Trematomus bernacchii (emerald rockcod): 117470395
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Entry
117470395 CDS
T09643
Symbol
stx1a
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117470395 (stx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117470395 (stx1a)
Membrane trafficking [BR:
tben04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117470395 (stx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
AAA_13
ALIX_LYPXL_bnd
GNVR
Lzipper-MIP1
Lge1
FAN1_TPR
LMBR1
Spectrin_Anc-1
FUSC
Ferritin
Dna2
DUF848
FapA
Translin
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
117470395
NCBI-ProteinID:
XP_033971048
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MKDRMQELKHGKETTEEEDEVAVGMDKGFMDEFFEQVEEIRGFIESLAEKVEEVKRNHSA
ILASPNPDEKTKAELEDLMADIKKLANKIRSKLKSIQQSIEQEESQNKSSADLRIRKTQH
STLSRKFVEVMSEYNTTQSDYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDNITEQAMNEIETRHTEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGVVIASIVGGTLA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcatgcaagaactgaaacatgggaaggagacgacagaggaggaggatgaa
gtcgctgtggggatggacaaaggctttatggatgaattctttgaacaggtggaggagatc
cggggttttattgagtctctggcagagaaagttgaggaggtgaagaggaatcacagcgcc
atcctcgcttcacccaacccagatgagaaaaccaaggcggagctggaggatctcatggca
gacatcaagaagttggccaacaaaatacgctccaaattaaagagtatccaacaatccatt
gagcaagaagaaagtcagaacaagtcatcagctgacctgaggatacgcaagacgcagcac
tccacactgtctcgtaagtttgtcgaggtgatgtcagagtacaacaccacccagtcggat
tacagggagcgctgcaagggacgcattcagagacagctggagatcactgggagaaacaca
acaaacgaggagctggagagcatgttggagagtgacaacccggctatcttcacctccggg
atcattatggacaatatcacagagcaagctatgaatgagattgagacacggcacactgag
atcatcaagctggaaaacagcatcagagagcttcacgacatgttcatggacatggccatg
ctggtggagagccagggggaaatgatagaccgcatagagtacaatgtggagcactcagta
gactatgtggagagggcagtatcagacactaagaaggcggttaaataccagagtaaagcc
cggaggaagaaaattatgattattatatgctgtgtgattttgggagttgtcattgcctct
attgttgggggaacgctggcttaa
DBGET
integrated database retrieval system
