Trematomus bernacchii (emerald rockcod): 117470501
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Entry
117470501 CDS
T09643
Symbol
deaf1
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog isoform X1
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117470501 (deaf1)
03019 Messenger RNA biogenesis [BR:
tben03019
]
117470501 (deaf1)
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
117470501 (deaf1)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117470501 (deaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAND
zf-MYND
Motif
Other DBs
NCBI-GeneID:
117470501
NCBI-ProteinID:
XP_033971192
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MDEADSATKALGLHEEVEHEEVGSDTESEAEVTTISVMEEPGNIDMGAESLPNSDEAEAA
FGEVTAVTVGDVHCADDNVYTTTVATSGSLPEHVLSRGTTLQLGDGLSTQKATLIVVHTN
GSIVQATGLKSAAAMVTGSQTHPTPLMPPQDKDSCSKYNWDPSVYNSELPVRCRNSSGVL
YKNRLGSGGKGRCIRHNQQWFTPTEFEGLAGRASSKDWKRSIRYAGRPLLCLIQERILNP
HAASCTCAACCDDLTGCAKDEEPLVAENISMTGPVRLFVPYKRRKKDSESLVVSPKKDLS
SAKNITLSPGTTFTVSPSGQFTTSGTLTFDRPAQSDAVTAAAAAAIMSESSAQSEVFAST
AVLTALPALAVAPQSLQAKMAVTVGSPSGGGLLMGGLEGGGASEGGRSSSWLYLEDMANT
LQSNVQQLKALIEQAKHSECMGVKGQGGRKEFGLTQTFQNQITFQQQDDSDAKRSSDITE
IIINQMCVNCGRMAMSECTGCHKVNYCSTFCQRKDWKEHQHTCCQSSGGVSVQEEEPITA
LELDKVK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagccgactcggccacgaaggcgctcgggttgcacgaggaggtggagcacgag
gaggtgggctcggataccgaatcggaggccgaagtcaccacgatttccgtgatggaggaa
ccggggaacatcgacatgggagccgagtccctgccgaactcagacgaggccgaggcggct
tttggagaggtgacggctgtgacggtgggagacgttcactgtgcggacgacaacgtttac
acaaccacggtcgccacgtcaggaagtctgcctgaacacgtgctgagcagaggaaccacc
ctgcagctgggtgatggtctcagtacccagaaggccacgctgatcgtggttcacaccaac
ggcagcatcgtccaggcaaccggcctcaaatctgctgctgctatggtaacaggctctcag
actcatcccactcctttgatgcccccccaggacaaagactcctgctccaagtacaactgg
gacccttcggtttacaacagcgagctgccggtgcgctgcaggaactccagcggggtcctg
tacaagaaccggctgggatcaggggggaagggccgctgcatcagacacaaccagcagtgg
ttcactcccacagagtttgaaggtctggcggggcgagcgagcagcaaagactggaagaga
agcatccgatacgccggcaggccgctgctctgcctcatacaggagcgtatcctgaaccct
cacgctgcctcctgtacgtgtgcagcctgctgtgatgacctcacggggtgtgcaaaggat
gaagaacctctggtagcagaaaacatcagcatgacgggtccggtccgcctcttcgtcccg
tacaagagacggaagaaggacagcgaatctctggtcgtttccccgaagaaggatctttct
tccgccaaaaacatcacgctgtccccggggacaacattcacggtgtctccgtcgggacag
ttcacgacctcgggcacgttgacctttgaccgcccggctcagagtgacgctgtcacggcc
gccgctgctgctgccatcatgtcggagagctcggcccagagcgaggtgttcgccagcacc
gcagtgctcacggcgctacctgccctcgccgtggccccccagtcgctgcaggccaagatg
gcggtgacggtggggtcaccgtcggggggggggctgctgatggggggcctggaggggggc
ggggccagcgagggggggcggagcagcagctggctgtacctggaggacatggccaacact
ctgcagagcaacgtgcagcagctgaaggctctgatagaacaggccaaacactcagagtgc
atgggggtcaaaggtcagggcggcaggaaggagtttggtctcactcagacgtttcagaat
cagatcacgtttcagcagcaggacgactcggatgccaagaggagctctgacatcaccgag
atcatcatcaaccagatgtgtgtgaactgcgggcgcatggcgatgagtgagtgcacgggc
tgccataaggtcaactactgctccaccttctgccagaggaaggactggaaggagcaccag
cacacctgctgtcaatcatctgggggcgtgtctgttcaggaagaggagccaatcacagcc
ctggaactggacaaagtcaaatga
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