Trematomus bernacchii (emerald rockcod): 117470084
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Entry
117470084 CDS
T09643
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117470084 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117470084 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117470084 (ncor1)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117470084 (ncor1)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
117470084 (ncor1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
NCOR1_N
Motif
Other DBs
NCBI-GeneID:
117470084
NCBI-ProteinID:
XP_033970521
LinkDB
All DBs
Position
Unknown
AA seq
2495 aa
AA seq
DB search
MSSSSGYPPTQGSFGNEQGRYPAHSVQYSFTGSRHQQDFSIPDYRTHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSAQSEHEALDSKRPRMETVAEAHISRTPSTAGGILMPI
GHSVQDSLRTSADVKKDSQFSAKVESTSQGGHALHMGDDQDASPSKLSKEELIQSMDRVD
REIAKVEQQIFKLKKKQQQLEEEAAKPMEPERPATPPPVEHKHRSIVQIIYDENRKKAED
AHKVLEGFGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKICQ
RYDQLMEAWEKKVDRMENNPRRKAKDGRTREYYERQFPEIRKQREQQERFQRVGQRGTGL
SATIARSEHEISEIIDGLSEQENNEKQMRQMSVIPPMMYDTEQRRVRFINMNGLMDDPMK
VYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNYKT
LVRRNYGRRRGRNQVNQITRPSQEEKSDEKNEEEKSEKSEKKEDEEKKDEEEKDEKEDSR
DIGKDKDKCDVGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPPA
PEPAMPDPPLLPKPDPMQKSLKEPAKPQTPVASMDANKAGAGETGETSRWTEEEMEVAKK
GLVEHGRNWIAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEG
LANASPDDEDDDDNADDSEGGDNSSDTESAPSPSQSGDSKRADGAAGDAHCSDQDKGQAS
NGKGLEPLYGGLCVKEEKSPESESGSQEEKARMGPYGGSVHPKTEPQDTDMNSGEVQVKM
EPEMKERGEKGDHSERHRELHSDNDSSATCSADEDVEAEPERQRMFSMEKPSMLNPQGSV
LVSSPKHAQLNIQQMQKRAAAIPPMMPGSYGPGGVPMSGFAMLQHQIKAVHDSAHQEEKQ
RQDHGDPERRPPFNTRSPTVIDRDGKPLPYMPYEMKLALEQEMHSGRPGSPYRLSPREMS
RASPQPDPNAPNASRYSVPPVLHPAPNQLVQSMADGVRVTFSRPSRPPNIPSPPPLIPTT
KPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSAVGSISLGLPRQQDPNKPGAAVPS
MQDGRGNPAKMGEGLAKRGSITQGTPALSQPIMAADLLKGTITKLATEDMSNPDKARGDQ
LSKGHVIYEGKSGHILSYDAIKNPRENTRSPRTALELKRTYDMMEGPLGRGHLGREGAPF
EGLISRALPREGQHGDSKERPMMTGSIMQGTPRTAAETYEDAMKYGKQIKRESPPIRSFE
GGIGKGKPYEGVNTIKELGRSIHEIPRQEQSGQDVCKTPEMSDRRGMEGSMSQIHPHNQS
TIKHNVKSLITSPNKLPHNMPQLDAMERAKYEEGKAVRQSVLNSTSVLRSTHQEANKSQL
SPSMYEDANARRTPVNYSTNPGSRGSPMMGRTPEGVMSSAKSAAHERKNAMTPTQRENIP
SKSPVTGGDPVGSHSPFDPQHRHIVPGEMYRAHLPPHLDPTMAFHRVLDPAFMFPRQPSP
TGYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQLPYAAGPGGIIDLAQ
MPPTILLPHPGGTGNPTLERIAYLPGAQPPFPSRAFNPNSISPGHQAHLAAAVAASAERE
RERERDREQQEKEREKEREREQREREREIRERERERERTNEYMRGGGAEQPGRPGSRGYL
HSPSPSLRTQEVVVQQRPSIFQGKSVITALMPQTAAATATSQSGSRYSTAADALAALVDA
AASAPQMDVAKVKDNKQEREDEMSRRAASMSEQQQQQQHLQQQQHHLQQQLQQQHQQQQQ
HQQQQQHQQQQQQQQHQQHQQQQQQQHQQQQQQQQQHQHQQHQQQQQHEAERRSMQSPYG
AMSLPGGKPHSAYSEGPGAKDKGPPTSKSRIEEELRTRGKTTITAANFIDVIITRQIASD
