Trematomus bernacchii (emerald rockcod): 117470742
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Entry
117470742 CDS
T09643
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117470742 (ascc3)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117470742 (ascc3)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117470742 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
nSTAND3
AAA_19
Helicase_PWI
UvrD-helicase
DUF7574
YxiG
Motif
Other DBs
NCBI-GeneID:
117470742
NCBI-ProteinID:
XP_033971486
LinkDB
All DBs
Position
Unknown
AA seq
2190 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKKEDFNEQLYDLKTKRLKRRELFAREGLTWQKIVHLCSEHQDN
AKQQAELKSLLQAAKEIVGTEHGQAAVESAAVFLFETFHNKDHVGTEETRAIKQMFGPFP
SSAAEASCACVARLVAPLGDSRVENFIQSLSSRHNPQRGPSFGRNIVFSYDCYALDPLEE
LPCSDVNEENASLDFINFLNHQQSGRNVASEEASGSSLSSGEGAILRSEVEKYLNGGNMI
SSSPEELCTSLFEMLTSHKSDDELQNELFELLGPEGLEMISTLLQRRAAIVDSLISMPPD
RTGYTPDVSRLAIGEAKPTFACQVTIQSEQEKQMMKLYRREEKRERKRGKGGEEGESSDA
ALTFDPREMRTQREQALLTARRDPILSRERVYERIRYPNVYDCHAEAAKTPAFVGGAKMM
LPEGIRRENTKMYEEVEIPPNDPMPIGFEEKPVFISELDEIAQLVFKGMKRLNRIQSLVF
ETAYNTNENLLICAPTGAGKTNIAMLTVLHVINQHLQPGGVIKKDEFKIVYVAPMKALAA
EMTNYFGKRLEPLGITVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGDVALSQI
VRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVASFLHVN
PYIGLFFFDSRFRPVPLGQTFVGVKATNKIQQLHDMEEICYNKVLEQVKEGHQVMVFVHA
RNATVRTAMGLIEMAKNHGEICVFQPNQGADYGHCEKQIQRSRNKEMKEMFPEGFGIHHA
GMLRSDRSMMESMFSKGHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGTLVDLGIL
DVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLDRLADNLNAEIAL
GTVTNVEEAVKWLSYTYLFVRMRANPLAYGINHKAYQMDPSLMLYRKELVVEAGRKLDKA
RMIRFEERTGYYASTDMGRTASHFYIRYNTIETFNEMFNSQRTEADIFSIVSKAEEFDQL
KVRDEELEELDQLLSNYCELPAAGGVENGYGKINVLLQTYISRGEVDSFSLISDLGYVAQ
NSARIVRALFEIALRKRWPAMTYRLLTLCKVIDKRLWGFAHPLRQFPNLSHLVLNRLEEK
KLTVDKLKEMRKDEIGHMLHHVNIGQSVKQCAHQIPAITMEANIQPITRTVLRVRLVITP
DFRWHDQVHGSVGEPWWLWVEDPINDHIYHSEHILLQKKQVVSEEPQHIVFTIPIFEPLP
SQYYIRAVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNPEFESLFKF
THFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFSQYPGAKVVYIAPMKAL
VRERIEDWKVRIEEQLGKKVVELTGDVTPDMRAISQADLIVTTPEKWDGVSRSWQNRSYV
QKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKRVRVVGLSTALANARDLADWLG
IGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSS
RRQTRLTALDLIAYLATEDNPKQWLHQDEREIEAIIATVRDSNLKLTLAFGIGMHHAGLH
ERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKTRRYVDYPITDVL
QMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAEVAAGTI
SSKQDAMDYITWTYFFRRLVMNPSYYNLEDVSHESINKFLSNLVEKSLRDLECSYCLEIK
EDDQTIEPLTYGRISSYYYLKHQTIRTFKERLRAELPLHELLSVLTDAEEFSELPVRHNE
DQLNSQLAQQLPLKVNPHSYDSAHTKTHLLLQAHFSHAQLPCSDYNTDTKTVLDNTIRVC
QAMLDVAANEGWLVAALSICNLVQMVVQGRWLHDSPLLTLPHVEQQHLYLFSKWANKKGR
SSGGGSSGQIEGLPELIAACNGKESVFAAIVGQELQSSQIAQAWSFLSHLPVLEVELSVK
GWWEASREQTERRLPAAGAQRGGEGGWLQVHADQEYVLQVALRRINAGQQRRKQDSKAQA
PRFPKLKDEGWFLVVGEVDRRELLAVKRIGYVRQRTAVSVAFYTPEKTGKCIYTLYLMSD
CYLGLDQQYDIHLNVTAASISAQVNTEVTQ
NT seq
6573 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcctcgactcacaggggctctgcgctccttctccactgtcagcaagaaggag
gattttaatgaacagctctacgatctgaagaccaagcggctgaagaggcgggagctgttt
gccagagagggtctgacgtggcagaagattgtccatctctgctccgagcatcaggacaac
gctaaacagcaagctgaactgaagagcctccttcaggcagccaaggaaattgtggggact
gaacatgggcaggccgccgttgaaagtgcagctgtgtttctgtttgagaccttccacaac
aaagaccatgtgggcacagaggagacccgggcaatcaagcagatgttcgggcccttcccc
tcctctgcagctgaggcctcctgtgcctgtgtggctcggctggtggctccactcggagac
tccagggtggagaactttatccagagcctgtcctcccgtcacaacccccaacgaggccct
tcttttggacgtaacatcgtcttctcgtatgactgctatgctctggacccgctggaggag
ctgccctgctctgacgtcaacgaggagaacgcgagtctcgacttcatcaacttcctcaac
caccagcagagcgggaggaatgtcgccagtgaggaagcttcaggaagttctctgagctct
ggggagggagccatcctgagatcagaggtggagaagtatctaaatggaggcaacatgatc
tcatccagcccggaggagctatgcacctccctgtttgaaatgctgacctcccacaagagc
gacgacgagctgcagaatgagctgttcgagctgctgggcccagaggggctggagatgatc
tccaccctcctccagcgaagggcagctatcgtggactccctcatctctatgccacctgac
aggactggctacacaccagatgtgagccgattagccattggagaagccaagcccaccttt
gcgtgccaggtgaccatccagtcagagcaggagaaacagatgatgaagttgtaccgcaga
gaggagaagagagagaggaagagagggaaaggaggagaagaaggcgaatcctcagatgct
gccctgacctttgacccccgagagatgagaactcagcgggagcaggcgctgctgactgca
cggcgggatcctatactgagcagagagagagtgtacgaacgtatccgatatcccaacgtc
tatgactgccatgcagaggccgcaaagacgcctgcgtttgttggtggagccaagatgatg
cttcctgagggaatccgcagagagaacactaagatgtatgaagaggtggaaatcccaccc
aacgatcccatgcccatcggctttgaagagaagcccgtcttcatctctgaactggatgag
atcgcacagctggtgtttaagggcatgaagcgtctgaacaggatccagtctctggtgttt
gagacggcctacaacaccaacgagaacctcctgatctgcgctcccaccggcgccggcaag
accaacatcgccatgctgaccgtgcttcatgtgatcaaccagcacctgcagcccgggggg
gtcatcaagaaggacgagttcaagatcgtgtacgtggctccgatgaaggccttggcagct
gagatgactaattacttcggtaagcgattggagccactgggcatcacagttaaagaactc
accggggacatgcagctaaccaaaggagagatcctacgaacacagatgttggtgacgact
ccagagaaatgggatgtagtgaccaggaagagtgttggagacgtggctctctcccagatc
gtgcgtctcctcatcctggatgaagtccacctcctacatgaggaccgaggaccggttctg
