Trematomus bernacchii (emerald rockcod): 117471261
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Entry
117471261 CDS
T09643
Symbol
trim66
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 66
KO
K12032
tripartite motif-containing protein 66
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117471261 (trim66)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117471261 (trim66)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
ANCHR-like_BBOX
DUF745
Motif
Other DBs
NCBI-GeneID:
117471261
NCBI-ProteinID:
XP_033972017
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MEKSCSECSVPTLAHSLCTLCNKWLCYQCTDVHQHQRAPTTSQYTDMHQQHRPGAPPCSD
LHQRGSSSLSPTGQGPGSYPCSLLMCHSHRQEPLELFCESCDLLCCSSCHLSSHKNHRVV
QIGKALQDQQWLFESLVVQVDERRSAVENNAKQIEDRLHGVKIAHRKAENQIKMAKMIMM
NELNKRANLLIEQLEKISEDFQQRLEDQLQGAIEICGQLDHVQKFITWATTHHCRGPVLF
SRALISLQMQQLLDSSLHSDSGSPVKIKFNWDASYWTKQISSLGQLTVEGGNCTYPQGLA
CSSILRPQPIPCLSLPSVCHRGREPGCGYQSCCETQMCCLHGVPSQPDMSSLEKSQLEAT
LYRSSCVQPALISASLHQSQQLQKCWDRESVSHCPPASSPVRITGPINCSRGSTSQPQAV
ASQLQSQNKSYLYRQHQREVLLDSQTQPSAERSGPGQHQRKLSTSTLQQDLSHTGVDRDL
LTEEDWKGRRRVEEAGGQTAAVESRELLGVEVQQDRRGQSPVQQQLLGPPELRRELQRNR
PALRLRDQRDGRSSTSLEVSLTAHECLSDVQSSRLSPSLGCTRRERRSQSIPAELAAPST
SPHSERPTGCTHRLQPGTATKYVSMDPRQRRASDGVLCVVKETSPHTAPSRGHRSPLSYK
TEPDHSFTCVDEEIDYEAKEKSRATRNDQNRDVQKDSGKPRVPVVCLERLKILVSQLPPH
GRRQSDPLPTSRTEKSETLRNWQDATPEGISGGSETTRTPHSITASPYAQRNQSTTHLTT
SEFDSRVRISCRKVSTPPSVDPKYVPQIYSSLDLDSESDPRSASEDAVISRADPAKQLNS
DATPDSNAESSSEAELEYLAEEKSAGEIGLCDENDITGDSEPSLEYEADPESDPAAGSED
GQELDGDPGIESDVQPDYDHSSQAETDSEAVSDQPVDSQGSVESELDVESEPELTTDDPQ
PLRSDLEEDAHIGSAQRTLLMANADDQGCSEEVQSDLDNAEMESEDFCAVCLIGGDLLCC
DRCPKVFHLSCHIPSLLSFPSGDWVCSLCRDVVTPEVEYDCENERTSAEHTSAHGPPACD
QRKCERLTLLILSNVLSAPFHEPVSPLARHYYQIIKRPMDLSVIRAKLNKRNTHHYNSPE
QFVADVYLMFRNCAKFNYPDSEVAQAGRSLEAFFTSKLKDVYPDRVFVVAEADSDSDEYD
EAYRTAESGFPWPERREQCHRKRKRRHSLKSRRQNF
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagctgctcagagtgctcagtgccgactcttgcacacagcctgtgtacactc
tgcaacaagtggttgtgttaccagtgcacagatgtgcatcagcatcagagagcccccacc
acttcccagtacacagacatgcaccagcagcataggcccggtgcccccccgtgctctgac
ctgcaccagagaggctccagctccctgtctccgactggacaaggcccagggtcgtatcct
tgttccctcctcatgtgccactctcacagacaggagcccttggagctgttttgtgagtca
tgtgaccttctgtgctgtagcagctgtcacctgtcctcccacaaaaaccacagggtggtg
cagatcgggaaggccctccaggaccagcagtggttgtttgaaagcctggtggtgcaggtg
gatgagaggaggtctgcggtggagaacaatgctaagcagatagaggacagacttcatgga
gtaaagattgcacacaggaaggcagagaaccagattaaaatggcaaagatgataatgatg
aacgagcttaacaaacgagccaacctattaatagagcaactggagaaaatctctgaggac
ttccagcagcgtctggaggaccagctgcagggggcaatagagatatgtggccagctggac
catgttcagaagttcatcacctgggctacgacccaccactgcagaggcccggtgctcttc
agcagggctctgatttctctccagatgcagcaacttcttgactcgtcactccactcagac
tctgggagtcctgttaagatcaaattcaactgggatgctagttactggactaagcagatt
tcctcattaggccagctgactgttgaagggggaaactgcacgtatcctcagggcttggcc
tgctccagtattctccggcctcagcccatcccctgcctgtctctgccgtccgtgtgtcac
