Trematomus bernacchii (emerald rockcod): 117470436
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Entry
117470436 CDS
T09643
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117470436
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117470436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
DndB
Motif
Other DBs
NCBI-GeneID:
117470436
NCBI-ProteinID:
XP_033971105
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MMQTLSPCGDMMVQLFCWGDSSSGQFGPQSALSPVSWSVPGVITDICCGDQHTLLLNGEG
GVLSRGNNSQGQLGRKKNRKDGRTTGRVEGLGDVVAIACGQDHCLAVCASGKVFSWGAGE
DGQRGLLPNLLHNRPSHVQMPLPIPVIQVACGNSHSLALTKGGDVFSWGSNRHGQLGLGK
KVSRQFVPDLVRALTGVAVTQVTAGATHSLFLTLPGLVYCCGANKSGQLGLNRVDEKGRF
NICMVPALRPLGVSFISCGEAHSAVLTKDGKVFTFGEGSYGQLGHNSSDNELKPRLVDGL
DGPASHISCGRRHTLVLSSSGQLWAFGDGAKGQIGTGRTENSLTPTLVSLPWTTEGVAAV
PKADLKISAGWNTSCTYTSPPQRLDKGQITGRLDETKLQQWLSMTHGNVEAKREISSMFQ
TNTSLVASFTKADGPPSEAGALTVDLDAASEAFDQMLAVPWIKQSVHFELLICLLFNSSC
PLKSPEIVLILLTCPLLQEECNVMQGVLMLAIIIVELQEKTQDTLRRWWSTLRPSILMKH
ILVFKKALAFLLRNGLLVTHNVGVKYLVEVLKMLYKANKAGKSYKVPPSTFYVEEISDNV
LLDQDVALWFEFSKEEDDVKTPVIFCRYPFLFTLVRKVAVFNFYAFISKKVQGFVYGLAL
ACPEELRLDGPDSAPAPVFQLTLRRSHLVEDTFRQLGAADHCAFKRELLVQFDDDRTKVM
DVYKRDFFLQVFEELMSPKSEMFMFNESNPLAWFPVRPKVEKKTYFLFGVLCGLALYHHN
LVHLRFPLVLFKKLLKVKPSLDDMKEFDPVMGESWQFLLDCPPDEVKQMDITFTVPWGGE
TAELDPKETGKVVTPSNRKEFVDAYVNYAFNKSVEGAFEAFKKGFFKVCDIDVVEFFQPE
ELQAVMVGQENYDWEVFKKNTVYEGDYHDRHPNIMTFWEVFENLTAEEKKKLFLFVTGSY
RVPFLGMESVQMKVAVLPDSTEIDKPESLTCHRLLLLPVYQRYPAERTMHKRLLQAINHN
RGF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagacactgagtccatgtggagacatgatggtgcagctgttctgttggggagac
agctccagtggacagttcggtccacagtcagccctcagcccggtgtcctggtctgtcccc
ggggttatcaccgacatctgctgcggggaccagcacactttactgctcaacggggagggc
ggcgtgttgtcacgtggaaacaactctcagggacaacttggacgaaagaagaaccgtaaa
gatgggagaacaacaggtcgtgtggaggggctgggcgatgtggtggccatagcttgtggt
caggaccattgtttggctgtgtgtgcatctggaaaggtgttctcctggggggcaggagag
gacggacagagaggccttttaccaaatctactccacaacagaccaagtcatgtgcagatg
ccactgccaatacctgtgattcaagttgcttgtggaaactcccactctctggctctgact
aaaggaggcgatgtattctcgtggggttcgaaccgtcatggtcagctaggcctggggaag
aaggtgtcgcggcagtttgtacctgacctggtgcgcgctctgaccggagtagcagttacc
caggttacggccggagcgacccactccctgttcctcacactcccaggcctggtgtactgc
tgcggggccaataaatctggccagctgggtctcaacagggtggatgagaagggcaggttc
aacatctgcatggtacccgccctcagacctctgggtgtctccttcataagctgtggagaa
gcacactctgctgtgttaactaaggacggcaaggttttcacttttggagagggaagctac
