Trematomus bernacchii (emerald rockcod): 117470278 Help Entry 117470278         CDS       T09643                                  Name (RefSeq) roundabout homolog 1-like   KO K06753   roundabout, axon guidance receptor 1 Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:tben04515]     117470278 Cell adhesion molecules [BR:tben04515]  Immunoglobulin superfamily   ROBO family    117470278 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Ig_5 PKD Ig_J_second Motif Other DBs NCBI-GeneID:  117470278 NCBI-ProteinID:  XP_033970883 LinkDB All DBs Position Unknown AA seq 1548 aa AA seqDB search MMPACLTGIYCLLAFLHICSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTP TVEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIIHGRRSKPDDGSYVCVARNYLGQAI SHNASLEVAILRDDFRQNPVDVMVAVGEPAVLECQPPRGHPEPTISWRRDGSNLDDRDER ITIRSGKLMITNTRKSDAGKYICVGTNMVGERESEIAELTVLERPTFVKRPSSVVALAEE SVEFHCVVQGDPVPTVRWRKDDSDLPKGRSEIQEDHTLIVRQVTYSDVGSYTCVVENMVG KSESSATLTVHVNTVPPAFAIHPRNQVVGVGRTVTFHCEATGNPQPAIFWQREGSESLLF SNHPPQPYSRLSVSQMGSLTITDVQRSDGGFYSCQALNIAGSVIIKALLEVTDSGSDHPP PVIRQGPVNQTIAVDSTVLLGCQTADSPPPTVHWKKDGLVMSPSDSRMSITDSGSLEIRY SKLGDTGFYTCVASSPNGEASWTAYLQVEEFGVVVQSSEPFDPSLIPSAPSKPEVTDISR TSVTLSWKSDTNNGAKPTSYLIEAFSYTSGSRWVTLAEHINTQTFVLRNLKPATVYLFMV RAVNAYGLSDPSPISDSIRTQDSTSTMQGVDHRHIQRELGDVVIHLHTPTVLSSSAVRVQ WSVEQQSPYIQGYKVLYRASAEHGQPEGQWSVLEVHAPREEGVVLGQLKRGSIYEFKVRP FFDEFQGADSEVKVVRTLEEAPRRAPQGVTVTKSDANGSAILVAWKPPRERDDAGIIQEY KIWCLGNESRYHVNQSVDGSTFSVLISTLTPGIRYSVEVAASNGAGAGVKSDVTFFQLDS AGQMMDSEERDTLSQISDVVRQPAFIAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYTG IRKVPSFTFTPTVAYQRGESACGAGRPGLLSMGEPLNQLWLPDNWPNACANHKDCSINCC NNGNGTSDSNMTTYSRPADCIANYGSHPENKQLGPETAIYSDVNLSNKLNEIKTFNNSSL CYASPGGDPAATYEPIPYATTQLIQASIKSKAAAGGALAEPMDMHCWKQPPNPPPIPKEM MAQMQYNIIEQNLLNKDHLQGSEGMIHPKTIPYNQSRDHSTGGSHQSSDRGSNSTAGSQN QKKGTRAPKIQKHNAVSWGEAPPPPHANAWDCDEYSLPMERSFDPDGRIEGCPTPPVRGA ASSPPVVSYSHPPNTQGDLSNGLHNGAQHLSQHLSSHARPLSPSHTYSSIPFCMDTDGQE EEESEEEADEETDAEPAESHYSQHHNQQKHKHQLHPPSPHKLLLHGLEQTPASSTGDLDR SVTGSMVNSWGSASEDNISSGRSSVVSTSEGSFFTDGDFNQAALSLRENVGLRMGRYPEE SGRRPQRPSSPMSTDSNMSPAITHKRPRRHKQNQSGHQDYQPKDVFNDDSCTPLSFSSQM SHGDYIARGATLPRVGSGDARGRRGSTGTHRVREAAEGQEKHKTPPGGKGSSKSRQHSEL GDVLLYSRPAFPSGHAQREPDDTHPSSFMSCGDSRTKQGGQVEEFLKS NT seq 4647 nt NT seq  +upstreamnt  +downstreamnt atgatgcctgcgtgtctgacggggatttactgtctactggcatttctacacatttgttca