Trematomus bernacchii (emerald rockcod): 117470228
Help
Entry
117470228 CDS
T09643
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
tben04510
Focal adhesion
tben04540
Gap junction
tben04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117470228 (pdgfd)
04020 Calcium signaling pathway
117470228 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117470228 (pdgfd)
04540 Gap junction
117470228 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117470228 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tben04052
]
117470228 (pdgfd)
Cytokines and neuropeptides [BR:
tben04052
]
Cytokines
Growth factors (RTK binding)
117470228 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
TPK_catalytic
Motif
Other DBs
NCBI-GeneID:
117470228
NCBI-ProteinID:
XP_033970815
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MNGPVVFQMWTVLLLWTITGVCRAQVATAKVLRGNIRRDDSNRLTTDFYRKEENISVTPV
RGAIYSPRYPNAYPRNVLLSWKLLSPPGSRIHLEFDGHFGLEEAENGVCRYDFVEVEDQS
ETSTIIWGRWCGQKAPPSLNSKTNMLRVTFKSDDYFVAKPGFKVFYSLLYESPRPASNTN
WEAVTMPMSDAVGGQMPVAVTEVPFSLEDLDRTIAAFETVEQLFRSLSPDTWRQDLDSIY
TQTHIHYRSRAYHLASRQNKVDLNRLYDDVKRYSCTPRNYSVNLREELRATNAVFFPRCL
LLKRCGGNCGCGTENWNTGCTCQASKTTLKLHEVLKYAPEVSLHQRHRRPVKVRWVIDEI
FLTHHEKCECACPSQPPR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaccagtggttttccagatgtggacggttttactgttgtggactatcaccggg
gtctgcagggctcaggtcgccaccgccaaagtgctgagaggaaacatcaggagagacgac
agcaatcgcctcaccacagacttttaccgcaaagaggaaaacatctcagtaacgccggtg
agaggagccatctacagcccacgctaccccaacgcttacccccgcaatgtactgttgtca
tggaaactgctgtccccacctgggagccgcatacacctggagttcgacggacacttcgga
ctggaggaggctgagaatggggtctgcaggtatgactttgttgaagtggaggaccaatca
gagaccagcactatcatttggggtcgctggtgtgggcagaaggcaccgcctagtctcaac
tccaaaaccaacatgctcagagtcaccttcaagtctgacgattactttgttgcaaagccg
ggattcaaagtgttctactccctgctgtatgaatctccccggcctgcgtccaacaccaac
tgggaggccgtcaccatgcccatgtcggacgctgttggagggcagatgccagtggcagtc
accgaggttccattctcattggaggatttggaccggaccattgctgcctttgaaactgta
gagcagctgttcaggtcgctcagcccagacacctggagacaggacctggacagcatctac
actcaaacacacatacattatagatccagggcctatcatctggcaagcagacagaataaa
gttgatctgaaccgcctttatgacgacgtcaagcgctacagctgtacgcctcggaattac
tctgtgaacctgagagaggagctgagggccaccaacgccgtcttcttcccccgatgtctg
ctgctcaaacgctgtggaggcaactgtggctgcggaacggagaactggaacaccggctgt
acctgtcaggcctccaagacgactctcaaactacacgaggtgctgaagtacgccccagag
gtcagtctgcatcagcgccatcggaggccggtgaaggtgcgctgggtgatcgatgagatc
ttcctcacacaccatgaaaagtgtgagtgtgcgtgtccctcccagcccccccgctga
DBGET
integrated database retrieval system