gagagcctggtggcccgcaccatcagacaggtggaatccacccagagtatgatcaggatc
ctgggactctcagccacgctgcccaactacctggacgtggcctccttcctgcacgtcaac
ccctacatcggcctgtttttcttcgacagtcgcttcagacccgtgcccctcggacagacc
tttgttggcgtcaaagccacaaacaagatccagcagcttcatgacatggaggagatttgt
tacaacaaagttctggagcaggttaaagaaggtcatcaggtgatggtgtttgtccacgcc
cgtaatgccacagtgaggacggcaatgggtctgatcgagatggccaagaaccatggagag
atatgcgtcttccaaccaaaccagggggcagactacggccactgtgagaaacagatccag
cgctccagaaacaaggagatgaaggagatgttcccagaaggctttgggatccatcatgcc
ggcatgctgcgctccgaccgcagcatgatggagagcatgttctccaaaggccacctgaag
gtgctggtgtgcaccgccactctggcctggggagtcaacctgccggcacacgcagtcatc
atcaaggggactcaaatctacgatgccaagcgtgggaccctggtggatctgggcatcctg
gacgtcatgcagatctttggacgtgcaggtcgtccgcagtttgacaagtacggtgagggc
accatcatcaccacccatgacaaactgagccactacctgaccctgctcacccagcagaac
cccatcgagagccagttcctggacaggctggccgacaacctgaacgctgagatcgctctg
gggaccgtcaccaacgtggaggaggctgtgaagtggctcagctacacctacctgtttgtc
cgcatgagggccaacccactggcatacggcatcaaccacaaggcctatcagatggacccc
tccctgatgctgtacaggaaggagctggtggtggaggccggcaggaagctggacaaggcc
cgcatgatccgcttcgaggagcgcaccgggtactacgcctccaccgacatgggcaggacc
gccagccacttctacatcagatacaacaccatcgagaccttcaatgaaatgttcaactct
cagaggacagaagcagacatcttcagcatcgtgtccaaggctgaggagtttgaccagctg
aaggtgcgtgacgaggagctggaggagctggaccagctgctgagtaactactgtgagctg
ccggctgcagggggggtggagaacggctacgggaagatcaacgtgctgctgcagacctac
atcagccggggggaggtggacagcttctccctcatctctgacctgggctacgtggctcag
aactctgctcgtatcgtcagggctctgtttgagatcgctctgaggaagcggtggccggcc
atgacctaccgcctgctcaccctctgtaaggtgatcgacaagcggctgtggggcttcgcc
caccccctccgtcagttccccaacctcagccacctggttctgaaccgcctggaggagaag
aagctcaccgtggacaagctgaaggaaatgaggaaggatgagatcggtcacatgctgcac
catgtgaacatcggacagtcggtcaaacagtgtgcccaccagatccctgccatcaccatg
gaggccaacatccagccaatcacacgcaccgtgctccgcgtgcggctcgtcatcacgcct
gacttccgctggcacgaccaggtccacgggtcagtgggtgagccctggtggttgtgggtg
gaggaccccatcaatgaccacatataccactctgagcacatcctgctgcagaagaaacag
gtggtgtcagaggagcctcagcacatcgtgttcaccatccctatctttgagccgctgccc
tctcagtactacatcagggcggtgtccgaccgctggctgggggcagaggccgtctgcatc
attaacttccagaacctcatcttacccgagagacaccccccacacactgagctgctggac
ctgcagcctctcccggtgacggctctgggtaacccggagtttgagagcctgttcaagttc
actcacttcaaccccatccagacgcagatcttccacacgctgtaccacaccgacaccaac
gtcctgctgggggcgccaacgggctccgggaagaccatcgccgcagagatggccatgttc
agggtcttcagccagtatcccggcgctaaggtggtgtacatcgcccccatgaaggccctg
gtcagagagaggatcgaggactggaaggtcaggattgaggagcaactggggaagaaagtg