gggtctcgtcttcgccaggaagacttccctccccgcattgtggagcacccatctgacctc attgtgtccaaaggggaaccagccactctcaactgtaaagccgagggccgcccgaccccc acggtggaatggtacaaagacggcgagcgcgttgagacggaccgcgacaacccccgctcc caccgtatgctgctgcccagcggctccctcttcttcctgcgtatcatccacgggcgacgg agcaagcccgacgacggcagctacgtgtgcgtggcccgaaactatctgggccaggccatc agtcacaacgcgtccctggaagtagccattttgcgcgatgacttcagacagaacccggtg gacgtcatggtggcagtgggtgagccggccgtgctggagtgccaacccccccgagggcac cctgaacccaccatctcctggaggagagatggttccaacttagatgacagagatgaacgc atcacaatccgaagtggcaagctgatgatcaccaacaccaggaagagtgatgcggggaag tacatctgcgttggaaccaacatggtgggagagagggagagtgagatcgctgaactcact gtgctagagcgcccaacctttgtgaaacggcccagcagtgtggtggcgttggcggaggag agcgtggagttccactgtgtggtacaaggagaccctgttcccactgtccgctggaggaaa gacgactctgacctgcctaagggccgatctgaaatccaagaggaccataccttgattgtt cgccaagtgacctattctgacgtgggctcgtacacatgtgtggtggagaacatggttgga aagtctgaatcatccgccacgctcactgtccacgtcaacaccgtgcccccagcgtttgcc atccaccccaggaaccaggtggtgggggtgggcaggacggtcaccttccactgcgaggcc actggcaacccacagcccgctatcttctggcagagggagggcagtgagagtctgctcttc tccaaccatccgccgcagccctatagccgtctgtctgtgtcccagatgggcagtttgacc atcaccgatgttcagcgctctgatggaggcttctacagctgccaggctctcaacatcgcc gggagtgtcataatcaaagcactgctggaggtcacagactctgggtcagaccaccctcct ccagtgattagacagggcccagtcaatcagaccattgcggtggacagcacagtgctcctg ggctgccagacagctgactctccacccccgacagtccactggaagaaggatggtttggtg atgtcgccttcagactcccgcatgtccattaccgactcaggatctctggagattcgttac tctaagcttggagatacaggcttctacacttgtgtagcttctagtcccaacggagaggcc tcctggacagcgtacctacaggtggaggagtttggagttgttgttcagtccagtgagccg tttgaccccagcctaattcccagtgctccatccaaacctgaggtgactgacatcagccgc acttctgtgactctgtcgtggaaatcggacaccaataatggcgcgaaacctacatcttac ctcatcgaggcattcagttatacgtcgggcagcagatgggtgaccctagctgagcatata aatacccagacctttgtgctgaggaacctgaagcctgcgactgtctacctcttcatggtc agagcggtgaatgcttacggcctcagcgaccccagcccaatctccgactccatcagaaca caggacagcacatccaccatgcagggagtggatcaccgtcacatccagagggagctgggt gacgtggtaatccacctgcacacaccaaccgtcctctcctcttctgctgtcagggtgcag tggtcggtcgagcagcagtccccgtacatccagggctacaaggtgctgtacagggcgtcc gctgagcacgggcagccggaggggcagtggagcgttctggaggtccacgccccccgggag gagggggtggtgctcggtcagctgaagagagggtccatctacgagttcaaagtgcggccc ttcttcgatgagttccagggagccgacagtgaggtgaaagtggtccggacgctggaagaa gccccgagaagagcaccccagggtgttacagtgacaaagagtgatgccaatgggagcgcc atcctcgttgcttggaaaccacctcgagagcgagatgatgctggaatcattcaggaatac aagatctggtgtctgggtaatgagagtcgctatcatgtgaaccagtctgtggacggctcc