Trematomus bernacchii (emerald rockcod): 117471239
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Entry
117471239 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117471239
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117471239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
SPRY
LRR_6
Motif
Other DBs
NCBI-GeneID:
117471239
NCBI-ProteinID:
XP_033971994
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGECIYFKRRHHSTDQRVHQQRFKVPSGQSAQQHQTDLDSIFMLLQENIVRFVEDELKKI
QRVLSLDYPESLESQREDEEVLDGEDEEQRSSREAFLNITLHFLRSMKQEELADRLQSRT
SAAVCQRKLKSTLKEKFQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEVNDEHEVRQIE
TASRKPHRPETTIRQEDLFKASPGRDAPIRAVMTKGVAGIGKTVLTQKFTLDWAEGKANQ
DIQFLFPLPFRELNVVRENKYSLVELVHHFFSETRDAGICRFDQFPVVFIFDGLDECRLP
LDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSACLWITTRPAAANQIPPECVDMMTEVR
GFTDPQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIMCHIPVFCWISASVLEDMLKTEGG
ELPKTLTEMYIHFLVVQSKVKNIKFDGGTETDPHWNKKSRKMIKSLGKLAFEQLQKGNLI
FYESDLTECGIDIKAASVYSGVFTQVFREERGLYQKDKVFCFVHLSVQEFLAALHVHLTF
ITSGVNLLAEEPATSRRLKVFRQKPKLTNLYQSAVDKALQSPNGHLDLFLRFLLGLSLET
NQTLLQGLIKEKEKSLDVKQETVQYIKKKIEEDMSAERSINLFHCLNELNDRYLVEEIQQ
YLRSGRLSTDNLSLAQWSALVFILLSSEKVLDVFDLKKYSASEEALLRLLPVVKASNKAL
LSGCNLSERSCAALSSVLSSRSSSLRDLDLSNNDLLDSGVKKLSAGLQSPHCELETLRLS
GCMVTEEGCVSLASALSSNPSHLRELDLSYNHPGDSGEKLLSAGLEDPLWRLDTLRLDHG
GEQWLKPGVRKYSCELTLDSNTAHRNLKLSENNRKVTRVGEEQPYPDHPERFDHWPQLMC
REALTGRCYWEVEWRGRVEISVTSRGIRRRGESKDLVFGRNDQSWSLDCFTGRYSVCHNK
REQLISSSSSSSSSGRVAVYVDLPAGSLSFYRVSSDTLIHLHTFRATFTEPLDPGFMLWS
EYSSVSLVFSV
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatgtatttacttcaaacgtcgacaccactcaactgatcaaagagttcatcag
cagagatttaaggtccccagtggtcagtcggcccagcagcatcaaactgacctggactcc
atattcatgctgctccaggaaaacattgttagatttgtggaggacgagctgaagaagatc
cagagagtcctgagtttagattacccagaaagcttagagagtcagagggaggatgaggag
gtgttggacggtgaggatgaagagcagaggagcagcagagaggcatttctgaacatcaca
ctgcacttcctgaggagcatgaagcaggaggagctggctgaccgtctgcagagcagaacc
agtgctgcagtgtgtcagcgtaaacttaagtccaccctgaaggagaagttccagtgtgtg
tttgagggcattgctaaagcaggaaacccaacccttctgaaccagatctacacagagctc
tacatcacagagggggggtctgcagaggtcaatgatgaacatgaggtcagacagattgaa
acagcatccaggaaaccacacagaccagaaacaaccatcagacaagaagacctctttaaa
gcctcacctggaagagatgcaccaatcagagcagtgatgacaaagggcgtggctggcatt
gggaaaacagtcttaacacagaagttcactctggactgggctgaaggcaaagccaaccag
gacatccagttcctatttccattacctttcagagagctgaatgtggtgagagagaacaag
tacagcttggtggaacttgttcatcacttcttctctgaaaccagagacgcaggaatctgc
aggtttgatcagttcccggtcgtgttcatctttgacggtctggatgagtgtcgacttcct
ctggacttccacaacactgagatcctgactgacgtcacagagtccacctcagtggatgtg
ctgctgacaaacctcatcagggggaagttgcttccctctgcttgcctctggataaccaca
cgacctgcagcagccaatcagatccctcctgagtgtgtggacatgatgacagaggtccga
gggttcactgacccacagaaggaggagtacttcaggaagaggttcagagatcaggagcag
gccggcaccatcatctcccacatcaagacctcacgaagcctccacatcatgtgccacatc
ccagtcttctgctggatctctgcttcagttctggaggacatgttgaaaactgagggagga
gagctgcccaagaccctgactgagatgtacatccacttcctggtcgttcagtccaaagtg
aagaacatcaagtttgatggaggaactgagacggatccacattggaacaaaaagagcagg
aagatgatcaagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatc
ttctatgagtccgacctgacagagtgtggcatcgatatcaaagcagcctcagtgtactca
ggagtgttcacacaggtctttagagaggagagaggactgtaccagaaggacaaggtgttc
tgcttcgtccatctgagcgttcaggagtttctggctgctcttcatgtccatctgaccttc
atcacctctggagtcaacctgctggcagaagaaccagcaacctcccggcgacttaaagtg
ttcagacaaaaacctaaactaactaatctctaccagagtgctgtggacaaggccttacag
agtccaaatggacacctggacttgttcctccgcttcctcctgggtctttctctggagacc
aatcagactctcctacaaggtctgattaaagaaaaagaaaaaagcttagatgtcaaacag
gaaacagtgcagtacatcaagaagaagatagaagaggatatgtctgcagagagaagcatc
aacctgttccactgtctgaatgaactgaatgatcgttatctagtggaggagatccaacag
tacctgagatcaggacgtctctctacagataatctgtctcttgctcagtggtcggctctg
gtcttcatcttactgtcatcagaaaaagttttggacgtgtttgacctgaagaaatactct
gcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctg
ctgagtggctgcaacctgtcagagagaagctgtgcagctctgtcctcagtcctcagctcc
cggtcctctagtctgagagatctggacctgagtaacaacgacctgctggattcaggagtg
aagaagctgtctgctggactgcagagtccacactgtgaactggagactctcagactgtca
ggctgtatggtcacagaggaaggctgtgtttctctggcttcagctctgagctccaacccc
tcccatctgagagagctggacctgagctacaatcatccaggagactcaggagagaagctg
ctgtctgctggactggaggatccactctggagactggacactctcaggctggaccatggt
ggagagcagtggttaaaaccaggtgtgaggaagtattcctgtgaactcaccctggactca
aacacagcacacagaaacctcaaactgtctgagaacaacaggaaggtgacacgtgttgga
gaggagcagccttatcctgatcatccagagaggtttgaccactggcctcagctgatgtgc
agagaagctctgactggtcgctgttactgggaggtcgagtggagaggaagggttgaaata
tcagtgacttcaagaggaatcaggaggagaggagagagtaaagaccttgtgtttggaagg
aatgatcagtcctggagtctggactgctttactggtcgttactctgtctgtcacaataaa
agagaacaattaatctcctcctcctcctcctcctcctcctctggtagagtagcagtgtat
gtggatcttcctgctggctctctctccttctacagagtctcctctgacacactgatccac
ctccacaccttcagagccacattcactgaacctctcgatcccgggttcatgttatggtca
gaatattcctcagtgtctctggtgttctctgtataa
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