Trematomus bernacchii (emerald rockcod): 117470126
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Entry
117470126 CDS
T09643
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117470126 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117470126 (myo5b)
04131 Membrane trafficking [BR:
tben04131
]
117470126 (myo5b)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117470126 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117470126 (myo5b)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117470126 (myo5b)
mRNA cycle factors
P-body specific factors
117470126 (myo5b)
Membrane trafficking [BR:
tben04131
]
Others
Actin-binding proteins
Myosins
117470126 (myo5b)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117470126 (myo5b)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117470126 (myo5b)
BRITE hierarchy
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
RsmJ
INTS5_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
117470126
NCBI-ProteinID:
XP_033970577
EnsemblRapid:
ENSTBNG00005017813
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MAAEYNPYCKYTRVWIPDPSEVWKAAEIIRDFKEGEPELLLRLEDDTTLAYPVGPKGKPL
PFLRNPDILVGENDLTVLSYLHEPAVLHNLRVRFLEPNHIYTYCGIVLVAINPYDQLHIY
GEEVIRAYSGQNMGDMDPHIFAVAEEAYKQMGRDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHFHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASSSLPEFRELGLTSAEDFNFTSLGENIFIEGV
NDADDFKKTREALTMLGIKESSQSSIFKVVASILHLGNIEICAERDGESCHVSRDDLHLQ
HFSRLLGVELQQMEHWLCHRKLVTSSETYLKTMSKKQAENARNALAKHIYARMFDWIVEH
INKVLQSSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KELIPWTLIDFCDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYQKHLSSAHFQ
KPRMSNTSFIINHFADKVEYECEGFLEKNRDTVYEEQINILKASQFQLVADLFNEKEDVV
PKSSRVNVRPAKPTPRPANKEHRKTVGHQFRSSLRMLMETLNATTPHYVRCIKPNDYKEA
FSFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLLKKSDMTLADKKLVCK
NLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRADRFRSACIRIQKTVRGWLQRVRFLK
IRKTAVTLQRYGRGFMARRHADFLRQTRAALICQKQLRMVRDRQAFLRVRRAAATIQAFT
RGMFTRRIFKEFLLHHKAMIIQRCVRGWLQRRKFQRSRAAAITLQCAFRCVRAKRRVQQL
KAEARSAQHLKKLNSGMENKIVQLQRKMDDKSKEQRFQNEQLLQVNSSLGGEVKLLQKKL
QEVSSLQQGGGGQLASLHDELQRLREELQEAHALRGKLQEEHANEKQGLTQRVEELQKEN
SLLKSEKEEMNQKILKLTRSSAEEGSRASLQEELDEERLRYQNLLKEVSRLEQKYENLKE
EQSFSKFAPGHRRDASTLSSQESDSNYTSISTSELGDTEDTLQHVEDVGVEAAALDLSVF
LKLQRRVRDLETERGRLQQQLERGGEHRSSEAPPLSEQDAADLTYTSLKLQDVEVENLKL
RKDLLSLQKAVSERAGLSDPTNELQESHALLMSQLRSANEELEARKEEVLILRTQIISSA
HKEQSPAHQKEQSPAHQIEQSPAHQKEQSPAHLKEQSPAHQKEQSPAHLKEQSSDGAIVS
EQGTLPEKQESVCAGECESKRLLEVQLQAQTRRHGDELTALHTQIELLKADIEKKQELLN
FTSSLSPEDRVEYSVQQEITRLTNDNLDLKELLEKLEKNERKLKKQLRIYMKKVQELEVS
QTERTRPPLSRQVTVQRKEKDFEGMLELHQDDEALLQKKLIAEIRPGSVSSSVPCLPAYI
LFMCLRHADYSNDDQKVESLLTQSINSIKRVLKKNSADFEMTCFWLANTSRLLHCLKQYS
GEQAFMTQNSVKQNEHCLKNFDLTEYRQVLSDMSIQVYQQLIRVAEASIQPMIVSAMLES
ESIPSLAGVKPMGYRNRSSSMDLDGGGGFTLQALIRQLSLFSCVMSEHGLDPEIRGQVVR
QLFHCINAVTLNNLLLRKDVCSWSNGMQLRYNTSQLEEWLRANSLFQSKASVCLEPIIQA