agaggacgagagccgggctgcgggtaccagagctgctgcgagacccaaatgtgttgcctg
cacggcgttccctctcagcctgatatgtccagcctggaaaaaagccagctggaagccacg
ctttatagatccagctgtgttcagcctgctcttatctctgcctccttgcaccagagccag
cagctccagaagtgctgggaccgagagagtgtctcacattgtcctcctgcatcttcacct
gtccggatcacaggacctatcaactgcagtcgaggatctacatcccagccacaagctgtc
gcctcacagctccagtctcaaaataaatcgtatctctaccgccagcaccagagagaagtt
cttctagacagccagactcagccgagtgcagagcgcagcgggccaggccaacatcagagg
aagctgtccaccagcactctgcagcaggatctcagccacacaggcgtggacagagacctg
ttgactgaagaagactggaaggggagacgcagagtggaggaggctggtggacaaacggca
gcagttgagagcagggagctgctgggtgtggaggttcagcaggacaggagggggcagagt
ccggtccaacagcagctccttggtcctccagagctgaggagagagctgcagagaaacaga
ccagcactgagactcagagaccaaagagatggcaggagctccacatccctggaggtgtcg
ctgacagcccatgagtgtttatctgatgtgcagagcagcagactcagcccttctttaggg
tgcacaaggagggaaagacgctcccagagcatccctgcagaactggcagccccgtctacc
agccctcactctgaaaggcccacaggatgcactcacagactacagccaggaactgcaact
aagtatgtcagtatggaccccaggcagaggagagcttcagatggggtgctttgtgttgtg
aaggaaacctcgcctcacacagcgccctccagaggacaccgctctcctctgtcctataag
acagagccagatcattcctttacatgtgtcgatgaagagattgattatgaggccaaagag
aaaagcagggcgacaagaaacgaccaaaacagagacgttcagaaggactcaggaaagccc
agggtcccagtggtttgcctcgagcgtctcaaaatacttgtgtctcaactccccccacat
ggacgacggcagagcgaccccttacctaccagccgcacggagaagagtgagactctgaga
aactggcaagatgcaacacctgaagggatatctggaggctctgagaccaccaggacccct
cactccattacagcatcaccatatgcacagcgtaatcagtctaccacacacttgaccacc
agtgagtttgacagccgagttagaatcagctgtcgtaaagtatccacgcctccgtctgtt
gaccctaaatatgtgccacagatatactcttcattggacctggactctgaatctgatccg
agatcagcttcagaggacgcagtcatttccagggctgatccagccaaacagctaaactca
gatgcaacaccggattcaaatgcagagtcttcatctgaggctgaacttgaatatctggct
gaggagaaatcagcaggagagattgggctctgtgatgagaatgatatcacaggggattca
gagccaagtcttgagtatgaggcagacccagaatcagatccagcagcaggatcagaggat
ggccaagagctggatggggatcctggaatagagtcagacgtccagcctgactatgatcac
agttctcaggcagagactgactctgaggctgtgtccgatcagcctgtagactctcagggc
tcggtggagtctgagctcgacgtagagtctgaacctgagctaacaaccgacgacccccag
ccgctccgctctgacctggaagaggacgcccacattggatctgctcagaggacacttctg
atggcaaacgctgacgatcagggatgctccgaggaagtccagtctgacctcgacaatgcc
gagatggagagcgaggacttctgtgctgtgtgtctgattggaggggatctgctgtgctgt
gaccgctgtccaaaggtttttcatctgtcttgccacatcccatctctactaagcttcccc
tcaggtgactgggtgtgcagcctctgcagggacgtggtaacgcctgaggttgagtatgac
tgtgagaatgagagaacatctgcagaacacacatcagcacatggaccgcctgcatgtgac
cagagaaaatgtgagcggctgacccttctgatcctcagtaacgtcctgagcgctcccttc
catgagcccgtcagtccacttgctcgtcattactaccagatcatcaagaggcccatggac
ctgtctgtgatcagagccaaactcaacaagaggaatactcatcattataactcaccagaa
cagtttgttgctgatgtctatctcatgttccgcaactgtgcaaagttcaattatcctgac
tctgaggtggcccaagcaggccgcagcctcgaggcgttcttcacttccaagctgaaagac
gtttacccggaccgagtttttgtcgtggccgaggcggactctgacagtgatgagtacgat
gaggcctacaggacggcagagagcggattcccctggccagagcggagagagcagtgccac
aggaagagaaagaggagacactctctcaagtccaggagacaaaacttctga
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integrated database retrieval system
