggaccggtcacagacgagggagaccctgcag
cagggcctggagagcctgaacatgaacggctgctcagtggaggacctcgggctggacttc
accctcccaggataccccaacattgagctgaaaaagggcggcaaagacttcccggtcaca
atctacaacctggaggagtacctcaggttggtggtgtactggactcttaatgaaggagtg
tccagacagtttgagtcatttagggaaggctttgagtcggtcttccccctgcatcacctg
cagtatttctatccagaggagctggatcagctgctgtgtggcagcaaatcagagacgtgg
gacgtgaagacgctgatggagtgctgtcgaccggaccacggctacacacacgacagccgc
gccgtacggttcctgttcgaggtgctgagcagcttcgacgccgagcagcagagactcttc
ctgcagtttgtcacaggaagccccagactgcccgtcggtggtttccggagcctgaacccc
cctctgacgatcgtgaggaagacgttcgagtcgacggagaacccggacgacttcctcccc
tcggtgatgacgtgtgtcaactacctgaagctgcctgactactccagcattgacataatg
cgagagaaactgttgatcgcggctcgagagggccagcagtccttccacctctcctga
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integrated database retrieval system
