Trematomus bernacchii (emerald rockcod): 117471106
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Entry
117471106 CDS
T09643
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04517
IgSF CAM signaling
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117471106
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117471106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117471106
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117471106
Intermediate filaments
Intermediate filament-binding proteins
117471106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
Motif
Other DBs
NCBI-GeneID:
117471106
NCBI-ProteinID:
XP_033971798
LinkDB
All DBs
Position
Unknown
AA seq
2713 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPSSSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EHNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDSCIEAE
NIVNRYDALASDLLDWIEKTIAVLSNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISEINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELGAEMEAEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLAMQKTFQDMVYMI
DWMEDTQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELRQLAAKRREELEESRQLWAFFQELEESEAWIREKSSILS
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQERIMEV
KSEWKSLEDQAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAVDKHRMHVLALRKHMVALPLRYRDQEEVLVRMGEVEQLYTEVVEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAINATQYMGSDLGGVMALQRRLSTMEGALSVLEPKLLHLQEEAEHM
ANAHPIRAMEVLVPFDGISVEWEELKRTLQGCEDSLTVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNNLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESDEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSDRIKERIDTLASRGNQNRE
QAQQWLEKMNDQWELQRFLQDCLELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSQVVRMKLEEIRECWQELESTTQAKARQLFESNKA
DLLVQSYESMDQKLGQLEVQLAYVDHGQDLTTVNKQLKKLHTMESQMEEWYKEVGQLQAQ
VASIPQQTKIKETVAERQAVVEARMVRLIEPLKERRRILLASKEVHQVGRDLDDEILWVQ
ERLPMAMSQEHGSSLQAVQQLMKKNQTLQRELQGHRSRIDDVLERAGIIASIRSPEADSA
RAGHEQLAGLWALLWHETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDYEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVTVLQEKFTDF
ASETGNVGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRARQGSSANTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIAFREHEVMQCWKELLTSCEECRVQITTETDKLRFFSMVR
DQITWMESIICQIGTGEKPKDVSSVEVLMNYHQSLKSEVEARSRSTLECIEMGKTLLAAR
NPAAEEIKEKLDKVITKQYELSEKWDNHWDALQQLLEVHQFAQEAVVAEAWLTAQEPLIS
SNELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRITTVEKLRAEQSQLPPTPLLGRK
VFLDPQDASANVSTLPRLPLSPVMRQTIYEQNEANSPPSPSPATPTPSPSSVARRLGSTV
ANYTPVMNGSSYRQSLEARQGGVVGLAAGLGQPTPFSIASVATAAMLVSANQARESPSPA
REQATKGMSYLQPSQAARSPEVKSSPYLRQPKIKHLDDAVTPLLVASRLERARERERGRE
REREIMMGEIGTEKAEVAVMAEVVLTEPGRERLHSEPTRGPRGSRTDPLGHAEPQVHTHG
QHRIERQLSSEQLIQARRDELPQEVWREQAERRDRKTLERQTSSEQEGPVASGGHEGRRR
ERDRHRLDRQESSEHDTGREQSDRRSGGGEKRSTMAEIVEQIQEREAAQARGEVARLPNG
