Trematomus bernacchii (emerald rockcod): 117470350
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Entry
117470350 CDS
T09643
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117470350 (rabgef1l)
04137 Mitophagy - animal
117470350 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117470350 (rabgef1l)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117470350 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
117470350 (rabgef1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
117470350
NCBI-ProteinID:
XP_033970987
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MMSQRRGIHLDQSELLCTKGCGFYGNTGWQGLCSKCWREENQREKQKQIQEDCALAERLQ
KEEEEAYTSRNQKAQSQPTITPFGKFVERKTKEKSSKVNTVTKFFTPSSKTPPKKDSPFD
AHSSPSPSSSTSRHSSVDSDHATREFIDFLKPLKSGREIFKQCRAFTESMVYKRDMAADE
LSECVQDFYQNLSDRLHTQFKGSSDHVESVMDEVEKYMMTRLYKEVFCPETTDDEKKDLA
IQKRIRALHWVTIEMLCVPVEEEIAEVSDSVVKAITDVIEMDSKRVPKEKLSCITRCSKH
IFNAIKISKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFSNPGRLMTGEDGYYFT
NLCCAVAFIEKLDGQSLNLSSEEFDHYMSGQASPPWPQPGGASSSSPGSAALSQVPKGLD
LLTGLGERQERVLEEARQLESDLIDWTDEVEQKVQSVLESFPPETETPAPPTASGTAVSA
TAVSVASAIDSDNVENEHLPPPLTPQVFAG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccagcggcgtgggatccatctggaccaatcggagctgctttgcactaaagga
tgtggtttttatggcaacactggctggcagggcctgtgctcaaagtgctggcgagaggag
aatcaacgagaaaagcaaaaacagattcaagaagactgcgcacttgctgaaaggctgcaa
aaagaggaagaggaagcatacacaagcagaaatcaaaaggcccaatcacagcctaccatc
acaccctttggcaagttcgtggaaagaaaaactaaggaaaagtccagcaaagtcaacaca
gttacaaagttttttactccctcctcaaaaacaccaccaaaaaaagattctccttttgat
gctcactccagcccaagccccagctcctccacaagccggcactcctctgtggacagtgac
catgcgacgagagagttcattgatttcctcaagcctctgaagtctggcagggagatcttc
aaacagtgccgggccttcactgagagcatggtctataagcgggacatggcagctgatgag
ctgtcagagtgtgtgcaggatttctaccagaatctctcagaccgcctccacacccaattc
aaaggttcatcagatcatgtagagagtgttatggatgaagtagagaagtacatgatgact
cgtctttacaaagaagtgttctgtcctgagactacagatgatgagaagaaagaccttgcc
attcagaagagaatcagagccttgcattgggtcaccattgagatgctgtgtgttcctgta
gaagaggaaatcgctgaggtgtcagacagtgtagtcaaagccatcacagatgtgattgaa
atggattcaaagcgcgtgcccaaggagaagctgtcgtgcatcactcgctgcagcaagcac
atcttcaacgccatcaaaatcagcaagaaagaggctgcgtctgcggatgacttcctcccc
acgctcatctacattgtgctgaaagcaaaccctccaagactgcagtccaacatccagtac
atcacccgcttcagcaaccccggcagactgatgacaggagaggatggttactacttcact
aacctgtgctgtgcggtggccttcatcgagaagctggacggccagtctctgaacctgagc
tctgaggagtttgaccactacatgtcgggccaggcctcccccccctggccacagccgggc
ggagcgtcctccagctccccgggcagcgccgctctcagtcaggtccccaaggggctggac
ctgctcactgggctgggggagaggcaggagagggtcctggaggaggctcgccagctggag
agcgacctcatcgactggacggatgaagtggagcagaaggtgcagagcgttctggagagc
tttcccccagagacagaaacccctgctcctcccacagcgagtgggacggctgtttcagcg
acggctgtttcagtggcgtcagccatcgactctgataacgtggagaatgagcacctgccc
cccccgctgacaccgcaagtgtttgctggttga
DBGET
integrated database retrieval system
