Trematomus bernacchii (emerald rockcod): 117470435
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Entry
117470435 CDS
T09643
Symbol
shox2
Name
(RefSeq) short stature homeobox protein 2
KO
K09331
short stature homeobox protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117470435 (shox2)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117470435 (shox2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
KBP3
AcrF31
Motif
Other DBs
NCBI-GeneID:
117470435
NCBI-ProteinID:
XP_033971104
LinkDB
All DBs
Position
Unknown
AA seq
302 aa
AA seq
DB search
MMEELTAFVSKSFDQKVKEKKEVITYREVLETGSTRAGSRESLTAEPGSREEAAAVTRNG
ALSPGRETDMLSPERIRDAGSPKLIDGNTDVKERKEDSKPLDDEAQTKIKQRRSRTNFTL
EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIG
AANQFEACRVAPYVNVGALRMPFQQDSHCNMPPFSFQVQAQLQLDSAVAHAQHHLHSHLA
AHAPYMMFPAPPFGLPLATLAAESASAASVVAAAAAAKNTSKNSSIADLRLKAKKHTAAM
GL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagagctcaccgctttcgtgtctaagtctttcgatcagaaagtgaaggagaag
aaggaagtgataacctacagggaggtgttggagaccggctcgacgcgagcaggcagcagg
gagtctttaaccgcggagccggggagccgggaggaggctgcagccgtcacccggaacggt
gcgctctcgccgggcagggaaacggacatgctcagcccggagagaatcagggacgccggg
agccccaaactcatagacggcaacacggacgtgaaagaaaggaaagaggactcgaagcca
ttagatgacgaggcacagactaaaatcaaacagaggagaagtcggactaacttcacatta
gagcagctcaacgagctggagcggctcttcgacgagacccactacccggacgccttcatg
cgggaggagctgagccagcgactgggactgtcggaggcccgagtacaggtttggttccag
aatagaagagccaaatgcagaaagcaggagaaccagttacataaaggagtcctgattgga
gcagcgaatcagtttgaagcttgtcgtgtagcgccatatgtcaacgtgggggctttacgg
atgccattccaacaggatagtcattgcaacatgccgcccttctcctttcaggtgcaggcg
caactgcagctggacagcgccgtggcccacgcgcagcaccacctgcactctcacctggca
gcgcacgcgccctacatgatgttccccgcgccgccgttcgggttgcccctggcgacgctc
gcggccgagtctgcctccgcagcctccgtggtggccgccgctgccgccgccaaaaacacg
agcaagaactccagcatcgcagacttgagactgaaggccaagaagcacacggccgcgatg
ggactgtga
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integrated database retrieval system