VPEKITKQSLERPRARDRPKPRRRPRPKEAGETTRRSRSAPAQSSPSVPLQPTHTAHHEG
FLFRKLDIETLKKSTNSRSWVNLYCVLKEGEMGFYKDAKNMATSYNNEPLLNLSHCHCDV
TNGYKKKKNVFTLKTKDGSEFLFHAKDEDDLKVWVGNITASITEHEEIAKWGQPQPTTSS
TDEGTRRDGSKADNRSERGGERSDRGDRIEPADIEKDKERDKEKEKERGERSERSERGGK
SEAKRSEKSGKKK
NT seq
8142 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgccgaagcccagcgccagctcaacaacaac
aaccgcccaagcagctcgggattctgggagacggagtgcaccagctccaagctgtttgag
tgctcccgcatcaaggccctggcagatgaacgagatgcggtacagaagaaaactttcacc
aagtgggttaactcccatctggccagagtgtcctgtcgcatagctgacctctacaacgac
ctgcgggatggatacatgctcaccaggctgctggaggtcctcagtggagagctgctgccg
aggcctacgcggggtcgaatgcggatccactgcctggagaacgttgacaaagccctgcag
ttccttaaagaacagagggtgcacctggagaatgtgggctcccatgacattgtggatgga
aaccaccgcctcaccctgggccttatgtggaccatcatcctacgcttccagatccaggtg
atcaaaatagagacggaggacaacagagaaacccgctctgccaaggacgccctgctgctc
tggtgccagatgaagaccgcagggtaccctgaggtcaacatccagaacttcaccacctgc
tggagagacggcctcgccttcaacgctctcatacacagacacagacctgatctgatagag
ttccacaagctgacgcggtccaatgcaacccacaacctccagcaagctttcaacatcgct
gagcataacctgggcctcaccaaactcctggatcctgaggatgtgaacacagagaaccca
gatgaaaagtccatcatcacctatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtgctagacagttgtattgaagcagag
aacatcgtgaaccgctacgatgccctggcctcagacctgctggactggatagagaagacc
atcgcggtcctcagcaaccagaagttcgccaactctctgaccggagtccagcagcagctg
caggccttcaccacctactgcaccatcgagaagcccatcaagtttcaggagaaggggaat
ctagaagttcttctgttcaccatccagagcaagctccgagccaacaaccagaaaccctat
gtgcctcatgacgggaagctcatctcagagatcaacaaggcctgggagaggctggagaag
gccgaacatgagaggggcgtggctctgcgtaaggagctgattcgtcaggagaagctggag
ctgctggctcagtgcttcgaccacaaaaccaccatgagacaagcctggctcaacgagaac
cagagactcgtgtcgcaggacaattttggctatgacctgccagcagtggaggcggcgatg
aagaaacacgaggccatcgaggcggacatagcctcgtatgaagagcggattggtgtggtg
gtggagctcggagcagagatggaggcagaaggatactacgacatccggcgtatcctggca
cggaaggagaacatcctgggacagtggagcctgctgaaggagctggtggctgggaggagg
acccggctggagaagaacctagccatgcagaagacctttcaggacatggtctacatgatc
gactggatggaggacacacaggtccagctgctgtccaaggactttgggaagcatcttctg
gaggtggacgacctgctgcagaaacacagcctgcaggaggccgacatcacagtgcaggcg
gagagggtggagactctgaacaccgctgcactcaaattcaccaccatagagggttaccaa
ccatgtgacccacaggtgatctgtaaccgtgtcaaccatgtgtcttcctgtctggaggag
ctgagacagctggcagctaaaagacgtgaagagctggaggagtccagacagctgtgggcc
ttctttcaggagctggaggagtcggaggcctggatcagggagaagagctccatcctgagt
gctcagggctacgggaaggacctgagcagtgtgctgaagctgctgcagaaacacaagacg
ctggctggagagctgctggctcaccgctcgctgctgcagaacaccatgaagcgaggaaag
cagatcctgagtgagaagagcttcggcacggcggggatccaggagcgcatcatggaggtg
aagagcgagtggaagagtctggaggaccaggccgcgcagcgtctgggccacctgcaggag
gcgctcaactttttccagttctccacggagacggacgacctggtggcgtggctgcaggac
gcttaccgcctggtgtccagcgaagactttggacacgacgagtactccacccagtcgctt
ctgaagaaacacagaggggtcagcgaggccgtggacaaacaccgcatgcacgtgctggca
ctgcgcaaacacatggtggcgctgcctctgcgctaccgcgatcaggaggaggtgctggtg
cgcatgggggaggtggagcagctgtacacggaggtggtggaggtggcggtgctcagacag
