Trematomus bernacchii (emerald rockcod): 117471104
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Entry
117471104 CDS
T09643
Symbol
hnrnpul1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117471104 (hnrnpul1)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117471104 (hnrnpul1)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
117471104 (hnrnpul1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117471104 (hnrnpul1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
KTI12
Roc
Motif
Other DBs
NCBI-GeneID:
117471104
NCBI-ProteinID:
XP_033971794
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MSFDVKKLKVNELKKELQRRGLDSKGLKADLVERLKAALQASEPGEQEENFGQAYQDNED
GEDVPEQQDEEGAEDSGDVDDGGDDDGDDDDVEGEVDSEGAADVVADAKGAADVVADAKG
AADVVADAKEDDDVVADAKGAADVVADAKEDGDVVADAEEDGDVVADAEEDGDVVTDAEE
DGDVVADAKGDGEVVADAEGDSDGDVEGEAGAPQEEDEGRDSGGYYEDEEAEGEPFESQP
TSDSCHSMPDFTADVELHKSDAVPEEEAEPEEKVENKPEVKVEVKMEDEPEAAGNTEQES
QRTEHQDGAVQGEQIKVESDKAGNNSRKRPHEESRGYNYYEHREEKRSRTPQPPAEDEEE
NIDDTLVTIDTYNCDLHFKVSRDRYSGYPLTIEGFAYLWAGARASHGITKGRVCYEMKIN
EEIPVKHLPSSEPDPHVVRIGWSLNHCSTQLGEEPFSFGYGGTGKKSADCKFEDFGEKFG
ENDVIGCYIDFDSADEVEMSYSKNGVSLGVAFRTTKEALEGRALFPHVLVKNCAVEFNFG
QKAEPYFPPPSGYTYIHELSLEDKIRGTKGPASKSECEILMMVGLPACGKTTWATKFAQT
NPEKKYNILGTNAIMDKMKVMGLRRQKNYSGRWDVLIQQATQCLNRLIEIAARKRRNYIL
DQTNVYGSARRRKMRPFEGFQRKAIVICPTDEDLKERTLKQTNEQGKDVPDHAVLEMKAN
FTVPEACDFLEDVTFAELQREEAETLLKQYNEEGRKAGPPPDKRFDNRPGGFRGRGAAGG
GSFQRYDNREASRGGYQNRSGDGGSGYRGEPSGNTRGSYNQNRWGNRDSGSDARSSYNRS
QPATGSYNRPAPYNKGAYSQGYSQSYNQGYNQGSYNQSYYGNYSQYPGYSQSYSQTPTTA
QTYNHHQQPPQAAPAQQQQQQPPPAQQPQQQQQTQSYNQQYQQYAQQWQQYYQNQNQWNQ
YYSQYGGYPGQGSQGSSGSQ
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgacgtgaagaaactgaaagtcaacgaactgaaaaaggagctccagcgccgc
ggcctggacagcaaaggcctgaaggctgatctggtggagaggctaaaagccgctcttcag
gcctccgagccgggggagcaggaagagaacttcggccaggcgtaccaggacaacgaagat
ggagaggatgtcccagagcaacaagatgaagagggagctgaggactctggtgatgtcgac
gatggcggggatgatgatggggatgatgatgatgttgaaggtgaagtcgacagtgaaggg
gccgccgatgttgtagcagacgccaaaggggccgccgatgttgtagcagacgccaaaggg
gccgccgatgttgtagcagacgccaaagaggatgacgatgttgtagcagacgccaaaggg
gccgctgatgttgtagcagacgccaaagaggatggcgatgttgtagcagacgccgaagag
gatggcgatgttgtagcagacgccgaagaggatggcgatgttgtaacagacgccgaagag
gatggcgatgttgtagcagacgccaaaggggatggcgaggttgtcgcagacgccgaagga
gacagtgatggggatgttgaaggtgaagctggggccccccaagaagaagatgagggtcgg
gattcaggtggttactacgaagatgaagaggcagaaggcgagccttttgaaagccagccg
