Trematomus bernacchii (emerald rockcod): 117470400
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Entry
117470400 CDS
T09643
Name
(RefSeq) protein jagged-1b isoform X1
KO
K06052
jagged-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
tben04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117470400
04371 Apelin signaling pathway
117470400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117470400
CD molecules [BR:
tben04090
]
Proteins
117470400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MNNL
EGF
EGF_TEN
hEGF
EGF_DL_JAG
DSL
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_2
cEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
117470400
NCBI-ProteinID:
XP_033971059
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MESTRAHKITRLYPRNGSGKITEMKSERPRGHLHLQRTVIFLLALTIQPQAVCAVGMFEL
QIYYYQNPLGLLQTGDCCDLQASGGQRCSARDQCDTIFHACLKEYQARVAPSGTCTFGSG
SSGILGGNSQTLRHRGHDGGGAGGEDGTNGHIVIPFKYAWPKSFSLVLEALDYDNDTSES
AMSQRSQNPAFKGQLIERVLLSSMLNPSEQWQTYRHHGQPLSLDYRLRFRCDSNYYGPFC
NKFCRARDDFFGHFNCDPSGNKVCMEGWTGPECKEAVCKQGCHQTHGSCTAPGECKCHYG
WKGTLCDQCMTFPGCVYGSCSEPWQCVCDVNWGGLLCDKDLNYCGTHQPCKNGGTCTNTE
PNEYHCECQEGFRGRNCDIVEHACLSSPCVNGATCVEDPTGFSCTCTDDWTGHTCAEAVK
QCDRSPCGRGATCQEAPGGYKCLCPPGWTGRTCQLDTNECEMSICVHARSCRNLIGGYLC
DCLPGWTGPNCDIRNSSCQGLCLNGGRCEDQVSGSRCLCPPGFLGKYCQNRESPCDSAPC
LHGGQCVEKDGRTITCNCPTGFSGSFCEIALDPCNPNPCQQGMACHSTEGRYTCACPEGY
YGHECMSLKTPCIGQHCPGAMSDTTHGGVSFYIILVGVITLVMVCGCAACAFILSHLHRK
RKKQQAVPQEEGINNQREFVNLIRNVDRPVPLLPPAAPPAHPPAPPALISRCYEEIELTL
PPSPAPSHPSPALKPAHGPKLDISNQEREKLNNFHYTETQELEA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagagcacaagagcgcacaagataacccggctctatccaagaaacgggagtggaaag
atcacggagatgaagagtgagcgaccccggggacacctccacctgcagcggactgtgatt
tttctcctcgcgctcacgatacaaccccaggctgtgtgtgcagtcgggatgttcgagctt
cagatctattactaccagaaccccctcggactcctgcagacgggagactgctgcgacctc
caggccagcgggggccagcgctgctctgccagggaccaatgtgacactattttccatgcc
tgcctcaaggagtaccaggcccgggtcgccccctctggaacctgcaccttcgggtcgggc
agctctgggatcctggggggaaattcccagacgctccgccaccgaggacacgatggagga
ggagcaggaggagaggatgggactaatggacacattgtcattcccttcaagtacgcatgg
ccaaagtccttctctctggtgctggaggctctggactacgacaacgacacgtcagaatca
gcaatgtcacagcgctcccagaacccagcatttaaaggtcagttgattgagcgagtcctg
ctgtcctccatgttgaaccccagtgaacagtggcagacgtaccgtcaccacggacagcct
ctcagtttagattaccggcttcgcttccgctgtgattcaaactattacggacccttctgc
aacaagttctgcagggcccgcgatgacttctttggacacttcaactgtgaccccagcggc
aacaaggtctgcatggagggctggacgggaccagagtgcaaagaagctgtatgcaagcag
gggtgtcatcagacccatggctcgtgtacggcacctggagaatgcaagtgtcattatggc
tggaagggcactctgtgtgatcagtgtatgacgttccccggctgtgtgtacggaagctgc
agcgaaccctggcagtgtgtgtgtgatgtcaactggggaggactgctgtgtgacaaagat
ctgaactactgtggcacccaccagccgtgtaagaacggtgggacatgcaccaacacagag
ccaaatgaataccactgtgaatgccaggaaggtttcagaggacgcaactgtgacattgtg
gagcatgcatgtttgtcgtccccgtgtgtgaacggagccacctgtgtggaggaccccacg
ggcttcagctgcacctgtaccgacgactggaccggacacacctgcgctgaagcggtgaag
cagtgtgaccggagcccctgcggccgtggagccacgtgtcaggaggctcctggaggctac
aagtgcctctgcccgccgggatggaccggcaggacgtgccagctggacaccaacgagtgt
gaaatgagtatatgcgtccacgcccgctcttgtcgaaacctgatcggtggatacctgtgt
gactgccttcctggatggacgggtcctaactgtgacatcaggaacagcagctgtcagggc
ttgtgtttgaacggcggtcgctgtgaggaccaggtatcagggtccagatgcttgtgtcca
cctggtttcttggggaaatattgccaaaatcgtgagagtccatgtgacagtgccccttgt
ctgcatggaggacagtgtgtggagaaggacgggaggaccatcacctgcaactgtcccaca
ggattttcaggatccttctgcgagattgcgttggatccgtgcaatcccaacccctgccag
caggggatggcctgtcacagcacagagggcaggtacacatgtgcatgcccagaaggctac
tatggtcatgagtgcatgagcctcaaaaccccctgcattggacaacactgtccaggtgcc
atgtctgacacgacgcacgggggggtcagcttctacatcatcctggtgggcgtcataact
ttagtgatggtgtgtggttgtgccgcctgcgccttcatcctgtcacacctccatcgaaag
cggaaaaagcagcaggccgtcccacaggaagaaggcatcaacaaccagagggagtttgtc
aacctcatcagaaacgtggaccgtcccgttcccctcctgccccccgccgccccgccagca
caccccccagcccctcccgccctcatatcacgttgctatgaggagattgaactgacgctg
ccgccctcccctgcaccttcacacccatctccagcactgaagccggcacacggccccaaa
ctggacatttcaaaccaggagagggagaagttgaacaacttccactacacagaaacccag
gagctggaggcctga
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