cagtggctccacgacgccctcgccgtctaccgcatgttcagcgaggtcaatgcctgcgag
ctgtggatcgatgagaaggagcagtggttggacaagatggagatcccagaaaggctggag
gacgtggagatggtggctcacaggtttgaaagcctggaccaagagatgaacagcctgatg
ggaaggattctggacgttaaccagatcgttcagcagctcctggatggaggtcatccgtcc
tccacagaggtcagaggatgtcaggaccaccttaactccaggtggaacagcattgtggag
ctggtggaacagaagaaggatcagctggactccatgctccgcctgcagaactacctgctg
gagtgtgccgagatcaagtcccagatccaggacaagaggaaagccatcaacgccacccag
tacatgggcagtgacctggggggggtcatggctctgcagagacgactctccaccatggag
ggagctctgtctgtcctggagcccaaactactgcatctgcaggaagaggcggagcacatg
gccaacgcccatcccatccgggccatggaggttctggtgccgtttgatggcatcagtgtg
gagtgggaggagcttaaacgcaccctgcagggctgcgaggactcactgaccgtggccagc
aggctgcagagcttcatacaggacctggactcgttcctcacctggttggttcagacgcag
acagccgccgcctcagaccagctgcccaacaacctggaggaggccgagaaactcatcaac
aaacacgctgcacttaaggaggaaatcggaagatatgaagaggactacgagcggctgcag
gccatgaacgagctgctggagtccgatgaggcccccctcccccaggccgccctgcagcag
tggctccagaagctcgatgtgggctggaacaaactgctggagatgtgggagagcaggagg
gaagttctggtgcaggctcacattttccatctgttcctgcgagatgtcaaacaggccgag
tccttcctcaacaaccaggagtcggccctggctcacgtggagctgcccaccaccgtggaa
acagtggaagcggccataaagaaacacaaggacttcaccaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaagccggggagagtctgatcagccagaacaacatctac
tctgatcgtattaaggagcgcatcgacaccctcgccagcaggggaaaccagaacagagag
caggcccagcagtggctggagaagatgaacgaccagtgggagctgcagaggtttctgcag
gactgtctggagctgggggactgggtgtgtgagaagatgctgatggcgagggacagcagc
cgagacgagacccagaagcttcacaagaaatggcttaagcaccaagccttcatggccgag
ctggcccagaataaggaatggctggacaaaattgaaaaggagggccagcagctaatccag
gagaagccggagctcagccaggtggtgcggatgaagctggaggagatcagggagtgctgg
caggagctggagagcaccacccaggccaaagcacggcagctctttgagtccaacaaggcc
gacctgctggttcagagctacgagagcatggaccagaagctgggccagctggaggtccag
ctagcctacgtggaccatggacaggacctcaccactgtcaacaagcagctcaagaaacta
cacacgatggagagccagatggaggagtggtataaggaggtggggcagctccaggcgcag
gtggcctccatcccacagcagacaaagatcaaggagacggttgcagagcgacaagcagtg
gtggaggccaggatggtgcgactgatcgagccgctgaaggagaggcggcggatcctgctg
gcctccaaagaagttcaccaagtgggacgagacctggacgatgagatcttgtgggtccag
gagcgcctcccgatggccatgtctcaggagcacggctcctctctgcaggcggtgcagcag
ctcatgaagaagaaccagactcttcagagggagctgcagggccacaggagcaggatcgat
gatgtcctggagagggcggggatcatcgcctcaatccgcagccccgaggcggacagcgcc
cgggcgggccacgagcagctggccgggctgtgggctctgctgtggcacgagacggagagg
aggcagctggtgctggacgccatgtaccaggcccagcagtactacttcgacacggccgag
gtggaggcctggctgagcgagcaggagttgcacatgatgaacgaggagaaggggaaggac
gagccgagcacgctgcagctgctgaagaaacacctggtcctggagcagaccatcgaggac
tacgctgagaccatcggcctgctctcacagcagtgtcgacagctgctggagatgggccat
ccagactacgagcagatcagcaagcgtcagtcgcagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctctaccagctc
aacagggaggtggacgagctggagcagtggattgctcagagggaggtggtggccagctcg
cctgaactgggtcaagactacgagcatgtcacggtcctgcaggagaagttcacagacttt
gcgtcagagacgggcaacgtgggacaggagagagtgaccgccgtcaaccagatggtggac
gagctgatcgactacggccacgcggaggccgccaccatcgctgagtggaaggacggggtg
aacgaggcctgggccgatctgctggagctgatggagacccgggcgcagatgctcgccgcc
