Trematomus bernacchii (emerald rockcod): 117470433
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Entry
117470433 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC3
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117470433
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117470433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
117470433
NCBI-ProteinID:
XP_033971102
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MMVQLYCWGDSSSGQLGPQTALSPVSWSVPGVITDISCGDQHTLLLNGEGGVLSCGNNSQ
GQLGRKNRKDGRTTGRVEGLGDVVAIACGQDHCLAVCASGKVFSWGAGEDGQRGLLPNLL
HNRPSHVQMPLPIPVIQVACGNSHSLALTKGGNVFSWGSNSHGQLGLGKEVSLQFVPDLV
RALTGVAVTQVTAGATHSLFLTLPGLVYCCGANKSGQLGLNRVDEKGRFNICMVPALRPL
GVSFISCGEAHSAVLTKDGKVFTFGEGSYGQLGHNSSNNEVKPRLVDALDGPASHISCGR
RHTLVLSSSGQLWAFGDGAKGQIGTGRTENSLTPTLVSLPWTTESVAAVPKDLKISAGWN
TSCTYTSPPQRFDKGQITGRLDETKLQQWLSMTHGNVEAKREISSMFQTNTSLVASFTKA
DGPPSEAGALTVDLDAASEAFDQMLAVPWIKQSVDLTLLIGLLCNSSRLLKSPEIFLILL
TCPLLQEECNVMQPVLALAINIVDLQEKTRDTLRRWWSTLKPSILMKHILVFKKALAFLL
RNGLLVTHNPGVKYLVEVLKMLHKTNKAGKSYKVPPSTFYVEEISDNVLLDQDIALWFRF
SKEEDDVDTPVIFCRYPFLFTLVQKVAVFNRYAFISKKVQGVLHELALACPEELWLDGPD
SAPAPVFQLTLRRSHLVEDTFRQLGAADHCAFKRELLVQFDEDRTKVMDVYKRDFFLQVF
EELMSPKSEMFMFNESNPLAWFPVRPKVEEKTYFLFGVLCGLALYHHNLVHLRFPLVLFK
KLLKVKPSLDDMKEFDPVMGESWQFLLDCPPDEVKQMDITFTVPWGGETVELDPKETGKV
VTASNRKEFVDAYVNYAFNKSVEGVFEAFKKGFFKVCDIDVVEFFQPEELQAVMVGQENY
DWEVFKKNTVYEGDYHDRHPNIVTFWEVFENLTAEEKKKLFLFVTGSYRVPFLGMESVQM
KVAVLPDSTEIDKPESLTCYRLLLLPVYQRYPAERTMHTRLLQAINHNRGFCKKADITE
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcagctgtactgttggggagacagctccagtggacagctcggtccacagacg
gccctcagcccggtgtcctggtcggtccccggggttatcaccgacatctcctgcggggac
cagcacactttactgctcaacggggagggcggcgtgttgtcatgtggaaacaactctcag
ggacaacttggacgaaagaaccgtaaagatgggagaacaacaggtcgtgtggaggggctg
ggcgatgtggtggccatagcttgtggtcaggaccattgtctggctgtgtgtgcatctgga
aaggtgttctcctggggggcaggagaggacggacagagaggccttttaccaaatctactc
cacaacagaccaagtcatgtgcagatgccactgccaatacctgtgattcaagttgcttgt
ggaaactcccactctctggctctgactaaaggaggcaatgtcttctcgtggggttcgaac
agtcatggtcagctaggcctggggaaggaggtgtcgctgcagtttgtacctgacctggtg
cgcgctctgaccggcgtagcggttacccaggttacggccggagcgacccactccctgttc
ctcacactcccaggcctggtgtactgctgcggggccaataaatctggccagctgggtctc
aacagggtggatgagaagggcaggttcaacatctgcatggtacccgccctcagacctctg
ggtgtctccttcataagctgtggagaagcacactctgctgtgttaactaaggacggcaag
