Trematomus bernacchii (emerald rockcod): 117470306
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Entry
117470306 CDS
T09643
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben05100
Bacterial invasion of epithelial cells
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117470306
05100 Bacterial invasion of epithelial cells
117470306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117470306
Membrane trafficking [BR:
tben04131
]
Endocytosis
Macropinocytosis
Others
117470306
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117470306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
SOS1_NGEF_PH
RHG20_PH
PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
117470306
NCBI-ProteinID:
XP_033970922
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MDIGNDVDLSNKNITPLWKRRTDNCKKKHDLRGPKPRPLSYHINGVMTTDFPLEDNGSLT
LSQPEERLTPPTWGKNTAVLKHILHKPLKKSRVVRSISIGHFSTGLFSLSRFRSEESRSA
SLDNRVRNVDCGGENNSNGVTVWQEKGLQETQKRRSSPFSVFSQKDQIAFGTSPASPEEL
PINSSPVLSSRTPNNNNSPSPPARHTPTPSYSSTSSIPSLSSLTSSDPPTPRSASPADRG
QALLRQSSFSLASSHASCSSSMSSTSPSPSLSPSISPSIVLSTHSAAALKMGTQQLIPKG
LASGIRSKLPPSEPQVQGLVVLPGLDHTKRSLKALSMVETGSFFSTAAGHGEGADGESAN
PGTLNRGLRSTSYRKACVSVEDSEVPSMDPKAHRFSQPVIKWLDEDKIASPVSLASPGTV
SLTSPGTAKPTSPGTPKLASPRILKPASLGKEKPTNTGKNKSLDRKKVLTHQRTFDSEEE
EMYQNYKEKALHNDSDEDADSREPKPDNGIVVQYRPIRTSWSQLSVVKKSGLSDKLSQEE
RKRQEAIFELISSEHSYLHSLEILIRMFKNSAELREAMTKTEHHHLFSNITDVCEASKKF
FKELEERHQQNIVINDISDIVDKHSQSNFDPFVTYCSNEVYQQRTLQRLVSKNPVFKEVL
TRIESHPDCRNLPMISFLILPMQRITRLPLLMDTICQKTPKDSAQYEDCKKALQAVSKVV
RKCNEGARTMERTEMMYTINSQLEFKIKPFPLVSSSRWMVKRGELTAFVEDNGIFLKRTS
RQQVYFFLFNDVLIVTRKKSEESYTVIDYALRDQIWVGSCQPEDLNLSPVRSTASMLSSR
QAGANHLFRLRFRSNHSSEKVPMILGTDLLNERARWISALGQNVNNNKSQDKTYVMQVEV
TRTYTAKQPDELSLQVTDVVLVSQTVEDGWYEGERLRDGERGWFLAECAEPITCQASIER
NMQRMDRLQGLETNV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggcaatgatgtggatttgtccaataaaaacatcaccccattgtggaaacgc
cgcacagacaactgtaaaaaaaaacacgacttaagaggacccaaaccgcgaccgctcagt
taccacataaatggggttatgacaacagacttccctttggaggacaatggttcccttacc
ttgagccaacctgaggagagactcacacctccgacatggggcaagaacactgctgtgttg
aagcacattctgcacaaacccttaaaaaaatccagagttgtccgaagcattagcatcggg
cacttctcgaccggactcttttcactgtcaagatttagatctgaggaaagcagatccgcc
tcactggacaatagagttcgtaatgtagactgtggcggggaaaataatagtaatggagta
acagtatggcaggaaaagggacttcaggaaacccagaaacgcaggtccagcccgttcagt
gtgttctcacagaaagatcagatagcatttgggacaagtccagcctcacctgaagagctt
cctatcaactcttctcctgtcctgtcttcacgcactcctaacaacaacaacagcccctct
cctcctgcccggcacactcccaccccttcctacagctccacttccagcatcccctccctt
tcttctctaacctcctcagacccaccgaccccacgctccgcatcgccagcagacagagga
caagcgctccttagacagtcctcattctcgcttgcctcctcccatgcctcttgctcttct
tccatgtcctccacctcaccctctccctcactttccccatccatctctccctccatcgtc
ctcagcacccacagtgcggctgccctgaagatgggcacccagcagctaattcccaagggt
ttagcatccggtattcggagcaagttgcctccctctgagcctcaagtccaaggtttggtg
gtgctgcctgggttggatcacaccaagcgatcattgaaagctctcagtatggtagaaaca
ggatccttcttttctacagcagcgggccacggtgaaggtgctgacggagaaagtgcgaat
ccagggacactaaatagaggcctgaggagtacgtcctataggaaagcttgtgtgagtgta
gaggactcagaggtcccatcgatggatccaaaagcccatcggttttcccagcccgtcatc
aaatggctggatgaggataagatagcttcacccgtcagcctagctagtcctggcaccgtc
agcctcactagccctggaactgccaagcctacgagtcctgggacccccaaactggccagc
cccaggattttaaagcctgctagccttggaaaagaaaagcctacaaacactggaaaaaac
aaaagtctagataggaagaaagtattgacccatcagcggacgtttgacagtgaggaggaa
gagatgtaccagaactacaaggagaaggccttacacaatgattcagatgaggatgcagat
tctagagaaccaaaaccagataacggcattgtggtgcaatacagacctatacgcacctcc
tggagccagctgagtgtggtcaaaaaaagtggtctttctgacaagttgagtcaagaggaa
cgcaaaagacaagaagccatctttgagttgatctcctcggagcactcttacctccacagt
ttggagatcctgatccgcatgttcaagaactccgcagagctcagagaggccatgaccaag
accgaacaccaccacctcttctccaacatcaccgacgtctgtgaggccagcaaaaagttt
tttaaggaattggaggaaagacaccaacagaacattgtgatcaatgacatcagcgacatc
gttgacaagcactcacaatccaactttgatccttttgtgacatactgctccaatgaagtc
taccagcagcgaaccctgcagaggctggtgtccaagaatccagtttttaaggaggtgctc
accaggatagagagccacccagactgcaggaacctccccatgatctccttccttatcctg
cctatgcagaggataacacgtctgcccctactcatggatacaatctgtcagaagacacct
aaagactcggcccaatatgaagactgtaagaaagctttacaagctgtcagcaaggtggta
agaaagtgtaatgaaggagcgcgcactatggagaggacagagatgatgtacaccattaac
tctcagctggagttcaagatcaagccttttcccctggtctcatcctccaggtggatggta
aagagaggagagctgactgcatttgttgaggataatggtatcttcctgaagcgaacgtca
cggcaacaggtctatttcttcctcttcaatgatgtcctgatcgtcactaggaaaaagagc
gaggagagctacactgtgatcgactacgctctgagggaccagatctgggtgggatcctgc
cagccggaggatctcaacctgtcaccggtcagaagcaccgccagcatgctgagctcacgg
caagctggcgccaaccaccttttccgtctgcgtttccgtagcaaccactccagtgaaaaa
gtgcccatgatccttgggacggatttgctgaatgagcgtgcccgatggatcagcgcactg
ggccaaaacgtcaacaacaacaagagtcaggacaaaacctatgtcatgcaggtggaggtg
accagaacgtacacagccaagcagccagatgagttgtccctgcaggtgactgatgtggtg
ctggtctcgcagactgtagaagatggctggtatgagggtgagcgactgcgcgatggagaa
agggggtggttcctcgccgagtgtgccgaaccaatcacatgccaggccagcattgagcgc
aacatgcagaggatggatcgcctgcaggggttggaaactaacgtgtga
DBGET
integrated database retrieval system