tcacaccagctgcacaagttcttctctgactgcagagaggttttggcccagatcgaggac
aaacatcggaggcttcctgaagttcgcgctcggcagggcagctctgccaacaccagcacg
ctgcagagactgctgcacagctttgagcaggacatacagctgctggtcacacaggtgcgt
cagctgcaggagagcgcggctcagctgaggacggtgtacgccggggagaaggccgaagcc
atcgccttccgcgagcacgaagtgatgcagtgctggaaggagctgcttacgtcctgcgag
gagtgccgagtacagattaccaccgagaccgacaagctgaggttcttcagcatggtccga
gatcagatcacttggatggaatccatcatctgtcagatagggacaggagaaaagcctaag
gacgtgtcctcagtggaggtgctgatgaactatcaccagagtctgaagagtgaggtggag
gctcggagccgcagcactctggagtgtatcgagatggggaaaactctgctggctgctaga
aacccggcagctgaggagatcaaggagaagctagacaaggtaatcaccaagcaatacgag
ctgtctgagaagtgggacaaccactgggatgccctacagcaattgttggaggttcaccag
tttgcgcaggaagctgtggtggcggaggcgtggctgaccgctcaggagccgctcatcagc
agcaacgagctgggggcgagcgtagacgaggtggagcagctgattcgtcggcatgaagcc
ttccgcaaagctgctgccacctgggaggagcgattcagctcactgcgacgaatcaccacg
gtggaaaagttgagagcagagcagagtcagctgcccccgacccctctgctgggtcgtaaa
gtcttcctggacccccaagatgcctcagcaaatgtatccaccctcccccgcctcccgctc
tcccccgtcatgagacagaccatctatgagcagaacgaagccaattctcctccctcaccc
tcacccgccacacctacaccctccccctcatctgtggcccgtcggctggggtccaccgtg
gctaactacacccccgtgatgaacggctccagctaccgccaaagcctggaggcgcggcag
ggcggcgtggtgggtttggctgcaggactaggccagcccacccctttctccatcgcctca
gttgccacggcagccatgcttgtctcagccaatcaggcgagagagagccccagcccggcg
agagagcaagcaacaaaggggatgagttacctccagccatcacaggcggcgagatctcca
gaggtgaagtcatccccgtatctacggcaacccaaaatcaaacacctggatgacgcagtg
acgccgctgctcgtggccagccggctggagagggcgagggagcgggaaagggggagggag
agggagagggagataatgatgggagagatagggacggagaaagcggaggtggctgtgatg
gctgaggtggtgcttacggagccgggccgggagcgcctgcacagtgagcccaccagaggg
ccccgggggtccagaactgatccgctgggccacgctgagcctcaggtccacacacacggt
cagcacaggatagagcggcagctgtccagcgagcagctgatccaggcccgcagggacgag
ctgcctcaggaggtgtggagggaacaggccgagaggcgggacaggaagacgcttgagagg
caaacgtccagtgagcaggagggccccgtggcctccgggggccatgaaggccggcggaga
gagagggaccgacaccggctggacagacaagaatccagcgagcatgacaccggcagagag
caatctgaccgacgctcaggaggaggagaaaagagatccaccatggcagagattgtagag
cagatacaggagagagaagcagcacaggcccgtggagaggtggcccgcctgcctaatggt
gtcccagagaaaataaccaaacagtcactggagcgacctcgagctcgggacagacccaaa
ccacggcgccgaccacgacccaaagaggcgggagagaccacccggaggtcccggtccgct
ccggcccagagcagcccgagcgtccccctgcagcccacgcacactgcacaccacgagggc
ttcctgttccgcaagctggacatcgagaccctgaagaagagtaccaatagcaggtcttgg
gtcaacctgtactgcgtgctgaaagaaggggagatgggtttctacaaagacgccaagaac
atggccacgtcctacaacaacgagccgctgctcaacctgtcccactgccactgcgacgtc
accaacggctacaagaagaagaagaacgtcttcacgctcaaaacgaaggacggcagtgag
tttttgtttcatgcgaaagatgaggacgacctcaaggtttgggtgggcaacatcacggcc
agcatcacggagcacgaggagattgccaaatggggtcagccccaaccaactacctcatcc
accgacgagggcacgcggcgcgacggcagcaaggcggacaaccggtcagagcgggggggg
gagcgctcggaccggggagaccgcatcgagccggcggatattgaaaaggacaaagagaga
gacaaggagaaggagaaggagaggggggagcggtcagagaggtcggagcgaggcgggaag
tcggaagcaaagcgatcggaaaagtctggtaagaaaaagtga
DBGET
integrated database retrieval system