AQLLQVKKKTTQDAEAICSLCSAMSTQQIVKILNLYTPLNEFEERVTVSFIRSIQNRPQQ
RPDAGQLLVDTKFSFPVLFPYSPSALSLETLLIPASLGLDFLSRV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagtataacccctactgcaagtacacccgggtctggatccctgacccctcg
gaggtgtggaaagctgcagagatcatcagagacttcaaggagggagaaccggagctgctg
ctgagactggaggatgacacgacgctggcctacccggtgggtccgaaggggaagcccctc
cccttcctgcgtaacccggacatcctggtgggggagaacgacctgacggtgctgagctac
cttcatgaacctgcagtgctgcacaacctgagggtccgcttcctagagcccaaccacatc
tacacctactgcggcatagtgctggtggccatcaacccgtatgaccagctccatatctac
ggagaggaagtgatccgggcctacagtggccagaacatgggggacatggacccccacatc
ttcgctgtggctgaggaggcctacaagcagatgggcagagatgagaggaatcagtccatc
atcgtgagtggagagtccggagcaggaaagacggtttctgcgaagtacgccatgcgcttc
ttcgccacggtgggcggctcggctaacgacacgaacgttgaggagaaggttctcgcctcc
agccccatcatggaggctataggaaatgccaaaaccactagaaacgacaacagcagtcgc
tttggaaagtacatccagatcggcttcagccggcacttccacatcatcggagccaacatg
aggacgtacctgctggagaagtcccgggtggtgtttcaggcggaggacgagaggaactat
cacatcttctaccagctttgtgcgtccagcagcctaccggagttcagggagctgggcctc
accagtgcagaagacttcaacttcacgtctctaggcgagaacatcttcatcgagggcgtg
aacgacgctgatgacttcaagaagaccagagaggccttaactatgctagggataaaggaa
agcagtcagagcagcatcttcaaagtggtggcatccatccttcacctcgggaacatcgag
atctgcgcagagcgagacggagagtcgtgtcacgtgtcgagggacgacctccacctgcag
cacttcagccggctgctgggcgtggagctgcagcagatggagcactggctctgtcacagg
aagctggtcacctcatcggagacgtacctgaagacgatgtccaagaagcaggcggagaac
gcccgcaatgcactcgccaaacacatctacgcccgcatgttcgactggatcgtggagcac
atcaacaaagtcctgcagagctcgtccaaacagcactcgttcatcggagtgctcgacatc
tacggctttgagacgttcgaggtcaacagttttgagcagttctgcatcaactacgccaac
gagaaacttcagcagcagttcaactctcatgtgttcaagctggagcaggaggagtacatg
aaggagctgattccctggaccctgatagacttctgcgataaccagccgtgcatcgacctg
atcgaggcccggctggggatcctggacctgctggacgaagagtgtaaagttcccaaaggc
acggaccagaactgggcccagaagctgtaccagaaacacttgagcagcgctcacttccag
aagccccgcatgtccaacacctccttcatcatcaaccactttgccgacaaggtggagtac
gagtgtgaagggttcctggagaagaaccgagacaccgtgtacgaggagcagatcaacatc
ctgaaggccagccagtttcagctggttgcagatctgtttaatgagaaagaggacgtcgtc
ccgaagtcgtccagagtgaacgtccgaccggcgaagccgacgcctcgacccgcgaacaaa
gagcaccgcaagaccgtgggccaccagttccgcagttctcttcgcatgctcatggagact
ctgaatgcgacgactcctcattacgttcgctgcatcaaaccgaacgattacaaggaggcg
ttctcgtttgactcaaagcgagcggtgcagcagctcagagcctgtggagtcctggagacg
atcaggatcagtgcagcggggtatccatccaggtggacgtacccggacttcttcagccgc
taccgggttctgctaaagaagtcagacatgacattagccgataagaagctggtgtgtaaa
aacctgctggagacgctcatcaaggagcccgacatgttccagttcgggaagacgaagatc
ttcttccgggccggccaggtagcgtacctggagaagctccgagccgacaggttccgctcc
gcctgcatccggatccagaagacggtgcgcggctggctgcagagagtccgcttcctgaag
atccgcaagaccgccgtcacgctgcagagatacgggaggggcttcatggcccgcaggcat
gctgacttcctgcggcagacccgcgctgcgctcatctgtcagaagcagctgcgcatggtg
agagacagacaggcttttctgagggtgagacgggcggccgccaccatccaggccttcacc
cgcggcatgttcactcgccgcatcttcaaggagttcctcctgcaccacaaggcgatgatc
atccagcggtgcgttcgaggctggctgcagcgcaggaagttccagcgctcgcgggcagcg
gccatcacgctgcagtgtgccttcaggtgcgtgcgggcgaagcggcgcgtgcagcagctg
