Trematomus bernacchii (emerald rockcod): 117471290
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Entry
117471290 CDS
T09643
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117471290 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117471290 (lrrc4cb)
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
NGL family
117471290 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
117471290
NCBI-ProteinID:
XP_033972061
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MLNTMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLIRLEELEMSGNQLTVVKPSAF
LGLVNLQKLWMMHAQIQTLERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHSPAVYKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGSLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIESPGDYSQTPLPPFGWVS
SSTTKGTPISTRTTERTYTIPVLDPDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSSYHH
GPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctattcgtgctgcttttggcccttcagatcctggtcgtggct
gggctggttcgcgctcagacctgtccttctgtctgctcatgcagcaaccagttcagcaaa
gtaatatgcacccgccgaagtctacgggacgtcccagatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcatccaggtcatcaaggtggacagtttcaaacatctg
cgccatctggagatcctgcagctgagcaaaaaccacattcgcaacattgaaattggcgcc
tttaatggactggccagtctcaacactttggagctttttgataatcggctcacgacaatc
cccaatggagcatttgagtacctgtccaagctgaaggaattgtggctacggaacaacccg
atcgaaagtataccatcttatgccttcaaccgagtcccctcgcttcgaaggctggatcta
ggtgagctcaaacgtctctcttacatttctgatggagccttcaaggacttgagcaacctg
cgctacctaaacctgggaatgtgcaacctcaaggagatcccaaacattttacctttgatc
aggcttgaagagctagaaatgtcaggaaaccagctcactgttgtcaagcccagcgcattt
ttaggattagtgaacctccagaagctgtggatgatgcatgcccagatacaaactttagag
aggaattcctttgatgaccttcagtctctggtggagctcaacctagctcacaacaacctt
acctttctaccacatgacctcttcacaccgttgcatcgcctggagcgggtccacctccat
cacaacccttggaactgcaactgtgatatcctgtggctcagctggtggctgaaggagaca
gtacccgctaatactagctgctgcgcccgttgccattcgcctgcagtctataaaggtcgc
tacattggggaattggaccacagctacttccagtgcgatgttcctgtcattgtggagcca
cccagtgacttgaatgtgacagaaggcatgggtgcagagcttaaatgtcgtacaagctcg
ctgacatccatcagctggcttacaccaaatggctcgctggtgacacatggggcttacaag
gtacgtttgtctgtactcaatgatgggtcactgaactttactagtgtcaccatgcaggac
actgggacttacacctgtatggtaagcaacacagcaggcaacatttctgcctctgctgtg
cttaatgtcacttctgtggaaaacagcggggtgacctattttaccacagtcactgtggag
accattgagtccccgggggactatagccaaacgccacttcccccatttggctgggtgtca
tcctcgacaacaaaaggtactcctatttccacaaggaccacagagcggacttacaccatt
ccagttcttgatccggatggagagggagccctcaatggcctggatgaggtgatgaaaact
accaagattatcattggctgcttcgtggccataacgctaatggctgctgttctgctggta
attttctacaagatgaggaagcaacataaccagcaggatccggatggccctgcctcctcc
atggaggtcattacagttgaagaagagcttgcaggtgttgctgccatggagagacaccta
tcgctgcctcctctggagcactacaaccactacaacacctacaagagcagttaccaccac
ggtcctatgctcagtaccatacacagctcagccacacaggaacctttactgattcaagcc
tgctcaaaagacaatgtacaagagacccaaatctga
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