KDSRERGSQSSDSSSSLSSNRYDNTAGGTIEVISPASSPVQPQQEKPEEVQPQAAAAGMR
AYDMSRYRQSAEPPQQPPSSQGEGYSQVPKTHRFMTLADHISHIITQDFARNQDPPPVSS
SASATFQSSVPSVSSSGRAKGHSRYSPENQGQASHHQRSTSRVSPENAPDKPRARPGKSP
ERSGRQMENYEPISPPQSYQGMEKQEAAGHPPQRREAENSEIRNDSRSPGSVSYLPSFFT
KLENTSPMVKSKKQEIFRKLNSNSGVGDSDVGNAQPGTEIFNLPAVTSSSSINPRNNSFS
DPANNLGLEDIIRKALMGNLEERPEEHQGGQSANNNTPSAGSEVRQEANPSPSMGKQKQS
KANSRKTKSPNLGQAYAGGERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGSMQFPY
NPLTMRILSSTPPTSIASPAIQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ
QQQLQPPPAGAPVAQQRVWQSLLSEQYETLSDSDD
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagctcgggctacccccccacccaggggagcttcggcaacgagcagggccgc
tacccagcacattctgtccagtactccttcaccggctcgcgtcaccagcaggatttctcc
atcccagactatcggactcacatgcaagatcctcagggtcgaaggagaccatcgttattg
tctgaattccaccctggaactgaaaggcctccagagagacgccatggttacgaacagcag
tttcactcggcgcagtctgagcatgaggccttggattctaaacgccctcgcatggagact
gttgccgaggctcacatctcacgaacaccttccactgccggggggattctcatgcccata
ggccattcagtacaggacagtctgagaacctctgcagacgtcaaaaaggactctcagttc
tctgccaaagtagagtccacttcccaaggaggacatgcactacacatgggggatgaccag
gacgcttctccctctaaactgtccaaggaggagctgatccagagtatggaccgtgtggac
cgagagatcgccaaagtggagcagcagattttcaagctaaagaaaaagcagcaacaactg
gaagaggaagcagcaaagccgatggagccagaaaggccagcgacccctcccccagtggag
cacaagcatcgcagcatagtccagatcatctacgatgaaaacaggaaaaaagctgaagat
gcccataaagtcctggaaggttttggtcctaaggttgagctgcccctctacaatcagcca
tcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtgatgaggaagaagctg
attctgttctttaagaggaggaaccacgctcgtaaacagagggaacagaagatctgccag
cgctacgaccagctgatggaggcgtgggagaagaaggttgatcgaatggagaataacccc
agacgcaaagccaaggacggcagaacacgggagtattacgaaaggcaattccccgagatc
cgcaagcagagagagcagcaggagcgattccagagggttggacaaagaggaacaggcctt
tctgcgacaatcgcaagaagcgagcatgagatttctgaaatcatagatggcctttctgag
caggagaacaacgagaaacagatgagacagatgtcagtcatccctcccatgatgtacgac
actgagcagaggagagtgaggttcatcaacatgaacggcctgatggatgaccctatgaag
gtgtacaaagcccggcagtttatgaatgtttggaccgaacatgagaaggagatctttaag
gagaagtttgtccaacacccaaagaactttggcctaattgcctcttatctggagagaaag
tgtgttgccgactgtgtcctttactactacttgaccaagaagaaccacaactacaagacg
ctggtgaggcggaactatggcagacggagaggacgcaaccaggtaaatcaaataacgcgt
ccctcacaagaagaaaagtcagacgagaaaaacgaagaggaaaaatctgagaaatctgag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacgttggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgccgtaagggaaggatcacc
acacgctccatggccaatgaggctgcatctgtggcggctgaggaggcacctccccccgcc
cccgagcctgccatgccagatcctccgctgctccccaagccggatccaatgcagaagtca
ctgaaggagcctgcaaaaccccagactccagtagcttccatggatgctaacaaagctggt
gcaggtgaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaa
gggctagttgaacacgggcgaaactggatcgccattgccaaaatggtgggcaccaaaagc
gaggcacagtgcaagaacttctatttcaactacaagagacgtcacaacctggacaacctg
ctccagcagcataagcaggatacacggcgggcacgtgccgataggtctcaaggtgaaggt
