KEGG   Trematomus bernacchii (emerald rockcod): 117470065
Entry
117470065         CDS       T09643                                 
Symbol
igsf5b
Name
(RefSeq) immunoglobulin superfamily member 5
  KO
K06786  junctional adhesion molecule 4
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04517  IgSF CAM signaling
tben04530  Tight junction
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117470065 (igsf5b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117470065 (igsf5b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tben04515]
    117470065 (igsf5b)
Cell adhesion molecules [BR:tben04515]
 Immunoglobulin superfamily
  CTX family
   117470065 (igsf5b)
SSDB
Motif
Pfam: Ig_3 C2-set_3 I-set ig C2-set_2 Ig_2 C1-set Porphobil_deamC Tcell_CD4_C Gly-rich_Ago1 TMEM132_C HisKA_4TM
Other DBs
NCBI-GeneID: 117470065
NCBI-ProteinID: XP_033970479
LinkDB
Position
Unknown
AA seq 361 aa
MDFFCLLLLLLSCSIQVGAAMKLSPEALTVLRGGDARFTCTPSKTKWTVMVWLLDGTAVL
TISKEFGVLPSVHPNVTAEKGSVSSGDSWVFVLKNTERRNQGQLTCDLQGSDRRTASLFV
QEKGSVKVIGDSTLVFKGQSVLFGCHAAGWYPLPTLQWHVNNKTVSRGDYNISSEESGES
LFTVSSNLSVTAAKSSYVDCLASVSALQTPLRSSFRLTVVAEVVQLEDGCTVPLAAMASL
SAILLLLLLCICTVLCYRHRRQAKQSPQEAAIRFGQSVSGRSLVAEATGGKVNLGYSSEG
PTDPAYSELNLETRRQQQDFVSVLKVPDAVSSSSRSLHDDSQAQVCLSEETAKNVRRITT
V
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggacttcttttgtctgttactgctcctcctctcatgcagcattcaagttggagctgcg
atgaagctgtctccagaagcgctgaccgtcctgcgggggggggacgcgcggttcacctgc
actccctccaagaccaagtggaccgtcatggtgtggttgctggacggcacggcggtgctc
accatctccaaggagtttggcgtcctgccgtccgtccaccctaacgtgacggcagagaaa
ggcagcgtctcatcaggagacagctgggtgtttgtgctgaagaacactgagaggcgcaac
cagggacaactgacctgtgacctccagggcagcgacaggagaaccgccagcctgtttgta
caagaaaagggcagcgtgaaagtgatcggggactctacgctggttttcaagggtcagtca
gttctgtttggatgccacgctgcgggatggtaccctctacccactctgcaatggcatgtg
aataacaaaacagtgagccggggtgattacaacatcagcagtgaagagtcgggggagagc
ctcttcactgtgagcagtaacctcagtgttacagcagcaaagagctcttatgtggattgt
ctggcctctgtgtctgcactccaaaccccactgaggagcagcttccgcctgacagtggtg
gcagaggtggtgcagcttgaggacggctgcacggtgcctctggcagcgatggcctccctc
tctgcgattctgctgctcctcctgctctgcatctgcactgtcctctgctatagacacagg
agacaagcaaagcagagcccacaggaggcggcaataaggtttggccaatcagtgagcggg
agaagcttggttgctgaggcgacaggggggaaggtcaacctgggatactcgagtgagggc
cccacagacccagcttacagcgagctaaacctggaaactcgtaggcagcagcaggacttt
gtcagcgttctcaaggtccccgatgcggtgtcctccagcagccgctctctgcacgacgac
agccaggcacaggtgtgtctctcagaggaaaccgccaagaacgtcaggagaataaccaca
gtttaa

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