acttcagactcctgtcacagcatgcctgacttcacagcagatgtcgagttacacaaatcc
gacgcggtgcctgaggaagaagccgagccagaggagaaagtggagaacaaaccagaagtc
aaagtggaagtgaagatggaagatgaaccagaggctgctgggaacacagagcaggaaagt
cagaggacagaacatcaggacggagccgttcagggagagcaaatcaaagtggaatctgat
aaagccggaaacaacagccgcaagagaccgcacgaggagagccggggctacaactactac
gagcatcgcgaggaaaagagatctcgcacaccccagccccctgctgaagacgaagaggag
aatatagacgacactctggttacaattgatacgtacaactgtgacctgcatttcaaagtg
tccagagaccgctacagtggttaccctctgaccatcgaaggctttgcttacctgtgggcc
ggagcccgagcctcacacggcatcaccaagggccgcgtgtgttatgagatgaagatcaat
gaggagattcctgtaaagcacctgcccagcagcgagccggacccccacgtggtcagaatc
ggatggtccctcaaccactgcagcactcagctcggtgaggagcccttttcattcggatac
ggaggaacagggaagaagtctgcagactgtaagtttgaagactttggcgagaagtttggg
gaaaacgacgtcatcggctgttacattgactttgacagtgctgatgaggtggagatgagc
tattccaagaacggagtctccctaggagtggctttccggactacaaaggaggcgctggaa
ggtcgcgccctgtttcctcacgtcctcgtgaagaactgtgctgtggagttcaacttcgga
cagaaggccgagccgtacttccccccgccgagcggatacacctacatccacgagctcagc
ctggaggataagatcaggggcaccaaggggcccgccagcaagtctgagtgcgagatcttg
atgatggtcggcctgcccgcctgcggaaagaccacctgggccacaaagtttgcacagact
aaccctgagaagaagtacaacatcctgggcacaaatgccatcatggacaagatgaaggtg
atgggtctgcgccggcagaagaactactcgggccgctgggacgttctgatccagcaggcc
acgcagtgcctgaacaggctgatcgagatcgccgcccgcaagagacgcaactacatcctg
gatcagacaaatgtatatggatcagcaaggagacgaaaaatgcgtccttttgaaggtttt
caacgcaaggctattgtaatttgtcccacggacgaggatttaaaagaacgaacattaaag
caaaccaatgagcaggggaaggatgtgcccgatcatgctgttttagaaatgaaagccaac
ttcactgtccccgaggcttgcgacttcctggaggatgtgacgttcgctgagttgcagcgt
gaggaggcagaaactctgctgaagcagtacaacgaggagggccgcaaggccggcccgccc
cctgacaaacgcttcgacaacaggccgggcgggttccggggccgcggcgctgccgggggc
gggagcttccagcggtacgacaaccgcgaagcgtcccgcggtggctaccagaaccgcagc
ggggacggaggcagcggatacagaggtgagccgagcggcaacactcgtggcagctataac
cagaaccgttggggaaaccgcgactccggctctgatgcacgtagcagctacaaccgcagc
cagcctgcaacaggaagctacaaccgccccgctccgtacaacaagggagcatacagccag
ggctacagccagagctacaatcaagggtacaatcagggcagctacaaccagagttactat
ggcaactacagtcagtacccaggatacagccagagctacagccagacacccaccactgca
cagacatacaatcaccaccagcagccaccacaggcggcgccggcacagcagcagcagcag
cagccgccgccagcgcagcagccccagcagcagcaacagacgcagagctacaaccagcag
taccagcagtatgctcagcagtggcagcagtattaccagaaccagaaccagtggaaccag
tattacagccagtacggaggctaccctggacagggcagccagggctcctccggctcccag
tag
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integrated database retrieval system