Trematomus bernacchii (emerald rockcod): 117471238
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Entry
117471238 CDS
T09643
Symbol
chrnb4
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-4 isoform X1
KO
K04815
nicotinic acetylcholine receptor beta-4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117471238 (chrnb4)
04082 Neuroactive ligand signaling
117471238 (chrnb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117471238 (chrnb4)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117471238 (chrnb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
117471238
NCBI-ProteinID:
XP_033971987
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MTRVLSIFAYFFSLIHCTSSADSEERLMNWLLGEDRYNLLIRPAVNRSERVPVKLQVSLA
QLISVNEREQIMTTNVWLTQHWVDYRLSWDPEKYEGIKKLRIPSRHIWLPDIVLYNNADG
TYEVTVFTNAIVFSNGTINWLPPAIYKSACKIEVKHFPFDLQNCTLKFRSWTYDHTEIDL
ILKSEMASMDDFTPSGEWDILALPGRRTVNPLDPTYVDLTYDFIIKRKPLFYTINLIIPC
ILITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTM
VLVTFSIITSVCVLNVHHRSPSTHTMPSWVKLIFLVKLPALLFMRRPQNNSARQRLRQQR
CLRGRRSILGMGYPVRAKTGITMSNSALLSSDSAFSTPGHKTVVPPLGYSHSNRKGDTRP
NDYLPSSFTSTQDSQPRSNSDWAANVQEAVNGVRFVAEHMMGDDDDQSVIEDWKYVAMVV
DRMFLWIFVIVCVTGTLGLFLQPVFQTQIVPNQQPSSEAPRI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtgttctctccatcttcgcatacttcttctctttgatccactgtaccagcagt
gctgactcagaggagcgtctcatgaactggttgctgggagaggatcgctacaatctgctc
atccgcccggcggtcaacaggagcgagagagtcccagtgaagctgcaggtgtctctggct
cagctcatcagtgtgaatgagagagagcagatcatgaccacaaatgtctggctcactcag
cactgggtggattacaggttatcatgggaccctgaaaagtatgaaggtatcaagaagctg
cgcattccctccagacatatctggctaccagatattgtcctgtacaacaacgctgatggt
acctatgaggtaacagttttcacgaatgccattgtattctccaatggcaccatcaactgg
ctccccccggccatctacaaaagtgcctgtaagatcgaggtcaagcattttcccttcgac
ctgcagaactgcaccctcaagttccgctcttggacgtatgatcacaccgagatcgacctg
atcctgaagtctgagatggctagtatggatgattttacgcccagtggggagtgggatatc
ctggcgctgccgggcagacggactgtcaaccctctggatcccacatatgtggacctcaca
tatgacttcattattaagaggaagccccttttctacaccataaacctcataattccttgc
attttgatcacctctctggccattctggtcttctacttaccctcagactgcggggagaag
atgaccctctgcatctccgtgctcttggctctcactgtgttcttgcttttgatctcaaag
atagttcctcccacctcattggatgtgcccctgatcggaaagtacctgatgttcaccatg
gtgctcgtgactttctccattatcaccagtgtgtgcgtgctcaacgtccaccatcgctcc
ccaagcacccacaccatgccttcctgggtcaagctgatattcctcgtcaaactgcctgcc
ttactcttcatgagacgccctcaaaataactctgcacgccagagacttcgccagcagcgg
tgtctacgggggaggagatccattttgggtatgggttacccagtccgagccaaaacaggt
atcacaatgtcaaattctgccctgctatcttccgactctgccttctctacaccaggacac
aaaactgtagttcctccgctgggctacagccactccaacaggaagggggacacgcgccca
aatgattaccttcccagtagtttcacttctacccaggactcccagccgagaagcaactca
gactgggctgctaatgtccaggaggcggtgaacggggtgcgctttgtggctgagcacatg
atgggagatgatgatgatcagagtgtgatagaggactggaagtatgtggctatggtggtg
gatcgtatgttcctgtggatctttgtgatagtgtgtgtgacgggcaccctgggcttattt
ctgcagcctgtcttccagactcagatcgtccccaaccaacagcccagctcagaggctcca
cgcatatga
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