ctcgctaatgcgtcacccgatgatgaggatgacgacgataacgccgatgacagtgaaggt
ggtgacaacagctccgatacagagagcgctccctccccctctcagtctggagactcgaag
agggcagacggcgctgcaggagatgctcactgctctgatcaggacaaaggtcaagccagt
aatggaaagggcctggagcctttatacggaggactctgtgtaaaggaggagaaaagcccc
gagagcgagagcggatctcaggaggagaaggccaggatgggtccctacggaggctcggtg
caccccaaaaccgaacctcaggacacggacatgaactccggagaggttcaggtgaagatg
gagcctgagatgaaggagagaggagagaaaggagatcacagcgagaggcacagggagctc
cactcagataatgactccagcgccacctgcagtgctgacgaggatgtggaagcagagcct
gagagacagagaatgttctccatggaaaagccttcgatgctcaaccctcagggctcggtg
ctggtgtcttcacccaagcatgcccaactcaacatccagcagatgcagaagagggcagct
gccatcccacctatgatgcctggttcttatggccccggtggtgtgccaatgagtggcttt
gccatgttgcagcaccagatcaaagcagtgcacgattcagcgcaccaggaagagaagcag
cggcaggatcacggagacccggagcgaagaccgcccttcaacacccgcagccccactgtt
atagacagagatggtaagcccttaccctacatgccttatgaaatgaagctggctctggaa
caggagatgcactctggtcggccaggctctccctacagactctcccccagggagatgagc
agagcctcacctcagcctgaccccaacgcccccaatgcctcccgctacagtgtgccacca
gtcctccacccggcccccaaccagcttgtccagagcatggcagacggagtccgcgtgacg
ttcagcagacccagtcgacctcccaacattccctctcctcctccactcattccaaccacc
aagcccaccgacaagccctccttcatccaaggaggctccatatcccagggaactcccggc
acatacctgccgtcccatgctgtctacggtccagaggggactaagagcgcagtgggctcc
atctctttaggtctgcctcggcagcaggatcctaacaaacctggagctgcagttccatcc
atgcaggacggcaggggcaacccagcaaagatgggcgagggtctggctaagagagggtcc
ataactcagggcacgccagccctttcccagcccatcatggctgctgacctcctgaagggc
accatcacaaagttggccacggaggacatgagcaacccagacaaggctaggggagaccag
ctgtctaaaggtcatgtcatctatgaagggaagagtggtcacatcctctcctatgatgct
atcaagaacccaagggaaaacacccgcagtcccaggacagcccttgagcttaaacgcact
tacgacatgatggagggacccttgggcaggggacaccttggcagggaaggagctccattc
gaggggttgattagcagagccttgcccagagaaggtcaacatggagattctaaggaaaga
ccaatgatgactggatccatcatgcaaggaacacctagaacggctgcagagacttatgaa
gatgccatgaaatatggaaagcagataaagcgtgagagccctcccatccgctccttcgaa
gggggaattggcaagggcaagccctatgagggagtcaacaccatcaaagagttgggacgc
tccattcacgaaatccccagacaagagcagtccggccaggatgtctgcaagacccccgaa
atgtcagacaggaggggtatggagggctccatgtcccagattcaccctcacaaccagtcg
accatcaagcacaacgtcaagtccctgatcaccagtcccaataagcttccccacaacatg
ccccagctcgatgccatggaaagagccaaatacgaggagggcaaggcggtccgccaatct
gtgctcaactccacctctgtcctgcgctccacccaccaggaggctaacaagtctcagctt
agcccaagcatgtacgaggacgccaacgctcgcaggacccccgtcaactacagcaccaac
cctgggtccagaggatcacccatgatgggacgtacacccgagggtgttatgagctctgcg
aaatctgctgcacatgaaagaaagaatgccatgaccccgacacagagggaaaatatccct
tccaagtctccagtgacgggcggtgaccctgtgggctctcacagcccctttgacccccag
caccggcacattgttcctggagaaatgtaccgagcacacctgcctccacacctggacccc
accatggccttccacagagtgctcgatcctgcattcatgttccccaggcagccgtctcca
accggctaccacaacacgtaccagctgtacaccatggagaacacacggcagacgatcctc
aatgattatatcacttcccagcagatgcaagtcatccgacctgacatggcccgagggttg
tcaccgcgggaacagctcccttacgcagccggacccggagggataattgatctagcccag
