Trematomus bernacchii (emerald rockcod): 117471256
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Entry
117471256 CDS
T09643
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117471256
03036 Chromosome and associated proteins [BR:
tben03036
]
117471256
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117471256
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117471256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
LIM
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_15
zf-C2H2_REST
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
117471256
NCBI-ProteinID:
XP_033972012
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MEGEVASMETSNELAPDGKSLTESGDALMQGAVLAAQGDVTDNMEMLVMDALDPALLQMK
TEVLESGGTVTVTGGDEGQIITLQVVNMEEQAGGALSLGQLQLVQVPVTATNVGGLQATF
VDASNVNKDSDPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELQCVREEEEPA
EMETNVSQQEDPEWTKDPDYQPISGLRGKGKKGKKSRLRYGEGDRDMDVSVYDFEEEQQE
GMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPH
KCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCDMAFVTSGELVRHRRYKHTHEKPFKCS
MCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHA
RFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEKGKKCRYCDA
VFHERYALIQHQKTHKNEKRFKCEQCDYCCRQERHMVMHKRTHTGEKPFACSQCEKTFRQ
KQLLDMHFKRYHDPNFIPTAFICSKCNKTFTRRNTMLRHTENCNGEVDEDEDENGTPTPK
KARRGRKRKMQSRRDEEDTEDELEDIEEEEELSELEVEQAPPVVPIPAPIEPPVKRKRGR
PPKNKPTTAAIIRVEDEATGEVDDIIVKKEVGADQVDQDDETVEQVVVGGEKTTIQLEEL
SQEEEGAIEAEAPPNGDLTPEMILSMMDR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgcttccatggagaccagtaatgaactggctcctgatggaaagagc
ctgacagagagcggagacgctctgatgcagggggccgtcctggctgcacagggggacgtg
actgacaacatggagatgctggtgatggacgctcttgatcccgctctgctacaaatgaag
acggaagtgttggagagtggaggcacggtgactgttactggtggagatgagggtcagatc
atcacacttcaggtggtgaacatggaggagcaggcaggaggtgcactaagtctcggtcag
ctgcagctggtacaggttcccgtcacagcaactaatgtaggggggctccaggccaccttt
gttgacgcatcaaatgtaaacaaggattcagatccggttatctgtcacactcttcccttg
cccgagggcttccaggtggttaaagtgggagccaatggtgaggtagagactgtagagcag
gaggagcttcaagcagcccatgatgagcttcaatgtgtgagggaagaggaagagcctgca
gaaatggaaaccaatgtgtctcaacaagaagacccagaatggaccaaggacccagactac
cagcccatctccggcctccgtggtaaagggaagaagggaaagaagagccgcctgcgctac
ggagagggcgatcgggacatggatgtttctgtgtacgactttgaagaagagcagcaggag
gggatgctgtctgaagtgaatgcagagaaagttgtgggcaacatgaagccaccaaagccc
accaagatcaagaagaaaggtgtaaagaagactttccagtgcgagttgtgtagctacacc
tgtccaaggcgctccaacttggacagacacatgaagagccatacagacgagaggccacat
aaatgtcacttgtgtgggcgggccttccgaacggtcactctgctgagaaaccacctcaat
acacacacaggcactcgtccacataaatgccaagactgcgacatggcatttgtgaccagc
ggagagttggtgcgtcatcggcgctacaaacacacacatgagaagcccttcaagtgctcc
atgtgtgactactgcagtgtggaggtgagcaagttgaaaaggcacatccgctctcataca
ggagagcgacccttccagtgcagtctgtgcagctatgccagcagagacacctataagctg
aaaagacatatgaggacacattcaggtgaaaagccatacgagtgctacatctgccatgcc
cgtttcactcagagtggaaccatgaagatgcacattctgcagaaacacacggagaacgtg
gcaaagttccactgcccacactgtgatacggttattgctcgcaaaagcgatcttggtgtt
catttgaggaagcaacactcatttattgagaagggaaagaagtgccgttactgtgatgct
gtgtttcatgagcgatacgctctcatccagcaccagaaaacccacaagaatgagaaacgc
ttcaagtgtgaacagtgtgactactgctgcagacaggaacgccacatggtgatgcacaag
cgcacacacacaggggagaagccctttgcctgcagccagtgtgagaaaaccttcaggcaa
aagcagcttctggatatgcacttcaagcgctaccacgaccccaactttatccccactgcc
ttcatctgctccaagtgtaacaagacgttcactcgcaggaacaccatgctgcgtcacact
gaaaactgcaacggcgaagttgatgaagatgaggatgaaaatggaactcctacgcccaaa
aaggcacgccggggcaggaagaggaagatgcagagcaggagggacgaggaagacacggag
gatgaactggaagatatcgaggaggaagaggagctaagtgagcttgaggtggaacaggcc
ccccctgttgtcccgatcccagcccctatcgagcccccagtcaagaggaaacgtggacgg
cccccaaagaacaaaccaaccacagccgctatcatccgtgtagaggacgaggccactgga
gaggtggatgacatcatcgtgaagaaggaggtgggagccgatcaagtggaccaggatgac
gagaccgtggagcaggtggtggtcgggggagaaaagaccaccatccagctggaggagttg
tcccaggaggaggagggggcaatagaggccgaggccccgcccaacggagacctgacccct
gagatgatcctcagcatgatggaccggtga
DBGET
integrated database retrieval system
