Trematomus bernacchii (emerald rockcod): 117470408
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Entry
117470408 CDS
T09643
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117470408 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117470408 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117470408 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117470408 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117470408 (si:ch211-11n16.2)
Membrane trafficking [BR:
tben04131
]
Autophagy
Other autophagy associated proteins
Others
117470408 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
117470408 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
GBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117470408
NCBI-ProteinID:
XP_033971072
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MSDILMKEMESISISPTKPEECPDGARSFLLVDEQENLQVRDETEFVDRLGCGDVAGVKV
LSIFGNTGDGKSHTLNHILFSGESVFYTSKSPSSCTVGVWAAYDPTLGLVALDTEGLLGA
AANQNQRMRLLLKVLAVSDIVVYRTRAERLHNDMFQFLSNASGAYLKHFTPELRALSSRC
GLDVPLSSLGPAVIIFQETTHTQLLAHDAKLSGHADTLLQKRFHELGLGTEAFSSVQYVG
TQTITPPTDYSRLLEAVKQQVKNTHTRSPRQPGIMFHALEALSERFCGELSDDKMIPYSF
FPDEYFTCSAVCLSCNIRCRNGMNHLRDRVPHLADGLCQYVHQYNNKVLICKRCYEGGRE
VIVLPKTSASSDNPWFGLAKYAWSGYVLECASCGVIYRSRQYWVGNQDPESGVVRSEVKH
VWEGSDTFLTTHQNAAQRVLDGMNYVIQSVSEYSTGPTKAVAAWVTDQVAPPYWRPNTEI
TACHGCRKVFEEAERKHHCRSCGEGFCHPCSSQRMPVPERGWGSGPVRVCKKCYQQGGPA
DTNSQVCKVEPRGLIARRVTEVAQSTLDMVTTAVDYPICFMKDVARPDYWVPDADITQCH
QCSKPFTPAISKHHCRACGQGVCGPCSTHIKPVPSRGWDHPVRVCEGCHARKDSL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacatactgatgaaggaaatggagagcatctcgatcagtccgacgaagcctgaa
gagtgtccagacggtgctcggagcttcctgctggtggatgaacaggaaaacctgcaggtc
cgtgatgagactgagtttgtggacaggctgggctgtggggacgtggcaggagtcaaggtc
ctctccatctttggaaacaccggcgatggcaagtcccacaccctcaaccacatcctcttc
agcggggagagtgtgttctacacctccaagtcccccagctcctgtacggtgggagtgtgg
gctgcgtatgaccccaccctcggcctggtcgccctggatactgaaggcctgttgggggcc
gcggccaatcagaaccagagaatgcggctgctgctaaaggtgctggcagtgtctgatata
gtggtctatcgtacacgggcagagcgcctccacaacgacatgttccagttcctgagcaac
gcgtcgggggcctacctgaagcacttcaccccggagctccgggccctctccagccgctgc
ggtctagatgtgcctctgtcgtctcttgggcctgctgtgatcatcttccaggagactacg
cacacccagctgctcgctcatgatgctaagttgtccggtcatgccgacacgctgctccag
aagcgttttcacgaactgggcctgggtacggaggccttcagctccgtgcagtatgttggc
acccagaccatcacaccccccactgactacagccggctgctggaggccgtcaagcagcaa
gtgaagaacactcacacacgctccccccgccagcccgggataatgtttcacgctctggag
gccctgagtgagcgtttctgtggagaactgtcagacgacaagatgatcccgtactccttc
ttcccagacgagtacttcacctgctctgctgtctgcctcagctgcaacattcgctgtaga
aatggaatgaaccatctgagagacagggtcccccacttggcagatggactgtgccagtat
gttcaccagtacaacaacaaagtccttatctgcaagaggtgttatgagggaggcagagag
gtgatcgttttgcccaagacgtcggcttcctctgataacccatggtttggattggccaag
tatgcgtggtcaggctatgtgttggagtgtgctagctgtggtgtaatctaccgcagcaga
cagtactgggtggggaaccaggaccctgagagcggcgtggtgcggtccgaggtcaagcac
gtctgggaggggtcggacacttttctgacgacccaccagaacgctgcccagagggtcctg
gacgggatgaactacgtgatccagtcagtgtcggagtacagcaccgggcccaccaaagct
gtggcagcctgggtcactgaccaggtggcccccccgtactggagacccaacacagagatc
actgcgtgtcatggctgcaggaaggtgtttgaggaggcggagaggaagcaccactgccga
tcgtgtggcgagggtttctgccatccctgctccagccagaggatgccggtgccggagagg
ggctggggcagtgggccggtccgggtctgtaagaagtgctaccagcagggagggccggct
gacaccaacagccaggtgtgtaaggtggagcctcgtggtctgatcgctcgcagggtgacg
gaggtggcgcagtctacactggacatggtcaccacagctgtggactaccctatctgtttt
atgaaagatgtggctcggccggattactgggtgccagatgcggacatcacccagtgccac
cagtgctccaaaccctttactccggccatatccaagcaccactgcagggcctgtgggcag
ggtgtgtgcggcccctgctccacacacatcaagcctgtgccctcccgaggctgggaccac
ccggtcagagtgtgtgaaggctgccacgcccgcaaggacagtctgtga
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