atgcctccaactatcctgttacctcaccctgggggaacaggtaatcccactttggaacgc
atcgcctacctccccggagctcagccccctttcccttctagggctttcaacccaaactcc
atatcgccaggccaccaagcccaccttgctgccgcggttgctgccagtgcggagagggaa
cgggagagggagcgtgaccgggagcagcaggagaaagagcgagagaaggaaagggagagg
gagcagcgagagagggaacgggaaatacgggaacgagagcgggaacgggagagaaccaac
gaatacatgcgcggaggtggagcagagcagcccggccggccagggagtcgaggttatctg
cactccccctccccctcgctcaggacgcaggaggtggtggttcagcagcggcccagcatc
ttccagggcaagagtgtcatcaccgctctgatgcctcaaacagcagcagcaacagcaaca
tcacagagcggctctcgctacagcactgcagctgacgctctggctgctctggtggacgct
gcagcctccgcccctcagatggatgtcgccaaggtgaaggacaacaaacaagaacgggaa
gacgaaatgtcgaggcgagcagccagcatgtccgaacagcaacagcagcagcagcatctg
cagcagcaacagcatcatctgcagcagcagcttcaacagcagcatcaacaacaacagcag
catcaacaacaacagcagcatcaacaacaacagcagcagcagcagcatcaacagcatcaa
cagcagcagcagcagcagcatcaacaacaacagcagcagcagcagcagcatcaacatcaa
caacatcagcagcagcagcagcacgaggcagagaggcgctccatgcagtcaccatacggt
gctatgtctctgccagggggtaagcctcattcagcttactctgaggggcccggagctaag
gataagggccctccaacgtcaaagtcacgcatcgaagaggagcttcggactcgtggaaag
acgactatcacagcagctaacttcattgacgtcatcatcacgcggcagatagcctcggac
aaggactcaagagagcgaggctctcagagctcggactcctccagcagcttgtcatctaat
cgatacgacaacaccgccggaggaaccatcgaggtgatcagtcctgctagttcaccagtc
caaccccaacaggagaaaccagaggaagtgcaaccacaggcagcagcagctggcatgcgg
gcctatgacatgagtcgttaccggcaatctgcagagcccccccagcagcccccctcttcc
cagggtgaaggctactcccaggttcccaagactcaccggttcatgaccttggcagaccac
atttcgcatatcatcacccaggacttcgccaggaatcaggaccctcctcctgtctcttcc
tcagcttcggcaacattccagagctcagtgccatccgtgtcctcgtcaggccgggccaag
gggcacagccgctacagtcctgagaatcagggccaggcctctcaccaccagagatccacc
agcagagtttccccagagaacgcccctgacaagcccagagcgaggcccggtaaatctcca
gagcgaagcggcagacagatggagaactatgaacccatttctccaccacagagctaccag
ggcatggagaaacaggaagcggccgggcatccaccccagagacgagaggctgaaaactct
gagatcaggaatgattcgcgctctccggggagtgtaagctatctgccttccttcttcacc
aagctggaaaacacctcacctatggtaaaatccaagaagcaggagatctttcgtaagttg
aactccaactctggtgtcggtgattctgatgttggaaatgctcaaccaggcacagagatt
ttcaacttgcctgctgttactagctccagcagcatcaacccaaggaataactcatttagt
gacccggccaataacctgggcctagaggacatcatccgcaaagccttgatgggcaacctg
gaggagaggccagaggagcatcaggggggtcagtctgccaacaacaacacacccagcgcg
ggcagcgaagtccgccaggaggccaacccgtctcccagtatggggaagcagaagcagagc
aaagccaacagccggaaaaccaagtcccctaacctgggtcaggcctacgccggaggggag
cgtccctcctcagtgtcctccgtccactccgagggagattatcaccggcaagcccaagct
caaccccagtggagctgggacgaccgaccctcatccacaggatcaatgcagttcccatac
aacccgctgaccatgcgcatactgagcagcacgccacccacctccatagcttcccccgcc
attcagagccagcagcagcagcagcagcagcagcagcaacagcagcaacagcagcaacaa
cagcaacaacagcaacaacaacaacaacaacaacagcatcaacaacaacagcagcagcag
cagcagcagctgcagccgcctcctgctggagctccggtggcccagcagcgggtgtggcag
tctctactgtcagagcaatacgagaccctatctgacagcgacgactga
DBGET
integrated database retrieval system
