Trematomus bernacchii (emerald rockcod): 117471270
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Entry
117471270 CDS
T09643
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b
KO
K08031
paired box protein 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117471270 (pax6b)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117471270 (pax6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
117471270
NCBI-ProteinID:
XP_033972029
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MPQKEYHSQAAWESGVASMMQNKVYDICDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQTHDEVQVLDSEKVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATP
EVVAKIAQYKRECPSIFAWEIRDRLLSEGTCTNDNIPSVSSINRVLRNLASEKQQMGADG
MYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCPQPDGAGENTNSISSNGEDSEETQ
MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR
RAKWRREEKLRNQRRQANNSSSHIPISSSFSTSVYQAIPQPTTPVSFTSGSMLGRPDSAL
ANTYSALPPMPSFTMGNNLSMQPSQTSYSCMLPTSPPVNGRSYDTYTPPHMQAHMNSQSM
SASGTTSTGLISPGVSVPVQVPGGEPDMSQYWSRLQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaaaagaataccacagccaagccgcgtgggagtctggcgtagcctcaatgatg
cagaacaaggtgtatgacatctgtgatgaaggtcacagtggcgtaaaccagcttggtggt
gtgtttgttaatggtagaccgctgccggattccaccaggcagaaaatagttgaacttgct
cacagtggtgctcgaccctgcgacatctccaggatactgcagacccatgatgaagtccaa
gtgctggacagtgaaaaggtatccaacggctgtgtgagcaaaatactgggccggtattat
gaaactggctccataagaccgagagcaataggcggcagcaagcccagagtcgccactcca
gaggtggtcgcgaaaatcgctcagtacaaacgggagtgtccgtctatctttgcgtgggag
atccgtgacagacttctgtcggaggggacctgcaccaacgacaacatacccagtgtgtca
tcgataaacagagtcctccgcaacctggctagtgaaaagcaacagatgggcgcagatggc
atgtatgacaaactgagaatgctcaacggtcagacaggaacttgggggacccggcccggc
tggtaccccggaacatcagtgccaggccagcccaaccaagatggttgcccacaaccagac
ggtgcaggcgaaaacacaaactctatcagctcgaacggggaggattcagaggagacacag
atgagactgcagctcaagaggaaactacagagaaaccgcacgtccttcacacaggagcag
attgaagcactggaaaaagaatttgaaaggactcattatccagatgttttcgcgcgagag
agactagcagcgaaaatcgacctgcccgaagcaagaatacaagtatggttctcaaacaga
agagcaaagtggaggcgagaggagaagctgcggaaccagcgccggcaggccaacaactcc
tcctcccacatccccatcagcagcagcttcagcactagcgtctaccaggccatcccacag
cccaccacaccggtgtctttcacctcggggtcaatgctgggtagacctgactctgcactc
gcaaacacttacagtgcgctgccccccatgcccagcttcaccatgggaaacaatctatct
atgcaacccagccagacctcttattcctgcatgctgcctaccagtccgcctgtgaacggg
cggagctacgacacatacacgccccctcatatgcaggcacatatgaacagccaatcaatg
agcgcttctggtaccacctcaacaggactcatctctcctggagtgtctgtccctgtccag
gtcccagggggcgagcctgacatgtctcagtactggtcaagactacagtag
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