aaggcggaggcgcgctcagcgcagcacctgaagaagctcaacagcggcatggagaacaag
atcgtgcagctgcagaggaagatggacgacaagtccaaggagcagcgcttccagaacgag
cagctgctgcaggtgaactcctctctgggcggagaggtgaagctgctgcagaagaagctg
caggaggtgagcagcctgcagcagggcgggggggggcagctggcctcgctgcatgacgag
ctgcagagactcagagaggagctgcaggaggcgcatgctctcagggggaagctgcaggag
gagcatgctaacgagaagcaggggctaacacagagggtggaggagctgcagaaggagaac
tctctgctgaaaagcgagaaggaggagatgaaccagaagatcttgaagctgacacggagc
tctgcagaggagggcagcagagcttcgctgcaggaggagttggatgaggagcggctgaga
taccagaaccttctgaaggaggtctccagactggagcagaaatacgagaacctgaaggag
gagcagtccttcagcaagtttgcccccgggcaccgcagagacgcctcgactctgagcagc
caggagtcggactccaactacacctccatctccacgtcagagctgggagacaccgaggac
accctgcagcacgtggaggatgtgggtgtggaggcagcagctctggacctctcggtgttc
ctgaagctgcagcgccgggtcagagacctggagacagagagagggaggctgcagcagcag
ctggagcgggggggcgagcacaggagctctgaggccccgcctctctctgagcaggacgct
gcggacctcacatacaccagcctcaagctgcaggacgtcgaggtggagaacctgaagctc
aggaaggatctcctctcgctccagaaggcggtctctgagagggcggggcttagcgatccc
accaatgagctgcaggagagccacgccctgcttatgtctcagctgcgctcagccaatgag
gagctggaggctcgaaaggaggaggtgcttattctgaggacacagatcataagctccgcc
cacaaggagcagagccccgcccaccagaaggagcagagccccgcccaccaaattgagcag
agccccgcccaccagaaggagcagagccccgcccacctgaaggagcagagccccgcccac
cagaaggagcagagccccgcccacctgaaggagcagagctcggacggtgctatagtcagt
gagcagggcactctgccagaaaaacaggaatctgtgtgtgccggagagtgtgagtccaag
aggctgctggaggtgcagctgcaggcacagacgcgtcgtcacggcgacgagctgacggcg
ctgcacacgcagatcgagctgctgaaggccgacatcgagaagaagcaggagctgctgaac
ttcacctcctcgctgtcccctgaagacagagtggagtacagcgtccagcaggagatcaca
cggctcaccaacgacaacctggacctaaaggagctgctggagaaactggaaaagaacgag
aggaaactgaagaagcagctcaggatttacatgaagaaagtccaggagctggaggtgtct
cagactgagaggacacgtccccccctcagccgtcaggtgacggtccagaggaaggagaag
gactttgaggggatgctggagctccatcaggacgacgaggcgttgctgcagaagaagctc
atcgcagagatcagacccggcagtgtgtcctcgtctgtcccctgtctcccagcctacatc
ctgttcatgtgtctccgtcacgctgattatagtaatgatgatcagaaggtggagtctctg
ctgacccagtccatcaactccatcaagagggtcctcaagaagaactctgctgactttgag
atgacgtgtttctggctggcgaacaccagccgtctgctgcactgcctcaagcagtacagt
ggagaacaggccttcatgacccagaacagtgtgaaacagaacgagcactgcctgaagaac
ttcgacctgaccgagtaccggcaagttctgagtgacatgagcatccaggtctaccagcag
ctgatccgcgtggccgaggcctccatccagcccatgatagtgtcggccatgctggagagc
gagagcatccccagcctggcgggggtgaagccgatgggctacaggaaccgctcgtccagc
atggacctggacgggggggggggcttcaccctacaggctctcatccggcagctcagcctc
ttcagctgcgttatgagtgaacacggcctggacccagagatcagaggtcaggtggtccga
cagctgttccactgcatcaacgctgtgaccctcaacaacctgctgctgaggaaggacgtg
tgcagctggagcaacggcatgcagctcaggtataacacctcccagctggaggagtggctc
cgtgctaactctctgttccagagcaaggcgtccgtgtgcctggagccgatcatccaggcg
gctcagctgctgcaggtgaagaagaaaaccacgcaggacgcagaggccatctgttcgctg
tgcagcgcgatgagcacgcagcagatagtgaagatcctgaacctgtacactcctctgaac
gagttcgaggagagagtcaccgtgtccttcatcaggagcatccagaaccggccccagcag
cgccccgacgctggtcagctgttggtcgataccaagttctcgttcccggttctgttcccg
tattccccgtcagcactgagcctggagacgctgctcatcccggcctcgctcggactcgac
ttcctcagcagagtctga
DBGET
integrated database retrieval system
