Trematomus bernacchii (emerald rockcod): 117470392
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Entry
117470392 CDS
T09643
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tben03110
]
117470392 (clpb)
Chaperones and folding catalysts [BR:
tben03110
]
Heat shock proteins
HSP100
117470392 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
ClpB_D2-small
AAA
AAA_5
Ank_5
Ank_4
Zeta_toxin
Sigma54_activat
AAA_22
AAA_16
Torsin
AAA_24
YchF-GTPase_C
AAA_3
bpMoxR
nSTAND3
NACHT
ATPase_2
RuvB_N
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
117470392
NCBI-ProteinID:
XP_033971045
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MLSSIPTRLIARRSRSLSPCSRVLQTSASGAVRQGTREKPAENNRNPILSTSRVSRRGIL
AEDTAGTSVNLAVQYHHLAPRWLSNLENRRNSWASLAGRGRNNNHYWEESGGGEGRGTGG
GAGRAGVASGGVLSAAALAFCLKKDSDNKGDALLEAARTNNSEDVARLVKEGVDTNQRHR
LGWTALMVAAMNRQHSVVKVLLAAGADPNAGDDFNNVYDTSREKGIHSLEVLVSREDEFS
SRLSSRAGFRGCTALHYATLTDDPRTVRMLLESGANPLQTNGLGHTARAYAKDGEVSTVL
TEFEGKFQEVQARREAAERRRFPLERRLKEYIIGQEGAINTVASAIRRKENGWYDEEHPL
VFLFLGSSGIGKTELAKQVARYMHKDLKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEE
GGQLTKLLKACPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTS
NIASDEIAQHALQLRQEAEEASRRKLADKLEDVQKGDDVKISRQFKESVIRPILKAHYRR
DEFLGRINEIVYFLPFCHSELLQLVTKELNFWAKKAKQRHDITLQWERPVLDLLAGGYNM
HYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRITVQSEDQEDPSTPSLRLEVVGEDS
TSRTLDIRPPLSPEH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgttatcatcgattcccaccaggctcattgctcgaaggtcgcgcagcctgtcaccgtgc
agccgcgtcctccagaccagcgcgagcggtgctgtgcggcagggcacccgggagaaaccg
gcagagaacaaccgcaaccccatcttgtccacctcccgggtctccaggagggggatttta
gccgaggacaccgctggtaccagtgtgaacctggcggtgcagtaccaccatctcgcccca
agatggctgtccaacctggagaaccgccgcaactcatgggcgtctctggccggcaggggg
cgcaacaacaaccactactgggaggagagcggcggaggagagggccgggggacaggaggg
ggagccggccgagcaggggtggcctctggcggggtgctgtccgctgctgccttggccttc
tgcctgaagaaagactctgataacaaaggtgatgctcttctggaggcagcgaggaccaat
aactctgaagatgtggccaggctggtgaaagagggggtcgatacaaaccaacgccaccgt
ctcggttggaccgctctcatggtggctgccatgaaccgccagcacagtgtggtgaaggtt
ctgctcgcagccggtgccgacccaaacgcaggagatgatttcaacaacgtttacgacacc
tcgagggagaaaggcatccactcactggaagtgctggtgtccagagaggatgagttcagc
agcaggctcagcagcagggcgggtttccgtggctgcacagcgcttcactacgccacgctg
acagatgacccccgcaccgtccgcatgctgctggagtctggtgccaaccccctgcagacc
aatggtttgggacacacagcgcgggcctatgccaaggatggagaagtgagcacagtactg
acggagtttgaggggaagttccaggaggtgcaggctcggcgggaggcggcggagaggcgg
aggttccccctggagaggaggctgaaggagtacatcatcggacaggagggggccatcaat
actgtggcctcagccatcaggaggaaggagaatggttggtacgacgaagagcatcctctc
gtattcctcttcctcggctcatcaggaatcggaaagacagagttggccaaacaggtggct
cgctacatgcacaaggacctcaaaaaggggttcatccgtatggacatgtccgagttccag
gaaaaacacgaggtggcgaagttcattggctccccgccggggtacgtgggacacgaggaa
ggcggtcagctgaccaagctgttgaaggcgtgtcccaacgctgtggtcctgttcgatgaa
gtagacaaggcccaccctgatgtcctcaccatcatgctgcagctctttgatgagggtcgc
ctcacagacggtaaggggaaaaccattgaatgtaaagacgccatcttcatcatgacctct
aacattgcaagtgatgaaattgcccagcatgcactgcagcttcgtcaggaagcagaagag
gccagccgcaggaagctggcggacaaactcgaggacgtacagaaaggggatgacgtcaaa
atctcccgacagtttaaagaaagtgtgattcgaccgatcctaaaggctcattaccggaga
gacgagtttctgggtcggatcaatgagatcgtatacttcctgccgttctgtcactcagag
ctgctgcagctggtcaccaaagagctcaacttctgggccaagaaggccaagcagcgccat
gacatcactcttcagtgggagcgcccggttctggacctgttggcaggggggtacaacatg
cactatggagcacgctccatcaaacatgaggttgagcggcgggtcgtcaaccagttagcc
gcggcgtacgagcaggagctgctgcccaaaggctgcacgctgcgtatcaccgtccaatca
gaggaccaggaggatccgagcacgcccagcctgcgcctggaggtggtcggagaggacagc
acatcgagaacgctggacatccgtccgccactcagccctgaacactaa
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