Trematomus bernacchii (emerald rockcod): 117471022
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Entry
117471022 CDS
T09643
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117471022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117471022
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117471022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
117471022
NCBI-ProteinID:
XP_033971689
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MEGDGSQATSGSPTEPQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKR
SRGFGFITFADAASVDKVLALTHHELDSKMIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVIEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMCPPGTRGRARGLPYTVDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPAAAYGPVAAAAVAAARGSGRGAPGRVGGYMAYGQNTGAGFPDYGLYSAAGSDMRG
GGSYSLADYSSLGAQAAQILPSDHASSSCNSPNSIQHHLHSPDPFKSPGSNQTRPGAFHG
ANSPGPVADLYGGTSQDSGVGNYISATSPQPGSGFSHSIAVMPPSTNHYSLHAVSLSGGG
TR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggacggcagccaagccacgtctggaagcccgactgaaccgcagcacgacccg
gggaaaatgtttatcggtggcctcagctggcaaacttcaccagatagccttagagattat
ttttgtaaatttggggaaatccgagaatgtatggtgatgagagacccaacgacaaaacgt
tccaggggctttggcttcatcacttttgcagatgctgccagcgtagataaagtcttggca
ctgacgcaccacgagttagattctaaaatgatcgatcctaaagttgcctttcctagacgt
gctcagcccaagatggtcacgagaacaaagaaaatatttgttggaggattatcagccaac
acagtaattgaagacgtgaagcaatattttgaacagtttggcaaggtagaggatgccatg
ctaatgtttgacaaaaccaccaaccgacatagaggttttggctttgttacatttgaaatt
gaggatgtggtggagaaagtctgcgagatccattttcatgaaatcaataataaaatggta
gaatgcaaaaaggcccagcctaaagaagtgatgtgtcccccggggacacgaggtcgggcg
aggggccttccgtacactgtggatgccttcatgctgggcatgggcatgctgagttatcct
aacattgtagcaacatacggcagaggttacactggatttgccccaagctacagctaccag
ttcccaggcttcccagcagcagcgtacggtccggtggcagcggcagcagtagcggcggcg
cgtggctcaggtaggggggcccctggaagagtcggcggctacatggcatacgggcagaac
acaggggcaggcttccctgactatgggttgtattctgcggccggcagtgacatgcgggga
gggggctcctactccctggctgactacagctccctgggggcccaggcggctcagatcctg
cccagtgatcacgccagctcttcctgcaactcccccaactccatccagcaccacctgcac
agcccggaccccttcaagagcccaggaagcaaccaaaccaggcctggagccttccatggg
gccaacagtcctggccccgtagctgacctctatggaggcaccagtcaggactctggtgtg
ggaaactacatcagcgccaccagccctcagccgggctccggcttcagccacagcattgct
gtgatgccacccagcactaaccactacagcctccacgcagtgagcctgagcgggggtggg
accagatga
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