KEGG   Trematomus bernacchii (emerald rockcod): 117471104
Entry
117471104         CDS       T09643                                 
Symbol
hnrnpul1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tben03041]
    117471104 (hnrnpul1)
   03400 DNA repair and recombination proteins [BR:tben03400]
    117471104 (hnrnpul1)
Spliceosome [BR:tben03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    117471104 (hnrnpul1)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     117471104 (hnrnpul1)
SSDB
Motif
Pfam: AAA_33 SPRY SAP KTI12 Roc
Other DBs
NCBI-GeneID: 117471104
NCBI-ProteinID: XP_033971794
LinkDB
Position
Unknown
AA seq 980 aa
MSFDVKKLKVNELKKELQRRGLDSKGLKADLVERLKAALQASEPGEQEENFGQAYQDNED
GEDVPEQQDEEGAEDSGDVDDGGDDDGDDDDVEGEVDSEGAADVVADAKGAADVVADAKG
AADVVADAKEDDDVVADAKGAADVVADAKEDGDVVADAEEDGDVVADAEEDGDVVTDAEE
DGDVVADAKGDGEVVADAEGDSDGDVEGEAGAPQEEDEGRDSGGYYEDEEAEGEPFESQP
TSDSCHSMPDFTADVELHKSDAVPEEEAEPEEKVENKPEVKVEVKMEDEPEAAGNTEQES
QRTEHQDGAVQGEQIKVESDKAGNNSRKRPHEESRGYNYYEHREEKRSRTPQPPAEDEEE
NIDDTLVTIDTYNCDLHFKVSRDRYSGYPLTIEGFAYLWAGARASHGITKGRVCYEMKIN
EEIPVKHLPSSEPDPHVVRIGWSLNHCSTQLGEEPFSFGYGGTGKKSADCKFEDFGEKFG
ENDVIGCYIDFDSADEVEMSYSKNGVSLGVAFRTTKEALEGRALFPHVLVKNCAVEFNFG
QKAEPYFPPPSGYTYIHELSLEDKIRGTKGPASKSECEILMMVGLPACGKTTWATKFAQT
NPEKKYNILGTNAIMDKMKVMGLRRQKNYSGRWDVLIQQATQCLNRLIEIAARKRRNYIL
DQTNVYGSARRRKMRPFEGFQRKAIVICPTDEDLKERTLKQTNEQGKDVPDHAVLEMKAN
FTVPEACDFLEDVTFAELQREEAETLLKQYNEEGRKAGPPPDKRFDNRPGGFRGRGAAGG
GSFQRYDNREASRGGYQNRSGDGGSGYRGEPSGNTRGSYNQNRWGNRDSGSDARSSYNRS
QPATGSYNRPAPYNKGAYSQGYSQSYNQGYNQGSYNQSYYGNYSQYPGYSQSYSQTPTTA
QTYNHHQQPPQAAPAQQQQQQPPPAQQPQQQQQTQSYNQQYQQYAQQWQQYYQNQNQWNQ
YYSQYGGYPGQGSQGSSGSQ
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgagtttcgacgtgaagaaactgaaagtcaacgaactgaaaaaggagctccagcgccgc
ggcctggacagcaaaggcctgaaggctgatctggtggagaggctaaaagccgctcttcag
gcctccgagccgggggagcaggaagagaacttcggccaggcgtaccaggacaacgaagat
ggagaggatgtcccagagcaacaagatgaagagggagctgaggactctggtgatgtcgac
gatggcggggatgatgatggggatgatgatgatgttgaaggtgaagtcgacagtgaaggg
gccgccgatgttgtagcagacgccaaaggggccgccgatgttgtagcagacgccaaaggg
gccgccgatgttgtagcagacgccaaagaggatgacgatgttgtagcagacgccaaaggg
gccgctgatgttgtagcagacgccaaagaggatggcgatgttgtagcagacgccgaagag
gatggcgatgttgtagcagacgccgaagaggatggcgatgttgtaacagacgccgaagag
gatggcgatgttgtagcagacgccaaaggggatggcgaggttgtcgcagacgccgaagga
gacagtgatggggatgttgaaggtgaagctggggccccccaagaagaagatgagggtcgg