gttttcacttttggagagggaagctacggtcagctgggtcacaactcctctaataatgaa
gtgaaacccagactggtggacgctttggatggacctgcatcacacatttcctgtggcaga
cgtcatacactggttttgtcctcctctggccagctgtgggcttttggtgatggggccaaa
ggtcaaattgggacaggacgaacagaaaatagtctgactcccactctggtatctcttcca
tggaccactgaaagtgtggcagccgtccccaaggacttgaaaatatcagctgggtggaat
acaagctgtacctacacttcacctccacagcgttttgacaaaggacagataactgggcga
cttgatgagaccaaacttcaacaatggctgtcaatgacacatggcaacgtagaggcaaag
agagaaatatcttccatgtttcagacaaacacaagtcttgttgcaagtttcacgaaggct
gatgggcctccatcagaagcaggtgctctaactgtggaccttgatgcagctagcgaagct
ttcgaccagatgctggcagtgccatggatcaaacaatcagtagatcttacactcctgatt
ggcttgctctgcaattcaagccgtctcctaaaatcaccagaaatcttcctgattctgctg
acgtgtcccctcctccaagaggagtgtaatgtcatgcagccggtgttggcgctggcgatc
aatattgttgatctgcaggagaagactcgagatacactaagacgctggtggtccactctg
aaaccctccatactgatgaagcacatcttggtgttcaaaaaggccctggccttcctgctc
agaaatggcctcctggtaactcataaccccggagtcaaatacctggtggaggtcctcaag
atgctgcacaaaacaaacaaagctggaaagtcctacaaagtcccaccgagcaccttctac
gtagaggagatcagtgacaatgtgctgctagatcaggacattgctctttggtttcgattt
tccaaagaggaggatgatgtcgacacacccgtcattttctgccgctacccattcctgttc
actctggttcaaaaggtggcagtctttaaccgctatgcgttcatctcaaagaaagtgcag
ggtgtccttcatgaactggccttggcgtgtcctgaagagctctggttggacggcccagac
tccgcccccgcgccggtcttccagctcaccctgagacgctctcacttggtggaggacacc
ttcaggcagctgggggcggccgaccactgcgccttcaaaagggagcttttggtgcaattt
gatgaagacaggacgaaggtgatggatgtctacaaaagagatttcttcctgcaagtgttt
gaagagctgatgtctcccaagtctgaaatgttcatgttcaatgagagcaaccctctggcc
tggttccctgtcaggccaaaagtagaggagaagacttacttcctgtttggcgttctgtgc
ggcctggctctctaccaccacaaccttgttcacttgcgcttcccactggttctcttcaag
aagctgctcaaggtcaaaccctcactggacgacatgaaggagttcgaccctgtcatggga
gagtcttggcagttcctgttggactgccctcctgatgaggtcaaacaaatggacattact
ttcactgtgccctggggcggagagacagttgaacttgatccgaaagaaactgggaaagtt
gtgaccgcgtccaacaggaaagagtttgtagacgcctacgtcaactatgccttcaacaaa
tcagtggagggagtgtttgaagcgttcaagaaaggcttcttcaaggtgtgtgacatcgat
gtggtggagttcttccagcccgaggagctgcaggcagtgatggtgggccaggagaactac
gactgggaggtgttcaagaagaatacagtgtatgaaggagactaccatgacaggcatcca
aacattgtgaccttctgggaggtgtttgagaatctgaccgcggaggaaaagaaaaagtta
tttctgttcgtcaccggctcctaccgtgttcccttcctgggtatggagagcgttcagatg
aaagtcgcagtgttgcccgattccaccgagatcgataagccagaatccctcacctgctac
cgtctgctgttactgcccgtctaccagaggtacccggccgagaggaccatgcacaccagg
ctcctccaggctattaatcacaacagaggcttctgtaagaaagcagacattacagaatga
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