Trematomus bernacchii (emerald rockcod): 117470010
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Entry
117470010 CDS
T09643
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117470010
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117470010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
117470010
NCBI-ProteinID:
XP_033970418
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MENLTPEQWREIMNRKMRFPPELIVAIQEGKIEQLRGLLKTGDGILRQLEESEDRQWREA
LNLSIRLGNESCMDVLLQGIKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDQSIDNSQFAPGVTPLTLACQKDLYDIVAMLTRKGHVIPWPHKISCICLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSEDAMLRAFTLSRELRMLSQKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLEEQAFDEGIPNLSRLRLAVNFN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLFVSMVIFLTMPFLCLIYWVAPKSKVG
KLLKIPVIKFLLHSASYLWFLITLLGESITMEMYRTKFASRHQDMLHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLGMYLASFALRLLIMLKGLFVCHGHDVTEECAYF
TQAVREDWRQEDPQLLAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVLSPHLGRFNETFHFLFWTMFGVANQDYVDMPQFVVAEF
VGRILYGIFTLVIVIVLLNMLIAMITNTFQKIEDDADVEWKFARSKLYLSYFREGLTIPV
PFNIIPSPKAFYYMLRGLFRLICCCTSNSENKYPPIPSMSNDKEPEEDQIPYRQQVIRAL
VQRYIESARREFEENKRKDIGNRITLLTKTVSRMHGDIKVVQQLLAEGHSTSGPLTNAGS
SFLGKYIIGAKNNFVGFNCKPDENASSIKVPVHNGEREGVEDQIETDNNENVVGDCEAEG
SKEVTDCDVVKMEEGRAKTEVGDQKEAEKKEQMEADNRENTEHEVKVVAGTSLNHLEKES
KPKAGKGKEDEKLTGGKVSETHTDTTPDTNVSNTKVEPTWKQGQKFELEAAGEIAVKEGN
AKPGATKTVTSPTGSSLSQDTGFGSEEGDGAIVGTVVRP
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagataatgaaccggaagatgcgcttccct
ccggagctcatcgttgccatccaggaggggaagatagagcaacttcgtgggctgctgaag
accggcgacggcatcctccgccagctggaggagtccgaggaccgccagtggagggaggcc
ctcaacctgtccatccgcctgggcaacgagagctgcatggatgtcctcctgcaggggatc
aagttcgacttccggcagattcacgaggccctgctcgtggccgtggacaccaaccagccc
cgggtggtgaagcgcctgctggaccgcctcgaccaggagaaaggaaacaagatggacgtg
cgctccttctcccaggccatctttgaccaatccattgacaactcccagtttgctcctggt
gtgactcctctgaccttagcctgccagaaggacctgtacgacattgtcgccatgctcacc
cggaaagggcacgtcatcccgtggccgcacaagatatcctgcatctgtctggagtgtcgt
aacggccggcagtacgacctgctgaagttctccttgtctcgcatcaacacctaccgcggc
atcgccagccgcgcctacctgtccgtcacctctgaggacgccatgctcagagccttcact
ctcagcagggagctccgcatgctctcgcagaaagagccagagttcaagcctcagtacctg
ggcctggaggagctctgtcaggagtttgccgtggagctgctgggcatgtgtcgtaaccag
agcgaggtgaccaccatcctgaacagctgcggagacgagagccaggactccttggaggag
caggccttcgatgaggggatccccaacctgtcccgcctgcggctcgctgtcaacttcaac
cagaagcagtttgtggcccaccccatctgccagcaggtgctctcctctatctggtgcggg
aacctggctggatggcggggcagcaggacggcctggaagctgtttgtctccatggtgatc
ttcctcaccatgcccttcctctgcctcatctactgggtcgctccaaagtcaaaggtggga
aagttactaaagattcctgtgatcaagttcctcctgcactcagcctcctacctgtggttc
ctcatcacgttactgggagagtcaataaccatggagatgtatcgaaccaaatttgcttcc
cggcatcaggacatgctgcacagctccttccacatggtgtgggtggtcgggttcttctgg
tacgagtgtaaggaggtgtggatcgaggggctgcgcagctacttcctggactggtggaac
tgcctggacgtgatggtgctcggcatgtatctggcctccttcgcattacgtctgctcatc
atgctcaaaggcttattcgtgtgccatgggcatgatgtcacagaggagtgcgcttacttc
actcaggctgtgcgtgaggactggcgtcaggaggacccccagctgctggccgaggttctg
tttgcagtgaccagcatgctgagcttcacgcggctggcctacatcctgccagctcacgag
tccctgggaactctgcagatctccatagggaagatgatcgatgacatgatgagatttatg
tttatattgatgatcatcggaacagccttcctctgtggcatcaacaatgtctatgttcct
tatgtcctctctccacatcttggcaggtttaatgagacgttccacttcctcttctggacc
atgtttggcgtggctaaccaggactacgtggacatgccccagtttgtagtggcggagttt
gtaggaaggattctgtacggcattttcaccctcgtcatcgtcatcgtcctgctcaacatg
cttatcgccatgatcaccaacaccttccagaaaattgaggatgatgcagacgttgagtgg
aagtttgcccgctccaagctgtacctcagttacttcagagagggcctcaccattcccgtg
cccttcaacatcatcccctcacccaaagccttctactacatgttaagaggtctcttcaga
ctaatctgctgctgcacttcaaattctgagaacaaatatcctcctattccctctatgagc
aatgataaggagcctgaagaggaccagataccgtaccggcagcaggtgatcagagctctg
gtgcagcgctacattgagtcggcacgcagggagttcgaggagaacaagaggaaagatatc
ggcaatcggatcactttgctgaccaaaacggtcagcaggatgcacggggacatcaaggtg
gtccagcagcttctggcggagggacactcaacaagtggcccactgaccaatgcgggctcc
tcttttctggggaaatacatcattggtgccaaaaacaattttgtaggatttaactgcaaa
ccagatgagaacgcttcatcaatcaaagtgccagtgcacaatggagagagagaaggggtt
gaagatcaaattgaaacagataacaatgaaaatgttgttggtgattgtgaagcagaagga
tcgaaggaggtgacggactgtgatgtggtgaagatggaagaggggagagctaaaactgag
gtaggggatcagaaggaagctgagaagaaagagcagatggaagcagacaatagagaaaat
actgaacatgaagttaaagtggtagcagggacaagtttgaatcatttagaaaaggagtct
aaacccaaggcaggaaaaggaaaggaagatgagaagctgacaggggggaaggtgagtgaa
acacacacagatacaactcctgacacaaatgtaagcaacacaaaagtggagccaacgtgg
aagcaaggtcaaaagtttgaacttgaagcggcaggggaaattgctgtcaaagagggcaat
gcaaagcctggagccacaaaaaccgtcacctccccaacaggaagcagcctctctcaggac
accggcttcgggtcagaagaaggggacggggcgattgtagggacggtagtgaggccttag
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