gattcaggtggttactacgaagatgaagaggcagaaggcgagccttttgaaagccagccg
acttcagactcctgtcacagcatgcctgacttcacagcagatgtcgagttacacaaatcc
gacgcggtgcctgaggaagaagccgagccagaggagaaagtggagaacaaaccagaagtc
aaagtggaagtgaagatggaagatgaaccagaggctgctgggaacacagagcaggaaagt
cagaggacagaacatcaggacggagccgttcagggagagcaaatcaaagtggaatctgat
aaagccggaaacaacagccgcaagagaccgcacgaggagagccggggctacaactactac
gagcatcgcgaggaaaagagatctcgcacaccccagccccctgctgaagacgaagaggag
aatatagacgacactctggttacaattgatacgtacaactgtgacctgcatttcaaagtg
tccagagaccgctacagtggttaccctctgaccatcgaaggctttgcttacctgtgggcc
ggagcccgagcctcacacggcatcaccaagggccgcgtgtgttatgagatgaagatcaat
gaggagattcctgtaaagcacctgcccagcagcgagccggacccccacgtggtcagaatc
ggatggtccctcaaccactgcagcactcagctcggtgaggagcccttttcattcggatac
ggaggaacagggaagaagtctgcagactgtaagtttgaagactttggcgagaagtttggg
gaaaacgacgtcatcggctgttacattgactttgacagtgctgatgaggtggagatgagc
tattccaagaacggagtctccctaggagtggctttccggactacaaaggaggcgctggaa
ggtcgcgccctgtttcctcacgtcctcgtgaagaactgtgctgtggagttcaacttcgga
cagaaggccgagccgtacttccccccgccgagcggatacacctacatccacgagctcagc
ctggaggataagatcaggggcaccaaggggcccgccagcaagtctgagtgcgagatcttg
atgatggtcggcctgcccgcctgcggaaagaccacctgggccacaaagtttgcacagact
aaccctgagaagaagtacaacatcctgggcacaaatgccatcatggacaagatgaaggtg
atgggtctgcgccggcagaagaactactcgggccgctgggacgttctgatccagcaggcc
acgcagtgcctgaacaggctgatcgagatcgccgcccgcaagagacgcaactacatcctg
gatcagacaaatgtatatggatcagcaaggagacgaaaaatgcgtccttttgaaggtttt
caacgcaaggctattgtaatttgtcccacggacgaggatttaaaagaacgaacattaaag
caaaccaatgagcaggggaaggatgtgcccgatcatgctgttttagaaatgaaagccaac
ttcactgtccccgaggcttgcgacttcctggaggatgtgacgttcgctgagttgcagcgt
gaggaggcagaaactctgctgaagcagtacaacgaggagggccgcaaggccggcccgccc
cctgacaaacgcttcgacaacaggccgggcgggttccggggccgcggcgctgccgggggc
gggagcttccagcggtacgacaaccgcgaagcgtcccgcggtggctaccagaaccgcagc
ggggacggaggcagcggatacagaggtgagccgagcggcaacactcgtggcagctataac
cagaaccgttggggaaaccgcgactccggctctgatgcacgtagcagctacaaccgcagc
cagcctgcaacaggaagctacaaccgccccgctccgtacaacaagggagcatacagccag
ggctacagccagagctacaatcaagggtacaatcagggcagctacaaccagagttactat
ggcaactacagtcagtacccaggatacagccagagctacagccagacacccaccactgca
cagacatacaatcaccaccagcagccaccacaggcggcgccggcacagcagcagcagcag
cagccgccgccagcgcagcagccccagcagcagcaacagacgcagagctacaaccagcag
taccagcagtatgctcagcagtggcagcagtattaccagaaccagaaccagtggaaccag
tattacagccagtacggaggctaccctggacagggcagccagggctcctccggctcccag
tag

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