accttctccgtgctgatctccactctcacgccgggaatccgctacagcgtagaagtagca gcaagcaacggtgctggagctggggtcaagagtgatgtcaccttttttcaattagactct gcaggccagatgatggacagcgaggagagggacacgttgtctcagatctcagacgtggtg aggcagccggcctttatcgcaggcattggcgccacctgctggctggtgctgatgatcttc agtgtgtggctctaccggcaccgcaagaagagaagtggcctcagcagcacatacaccggc atccgcaaggtgccatcatttacctttacacctacagtggcatatcaaagaggagaatca gcgtgcggtgcgggcagacctggccttctcagcatgggggaacctctcaaccagctgtgg ctgcctgacaattggccaaatgcatgtgccaatcacaaggactgtagcatcaactgctgc aataatggcaacggcaccagtgacagcaacatgacaacatacagccgcccagctgactgc atagctaactatggaagccatcctgaaaacaaacagctgggtcctgagacggccatttac agcgacgtgaacctctccaacaagctcaacgaaatcaagacgttcaacaactccagcctg tgctacgccagcccgggaggagacccagcggccacgtacgagcccatcccctacgccacc acgcagctcatccaggccagcatcaagagtaaagcagctgccgggggggctttagctgaa cctatggacatgcactgctggaaacagccccccaaccctcctccaataccaaaggagatg atggcacagatgcagtacaacattatagagcaaaacctgcttaataaagatcatctgcaa ggaagtgaaggaatgatccatcctaagactatcccctacaaccagagccgtgatcacagc acaggcggctcgcaccaaagctccgacagaggcagcaacagcaccgcggggagtcagaat caaaagaaaggaacgcgggccccaaaaatccagaaacataatgcagtgagctggggagaa gccccgcctcctccacatgctaatgcctgggactgcgacgagtacagcctacccatggag aggagttttgatccagacgggagaattgaaggctgccctactccaccagttagaggggcg gcctcgtctccccccgtcgtgtcttacagtcacccccccaacacacagggagacctgagc aacggcctgcacaatggagcccagcaccttagccaacacctcagcagccacgctcggcct ctgtccccgtcacacacctacagctccatccccttctgcatggacaccgatgggcaggag gaggaagaaagtgaagaggaggcagatgaggagacagacgcagagcccgctgaaagtcac tacagccaacaccacaaccagcagaagcacaaacaccagctgcaccccccctctccacac aagctgctcctccacgggctggagcagacccccgcctccagcaccggggatctggacagg tcggtcacagggtccatggtaaacagctggggctcagcatccgaagacaacatctcatct ggcaggtccagtgttgtcagcacctcggaggggtccttcttcacagacggagatttcaac caggcggcgttgtctttgcgggaaaacgtcggcctgcgcatgggccgatatccagaggag tcaggccggcgcccccagcggcccagcagccccatgtccacagacagcaacatgagtcct gcaataacacataaaagacccagaagacataaacagaaccagtctggtcaccaggactac caacccaaagatgtcttcaatgatgactcctgcacgcctctgagtttttccagccagatg tcccacggcgactatatagcgaggggcgccacgctgccccgggtgggctctggggatgcc cgggggcggaggggcagcactgggactcacagggtcagggaggctgcagagggccaggag aagcacaagactccacccggaggaaaaggaagcagcaagagccgacagcactcagaatta ggggatgtcctactgtacagtcgtcctgctttcccctcaggtcatgctcagagggagcct gatgatactcatccatccagctttatgtcatgtggagactcaaggaccaaacagggagga caggtggaggagttcctcaaaagctaa

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