Trematomus bernacchii (emerald rockcod): 117470344
Help
Entry
117470344 CDS
T09643
Symbol
cul3b
Name
(RefSeq) cullin-3b isoform X1
KO
K03869
cullin 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04120
Ubiquitin mediated proteolysis
tben04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117470344 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117470344 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117470344 (cul3b)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117470344 (cul3b)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
117470344 (cul3b)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117470344 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
RhgB_N
DUF6655
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
117470344
NCBI-ProteinID:
XP_033970978
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNALNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTDDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLVESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLLTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLG
KHSGRQLTLQHHMGSADLNATFYGAIKKEDGAEVGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNRDKSVFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV
LVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcagcaaaggcggcaccaagaaggacaccaaaatgaggatacgggccttt
cctatgacgatggatgagaagtacgtcaacaatatctgggaccttctgaagaatgccatc
caggagattcagaggaaaaataacagcggcctgagctttgaggaactgtacaggaacgcc
tacacaatggtgctacacaagcacggagagaagctgtacactggtctgcgagaggtcgtc
accgaacaccttatcaacaaagtacgagaagatgtcctcaacgccctaaacaataacttc
cttcaaaccttaaatcaggcctggaatgaccatcaaacagcgatggtgatgatcagagac
atcctgatgtatatggatcgggtgtacgtacagcagaacaatgtagagaacgtctacaac
ctgggtcttatcatctttagggatcaggtggtccggtatggctgcatcagagaccacctc
cgacagacgctgctggacatgatcgcacgtgagaggaaaggggaggtggtggacaggggg
gccattagaaacgcctgccaaatgttaatgatcctcggcctcgaggggagatctgtttat
gaagaagactttgaggcaccgtttttagaaatgtctgcagaattcttccagatggagagc
caaaagttcctggcagaaaacagtgccagtgtgtacattaagaaggtggaagccagaatc
aatgaggagattgagcgggtgatgcactgcctggataaatccacggaagagcccattgtc
aaggtggtggagcgggagctcatctccaaacacatgaagacaatcgtagagatggagaac
tctggcctggtgcacatgctcaaaaacggcaagaccgacgatttggcgtgcatgtacaag
ctgttcagccgggtccccaatgggctgaagaccatgtgtgagtgtatgagctcgtacctg
cgggagcaaggaaaggctctcgtgtcagaggagggagagggaaagaaccccgtagactac
atccagggtttgctggacctgaagtcacgcttcgaccgcttcctcgtggagtccttcaat
aatgaccggctcttcaaacaaaccatcgcaggcgactttgagtacttccttaacctgaac
tctcgctcgcctgagtacctctcactcttcattgatgacaaactgaagaaaggagtaaaa
gggctgacagagcaggaggtagagtccatactggacaaggccatggtgctgttccgcttc
atgcaggagaaggacgtgtttgagaggtactacaagcagcacctcgcccgcaggctgctc
accaacaagagcgtctctgacgactcggagaagaacatgatctcaaagctcaagaccgag
tgcggctgtcagttcacttctaagctggagggaatgttccgggatatgagcatctccaac
accaccatggatgagttcagacaacatctactgacaaccggggtgtcactcggaggggtc
gacctcactgtaagagtcctgaccacgggatactggccaacacaatcagcaacacccaag
tgcaacatccccccttcaccgagacatgcatttgaagtcttcagaaggttttatcttggt
aagcacagcggcagacaactcacactccagcaccacatgggctctgcagatctaaacgcc
accttctacggtgccatcaagaaggaggatggcgcagaggttggagtgggcggagcccaa
gttacaggctccaacaccaggaagcacatcctgcaggtctccaccttccagatgacaatc
ctcatgctcttcaacaacagagacaagtctgtgtttgaggagatccagcaggagacggac
atcccagagagggagcttgtgcgagcgctgcagtctctagcctgcgggaagcccactcag
agagtgctcaccaaggagcccaagtccaaggagatcgagaacggccacgtgtttacagtc
aacgaccagttcacatccaaacttcaccgtgtcaagatccagacagtggctgctaagcaa
ggggagtcagacccggagaggaaggagacgcggcagaaagtggacgatgacaggaagcat
gagatcgaagctgctattgttcgcatcatgaagtccagaaagaagatgcagcacaacgtt
ctagtagcagaggtcacgcagcagttgcgagcgcggttcctccctagccctgtagtcatc
aagaagcgcattgaaggactcattgagagggaatatttggcacgaacaccagaggaccgc
aaagtgtacacttacgtagcataa
DBGET
integrated database retrieval system
