KEGG   Trematomus bernacchii (emerald rockcod): 117471010
Entry
117471010         CDS       T09643                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117471010 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tben03041]
    117471010 (rbm22)
Spliceosome [BR:tben03041]
 Complex B
  Other components
   Prp19-related factors
    117471010 (rbm22)
 Complex C
    117471010 (rbm22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded Nup35_RRM_2 zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_12 zf-CCCH_PARP12 zf-CCCH_10
Other DBs
NCBI-GeneID: 117471010
NCBI-ProteinID: XP_033971682
LinkDB
Position
Unknown
AA seq 427 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEFGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGVKEGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPSSSPAV
MNIALPPPPGINPPPPGFGPPMFHPMGHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGARQGE
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcgacgtctctaggatccaacacctacaatagacagaactgggaagacgcggatttt
ccaattctgtgtcaaacatgtttaggagaaaacccatatatccgcatgaccaaggagaag
tatgggaaagagtgcaagatttgtgctcgtccattcactgtgttccgatggtgcccgggg
acacggatgcgttttaagaagactgaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcaaacatgtctgctggacctcgagtttggtttgcctattcaggtcagagacaccggg
ctgtcagttaaagacgaggttcctaagtcggatgttaacaaagagtactacacacagaac
atggagagagagatagccaattctgatggcacacggccagtgggccagctgggtaaagcg
cccagctctagtgacatgttgctgaaactggccaggaccacgccatactacaagaggaac
agaccacacatctgctccttctgggtgaaaggagagtgtaagagaggggaggaatgtccc
tacagacacgagaagcccaccgatcctgatgatcctctggccgaccagaacatcaaggac
cgttactacggcattaatgaccctgtggctgacaagctgctgaaacgggcctcaactatg
ccgcgtcttgacccaccagacgacaagtccatctccaccctctacatcggaggattggga
gacactgtcactgatggagatctcaagagtcacttctaccagtttggagagatccgcacc
atcaccatagtccagaggcagcagtgtgccttcatccagtttgccactcggcagtcagct
gaaatggctgctgagaagtccttcaacaaactcatcattaatggacggaggctcactgtc
aagtggggaaggtctcaggcagcaagagggaaggagggtgtcaaagaaggtgtcagtgag
atgggcaccagacttgatcctgtacctggactgcctggagctcttcctccacctccagct
ttagacgaagaagctcctgctaactacttcaacctggaccctagcagctctcctgcggtc
atgaacatcgctctgcccccccctccaggcatcaacccgcctcctccaggttttggccct
ccaatgtttcaccccatgggtcacatggctccacctatgccccctccaatgagcatgaga
cctcctggtcaaatccactacccctcccaggatcctcagcgcatgggagcccacgctgca
catggcgcacgtcaaggcgaatag

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