Trematomus bernacchii (emerald rockcod): 117470756
Help
Entry
117470756 CDS
T09643
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04621
NOD-like receptor signaling pathway
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117470756 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117470756 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117470756 (nod1)
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117470756 (nod1)
BRITE hierarchy
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_4
AAA_16
AAA_22
RsgA_GTPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117470756
NCBI-ProteinID:
XP_033971516
EnsemblRapid:
ENSTBNG00005024329
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MGQREEVRPSCLSLLTYHRELLVSRLRSVPCILDNLLASGFVCEEDVEIVQRTATKTDQV
RKILELVQCKGEEACEYFIYIIYKVCDAYVDLQPWLKDINFNPSSEVALLDVVNTDPISR
FSEKLRRGMSQDTSFIMSYGQREETRLEELYTDTLMELLNDCNESLGFLESLHTLLGDHA
VFNPQGETISVMGDAGVGKSILLQKLQNLWSNKELQTDAIFFFKFRCRTFSLFKDSEQMS
LRELLFKHNCCPDHDPDDEVFEFILRFPEKVLFTFDGYDEIQMNDLMNVAEVGSPDVKAH
PLQLLISLLCGKLLKGSQKVLTARTGTEIQSRVIRKKVVLRGFSPAHLNTYIHLHFKKQE
HRELVSVQLDASPHLCGLCSTPLFCWIVFKSFRHLHTMHDSFHLPDTCITLTDIFLLLSE
VFLSRSAAPAPSLLKKSTRCASETFRAGLRSLTAFAKLALQGMERGSFIWSQEQMSECGL
TEEDLSLGFLRPVGEFDASGGAATFEVLHITLQSFLAAFALVLDEQAPAGSILKFFTECS
RKRNPFCVPFQVCISGSSKSRESNPFATNEHLQFTNLFLCGLLSKAHIGLMEHLVSPVLL
KKKRALLKSYLSTSVKSHLHGLPHYDGEEGKKVHVLPNFLWMLRCIFETGSRDIAQTTAR
GITADFIKLGYCNVFSGDCTAINFVLQHRHKVLGLDMDNNNISDYGVKQLKPSFSKMTVV
RLCVNQLSDSSIEVLAEELCKHKVVEILGLYNNHITDVGAKLVAQIIQECPKLRVVKVGK
NRITGVGGRYLASAIQRSSSIFDVGMWGNSIGDEGAEAFAEALRNHPSLTNLSLSANGIT
SRGGRSLSEALKENSVLRIFWLVQNELTDDAASHFADLVQADTGLSHLWLISNQFSVEGI
QQLAEALPHNSALKEICVKGNQLSEQEEKQFVAEKRLRFH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagagagaagaggtgaggccgtcctgcctctccctcctcacctaccacagagag
ctgctggtgtcccggctccggagcgtcccctgcatcctggacaacctgctggcctctggc
ttcgtctgtgaggaggatgtggagatcgttcagcgaactgccaccaagacggaccaggtg
cgtaaaatcttggagctagtccaatgcaaaggtgaggaggcctgtgaatacttcatttac
ataatttacaaagtatgtgatgcatacgtagacctccagccatggctgaaagacatcaac
ttcaacccaagcagtgaagtagcgctgttggacgtggtgaacacagatcccatcagcagg
ttcagtgagaagctgaggcggggcatgagccaggacaccagcttcatcatgtcgtacggc
cagcgagaggagacccgtctggaggagctgtacaccgacacgctgatggagctgctgaac
gactgcaacgagagtctgggcttcctggagagtctgcacacgctgctgggagaccacgca
gtcttcaacccccagggggagaccatctctgtgatgggggatgccggggtgggcaaatcc
atcctgctgcagaagctccagaatctctggtccaacaaagagctacagacggacgccatc
ttcttctttaagttccgctgcaggacgttcagcctcttcaaggactcggagcagatgtcc
ctcagagagcttctgttcaaacacaactgctgccccgaccacgacccggacgacgaggtg
tttgagttcatcctgcgcttccctgagaaggttctctttacgtttgacggctacgatgag
attcagatgaatgacctgatgaatgttgctgaggtgggctcaccagatgtaaaggcccac
cccctccagctgctcatcagcctgctctgtgggaaactgctcaagggttcccagaaggtt
ctgacggcccgcacaggcaccgagatccagagcagggtaatcaggaagaaggtggttctg
cgcggcttctccccggctcacctgaacacctacatccacctgcacttcaagaagcaggag
caccgagagctggtgtccgtgcagctggatgctagcccccacctctgtggcctctgctcc
accccgctcttctgctggatcgtattcaagagcttcaggcacctgcacaccatgcatgat
agtttccacctgcctgacacctgcatcacgctcacagacatcttcctcctgctgtccgag
gtgttcctcagccgctcagccgctcctgctccgtctctgctgaagaagagcactcggtgt
gcttccgagacgttcagagccgggctcaggtccctcacggcgtttgccaaactggctctt
cagggtatggagagaggaagcttcatctggagccaggagcagatgagtgagtgtgggctg
acggaggaggacctgtcgctgggcttcctgcggcctgtcggtgagttcgacgccagcggg
ggcgccgctacatttgaagtcctccacatcaccctgcagtctttcctggcagcgtttgct
ctggtgttggacgagcaggctcctgccggctccatcctcaagttcttcacagagtgcagc
aggaagaggaatccattttgtgttccttttcaagtctgtatcagtggctcctcaaagtcc
agggaaagtaatccatttgcgacaaatgaacaccttcagttcactaacctgttcctgtgc
ggcctgctgtccaaggctcacatcggcctgatggagcatctggtttctcctgtgttatta
aagaaaaaacgggccttgctcaaatcctacctttctaccagtgtgaagtcccacctccat
ggattaccccactatgatggtgaggagggcaagaaggtccatgtgctgcccaacttcctg
tggatgctgcgctgcatctttgagacggggagcagagacatcgcccagacgacggccaga
ggcatcacggcggacttcatcaagctgggctactgtaacgtgttctccggggactgcacc
gctatcaacttcgtgctgcagcaccgtcacaaggtcctgggcctcgacatggacaacaac
aacatcagtgactatggggtgaagcagctgaagccctccttcagtaagatgacagtagtg
agactgtgtgtgaatcagctgtctgacagcagcatcgaggttcttgcagaggagctgtgt
aagcacaaagtcgtggaaatcttgggcctttacaacaatcacatcacagatgttggagct
aaactggtggctcagatcatccaggaatgcccaaagctgcgagtcgtcaaggttggcaaa
aacaggatcactggtgtcggggggagatatctggccagcgcaatccagaggagctcttct
atatttgatgtggggatgtgggggaacagcatcggggatgagggagcagaagcattcgca
gaagccttgaggaaccacccgagcctcaccaacctcagtctctcagccaatggcatcacg
tctagaggtgggaggagcctgtcggaggcgctgaaagagaacagcgtgctcaggatattc
tggttggtgcagaatgagctcactgatgacgcagcgtcacactttgctgacctggtccag
gcagacacaggtctcagccacctctggttaatcagcaaccagttctctgtggaggggatc
cagcagctggccgaggccctccctcacaactcagccctcaaagagatctgtgtgaaagga
aaccagctctcggagcaggaagagaaacagtttgtggcagagaagaggctgcgcttccac
tga
DBGET
integrated database retrieval system