ggtcagctgggtcacaactcctctgataatgaactgaaacccagactggtggacggtttg
gatggacctgcatcacacatttcctgtggcagacgtcatacactggttttgtcctcctct
ggccagctgtgggcttttggcgatggggccaaaggtcaaattgggacaggacgaacagaa
aatagtctgactcccactctggtatctcttccatggaccactgaaggtgtggcagccgtc
cccaaggcagacttgaaaatatcagctgggtggaatacaagctgtacctacacttcacct
ccacagcgtttggacaaaggacagataactgggcggcttgatgagactaaacttcaacaa
tggctgtcaatgacacatggcaacgtagaggcaaagagagaaatatcttccatgtttcag
acaaacacaagtcttgttgcaagtttcacgaaggctgatgggcctccatcagaagcaggt
gctctaactgtggaccttgatgcagctagcgaagctttcgaccagatgctggcagtgcca
tggatcaaacaatcagtacatttcgaactccttatttgtttgctcttcaattcaagctgt
cccctaaaatcaccagaaatcgtactgattctgctgacgtgtcccctcctccaagaggag
tgtaatgtcatgcagggggtgttgatgctggcgatcattattgttgaactgcaggagaag
actcaagatacactaagacgctggtggtccaccctgagaccctccatactgatgaagcac
atcttggtgttcaaaaaggccctggccttcctgctcagaaatggcctcctggtaactcat
aacgtcggagtcaaatacctggtggaggtcctcaagatgctgtacaaagcaaacaaagct
ggaaagtcctacaaagtcccaccgagcaccttctacgtagaggagatcagtgacaatgtg
ctgctagatcaggacgttgcactttggtttgaattttccaaagaggaggatgatgtcaag
acacccgtcattttctgccgctacccattcctgttcactctggttcgaaaggtggcagtc
tttaacttctatgcgtttatctcaaagaaagtgcagggtttcgtttatggactggccttg
gcgtgtcctgaagagctcaggttggacggtccagactccgcccccgcgccggtcttccag
ctcaccctgaggcgctctcacctggtggaggacaccttcaggcagctgggggcggccgac
cactgcgccttcaaaagggagcttttggtgcaatttgatgacgacaggacgaaggtgatg
gatgtctacaaaagagatttcttcctgcaagtgtttgaagagctgatgtctcccaagtct
gaaatgttcatgttcaacgagagcaaccctctggcctggttccctgtcaggccaaaagta
gagaagaagacttacttcctgtttggcgttctgtgcggcctggctctctaccaccacaac
cttgtccacttgcgcttcccactggttctcttcaagaagttgctcaaggtcaaaccctca
ctggacgacatgaaggagttcgaccctgtcatgggagagtcttggcagttcctgttggac
tgccctcctgatgaggtcaaacaaatggacattactttcactgtgccctggggcggagag
acagctgaacttgatccgaaagaaactgggaaagttgtgacaccgtccaacaggaaagag
tttgtagacgcctacgtcaactatgccttcaacaaatcagtggagggagcatttgaagcg
ttcaagaaaggcttcttcaaggtgtgtgacatcgacgtggtggagttcttccagcccgag
gagctgcaggcagtgatggtgggccaggagaactacgactgggaggtgttcaagaagaat
acagtgtatgaaggagactaccatgacaggcatccaaacatcatgaccttctgggaggtg
tttgagaatctgaccgcggaggagaagaaaaagttatttctgttcgtcaccggctcctac
cgtgttcccttcctgggtatggagagcgttcagatgaaagtcgctgtgttgcccgattcc
accgagatcgataagccagaatccctcacctgccaccgtctgctgttactgcccgtctac
cagaggtacccggccgagaggaccatgcacaagcggctcctccaggctattaatcacaac
agaggcttctga
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