Trematomus bernacchii (emerald rockcod): 117470856
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Entry
117470856 CDS
T09643
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117470856 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117470856 (uvssa)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
117470856 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
INTS1_R4
CSG2
LBD_receptor
Rieske
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
117470856
NCBI-ProteinID:
XP_033971628
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MELSQRDRLSELVEELTTSGQPQLHPERMKEVKRICRASNDCIEHVYNSVMSQLNQEHAE
VRLSAFQIAMELFSRSHHFRTLLVDNFQEFLELTVETDSEQPLPPPKEVARKLRAQAIQA
VQSWQASYGTAYKKLALGFHFLKQVKKVDFQDAEARTVSERRREEERQRKMERIYKERVE
AASTDMEESYQEIEATLTEMESCMSLLIPGFHFTESHTTNSSPPLSQPANEPSSVEEEPC
CSKDLQEERTEGKIQEKEEKSNDSEGKIGDMEEGMTEERGLEGRGVDGQEEEEGKEDEEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKSSEEEKEGPLDVNVFIRSSGLI
SHSYNLDLNLSPGLHVRETEDNEAVVTTVIDLHRLIMSKHLPAVQSWVQVFTKSCAEQRL
LQRALDLKKSLETALQKHKELHIDYKTRQRRVMKATDDDDDDDDDEDFDEVPEKEGYEPH
IPEHLRAEYGLDPVPSTSTAPAPKRAPAKAPAAPPPPSFSSIRRLKRLMDDEEQDPTCAA
ATQRRLTQTLPLPAEPSSSSSSGPGSSSGPGSSSGPGSSSGPGSSQKAADAPVVPFGLDL
YYWGQEQPNAGKIIKSASQHQFWVPIDVDEEVENKELLAESRSRYISFPGSFTPVSHHCQ
APLGGGKLCQRQDRLKCPFHGGIVPRDQEGRPCRLEDRLREEKEERKRREEHPDWKDADL
MRDIEAATGEDLGSDRLGKKRKGKKKKYPNLSDLKQSANTSRSRLEKKVLNKSAMRRVAE
VMSKADSRKHDKFSNQFNYAIH
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtctcagagggaccggctgtcggagctggtggaggagctgaccacatctgga
cagcctcagctccacccggagcggatgaaggaggtgaagaggatctgcagagcgtctaat
gactgcatcgagcacgtgtacaactctgtgatgtctcagctgaaccaggaacacgctgag
gtgcgactgtccgccttccagatcgccatggagctcttctccaggtctcaccacttcagg
acgctgctggtggacaacttccaggagttcctggagttgacagtggagacggactcggag
cagcccctcccccctcctaaggaagtagccaggaagttgagggcacaggccatccaggct
gtccaatcatggcaggcctcctatgggacagcctataagaagttagcattaggcttccac
ttcctcaaacaggtgaagaaggtggacttccaggatgctgaggcccggaccgtatcagag
aggaggagggaggaggagaggcagaggaaaatggagaggatctacaaggagagagtggag
gcagcctccacagacatggaggagtcttatcaggagatcgaggccacactcacagagatg
gagtcctgtatgagcctgctcatccccgggttccacttcacagagagccacacaaccaat
agcagccctccactctcccaaccagccaatgaaccgtcatcagtggaggaagagccctgc
tgcagcaaagacctgcaggaggagcggacggaagggaagatacaggagaaggaggagaag
agcaatgactcagagggaaagataggagacatggaggaagggatgacagaggagaggggt
ttagaggggaggggtgtggatgggcaggaggaggaggagggaaaggaagatgaggaggag
gaggaggaggaggaggaagaggaggaggaggaagaggaagaggaagaggaagaggaagag
gaagaggaggaggaggaggaggaggaagaagaggaggaggaggaggaagagaaaagtagt
gaggaagagaaggaggggcctcttgatgtaaatgtgttcatccggagctctgggctgata
tctcactcctacaacctggacctgaacctcagtcctggtcttcatgtcagggagacggag
gataatgaggcagtggttaccacggtgatagacctccatcggctgataatgagcaaacac
ctaccagctgtgcagagctgggttcaggtgttcactaagtcctgtgctgagcagcgtctc
ctgcagagggctctggacctgaagaagagtttagaaactgcgctgcagaaacacaaagag
ctgcacatcgactacaagaccagacagcgtagagtgatgaaggctacagatgatgatgac
gatgatgatgacgatgaagacttcgatgaggttccagagaaggagggatatgagccacac
attccagagcacctacgagctgagtatggtttggaccctgttccctccacctctacagct
ccagccccaaagagagctccagctaaagcccccgcagccccccctcccccctccttctcc
tccatcaggcggctgaagcgtctcatggatgatgaggagcaggatcccacctgtgcagcg
gccacccagcgccgcctcacccagaccctccccctgcctgcagagcccagcagcagcagc
tcctcggggcccggctcctcctcggggcccggctcctcctcggggcccggctcctcctcg
gggcccggctcctctcagaaggctgctgatgctcctgtggttccgtttggtctggacctc
tactactggggccaggagcagcccaacgctggcaagatcatcaagtcggcctcccagcat
cagttctgggttcccatcgatgtggacgaggaggtggagaacaaggagctgctggcagag
agccgcagcagatacatctccttccccgggagcttcaccccggtcagccatcactgccaa
gctcctctggggggcgggaagctgtgccagagacaggaccgcctcaagtgtcctttccat
ggaggcatcgtccctcgggaccaggaagggagaccctgcagactggaggaccggctgagg
gaggagaaggaggagaggaagaggagggaggaacacccggactggaaggatgcagatctg
atgcgggacatcgaggcggccacaggagaagacctgggctctgacaggctggggaagaaa
aggaaagggaagaagaagaagtacccgaacctcagcgacctgaagcagagcgccaacacg
tcccgctccaggctggagaagaaagtgcttaacaagagcgccatgcgcagagtagcggag
gtgatgagtaaagctgacagcaggaaacatgacaagttctccaaccagttcaactacgcc
atccactga
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