gtggagctgacaggggacgtgacccccgacatgagagctatatcacaggctgacctcatc
gtcaccactccggagaaatgggacggagtgagcaggagctggcagaacagaagctatgtt
cagaaagtggccatcctcatcatcgatgagatccacctgctgggggaggacagaggtcca
gtgttggaggtgattgtgtccaggaccaacttcatctcctctcacacgtctaagagagtc
cgagtggtgggtctgtccacggctctggccaacgctcgagacctggccgactggctgggc
atcggacaggtgggtttgtttaacttccgcccatctgttcgccctgtaccgctggaagtt
cacatccatggtttcccggggcaacactactgccctcgcatggccagcatgaacaagcct
accttccaagcgatacgcagccactccccagccaaaccagtgctgatctttgtctcctcc
cgacggcaaacccgactgaccgccctggacctgatcgcctacctggccacagaggacaac
cccaaacagtggctgcaccaggacgagagagagattgaggcgatcattgccacagtgagg
gattccaacctgaagctgacgctggccttcgggatcggcatgcatcatgcaggcctgcac
gagagggacaggaagaccgtggaggagctgttcgtcaactgcaagatccaggttctgata
gccaccagcactctggcctggggggtgaacttccctgctcacctggtggtcgtcaaggga
acggaatactacgatggcaaaaccaggcgctacgtggactaccccattacagatgttctg
cagatgatggggcgagcaggtcggcctcagtttgatgaccagggcaaagctgtgatcctc
gtccatgacatcaagaaggatttctacaagaagttcctctatgagccgttccctgtggag
tccagcctcctcagtgtgctgtcagaccatctgaatgcggaggtggctgcaggaaccatc
tcctccaaacaggacgccatggactacatcacctggacctacttcttcaggcggctggtg
atgaaccccagttattacaacctagaagacgtcagccacgagtccattaacaagtttctg
tccaacctggtggagaagagcctgcgggacctggagtgctcttactgcttagagataaaa
gaggatgatcagaccattgagccactgacctatggtcgcatctcgtcctactactacctg
aagcaccagaccatccgcaccttcaaagagcggctgagagccgagctgcccctccacgag
ctgctctccgtcctcaccgatgcagaagagttttcggagctgcccgtcagacacaacgag
gaccagctgaacagccagctggctcagcagctccccctgaaggtcaacccacattcctac
gacagcgcccacaccaagacccacctgctgctgcaagcccacttcagccacgcccagctg
ccatgcagcgactacaacaccgacaccaagacggtgctggacaacaccatacgagtctgt
caggctatgctggatgtagctgctaacgaaggctggctggtggccgctctcagtatctgt
aacctggtgcagatggtggtgcagggccgctggctgcacgactcccccctgctgaccctg
cctcatgtggaacagcagcacctctatctgttcagcaaatgggcaaacaagaagggaagg
agcagtggggggggctccagcgggcagatcgaaggacttcctgagctgatcgctgcctgc
aacgggaaggaaagtgttttcgctgccattgtcggccaagagcttcaatccagtcagatc
gcccaggcctggtccttcctgagccacctcccggtgctggaggtggagctgagtgtgaag
ggctggtgggaggcgagccgggagcagacggagcgccgcctccccgcagcaggagcccag
cgggggggggagggtggctggctgcaggtccacgctgaccaggagtacgtcctgcaggtc
gctctgagacgcatcaacgcgggccagcagaggaggaagcaggacagcaaggcgcaggct
cccaggttccccaaactgaaggatgaaggctggttcctggtggtgggggaggtggaccgc
cgggagctgctggccgtcaaacggatcggatacgtccgccagcgcacagctgtgtccgtg
gccttctacactccagagaagaccgggaagtgcatctacaccctgtacctgatgagtgac
tgctatctgggtctggaccagcagtacgacatccacctgaacgtaacagccgccagcatc
agtgctcaggtgaacacagaggtgactcagtga
DBGET
integrated database retrieval system
