Trematomus bernacchii (emerald rockcod): 117471318
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Entry
117471318 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117471318
Transcription factors [BR:
tben03000
]
Eukaryotic type
Other basic domains
RF-X
117471318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
117471318
NCBI-ProteinID:
XP_033972107
LinkDB
All DBs
Position
Unknown
AA seq
1439 aa
AA seq
DB search
MLSSPRTPSHASRPAQPSAPTPRPNVMAEEDQQPPPDRGASSMPGLLTGLQGAEASALQL
RIKNSICKSVQSKVENILQDVERFSDIEKLYLYLKLPSGPNTNIEKSEQSALSSSRTQQM
HAFNWIRHHLEEYPETSLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRL
GMRGKSKYCYSGLRKRLVIHMPSLPTLDLHKTGDGLQCDVLDSPGQLGGIKEDVRFAACD
LVCEWAQKVLKRQFDVVEDLARFLIDSHYISNKSLAALTIMTGTATEVKLPQTVSAFVPA
AEALSFQPHVMTLSSPSVDAKQQLQRKLQRKQQEQKLHSPFPGEGQTKRAESVPCASPTP
PSPQPTIGIMVAAVQSPLTVQRSRQLMCPSPLGTVENKMMPINFQMVTQQVQAVRHSPKN
ILASPMGERTARQRYAQILPKPVATTAITLRSPSTMIISNSPVKTMMTTCHVSPVSLVNL
TAISLATNSSNTTTSFTNATLRPASTGVSSSAEDVSFSRSMRSASAVPIQAPVARPGQTT
NTQTIDVEMEVEAIHKNSQMQNPGSLNCSHEAMVNRAVGALQRAASVPIPQSKGFLESTS
ISNCHGRSSSGINTAVQSSNNGADNTSNLHLTPSTQNTSAVPLLNTSTPTSFGENGGVTA
AKEGFLSTKNLRKRSCFSPDFSPIKRAFMPQQPEPEGAAGLGYGTRNTVGNILRPGAPTR
PESAPVTREVEMKMISPQAHSLCTSSFRSSGFYSVARSQSSMQRKTTPTVMENSISDSHS
LMQQQQGHTTPNVHAIPNNTGFQTLTGVSDVRSLSCQPNIYTQSNSEPLDFLNQATISSQ
LPMQTDMDYFHFDDDVTQDSIVEELVQMEEQMKLNNMQEFGGCVTPQGQQAAMPDNMMST
NQTMTSFYHAANSHSNPMQTPTPTPTPTPTPTSEMLGGPQRFTVESPFSRIASTTPVDSA
LGSSRHTPVGTPHSNCSSTVPPSPVECRNPFAFTPINSSIPGFHDGNTVSSSPVKPMQRP
MATHPDKTRLEWMNNSYNSSSLNKSNCGMGILPGYQGLIGDQFQKPHAFAVPHARHHDGH
FGRLTPISPVQQQQAANMAKQEGFAVPAPLDNKATNSPATTFRCRSVSPAVHQRNLTGNT
GNLSHMPRSVVSPFNSPVTPEMLNIFANSHTNLGLSSMAQRSHSVPLNVMMQTEVQTTSG
QQCNSNNITNVLLSKLEGDHDNNVRGLGINNLPSSYTARMNLTQILESDPDLSCSDNHLS
LMKSDPTSTCKMQRPNYLMENAINEQMIILAGDHRVQSAIGEQHRQQAQSMLLTSQQHQE
ELQHQLDFSSTMKNLLTDNGLTAGTQLMDQVSELTTGGADFPCEIRMTSELSSSINDLNA
LDTELLFDPNQQQGQYQNAAAEEELVNDALFQQITSDTAHSNGLDWLESKDQPTVGLMG
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctagcccgagaacaccctcccacgcctcccgtccagcccagcccagtgcaccc
accccgaggcccaacgtgatggccgaggaggaccagcagccgccgccggaccgcggggcg
agcagcatgcccggcctgctcaccgggctgcagggcgccgaggccagtgcgctgcagctc
cggatcaagaactccatctgcaaatctgttcaatcaaaagtggaaaacattctgcaagat
gtggagaggttctcagacattgaaaaactctacctctaccttaagttgccttctggtccg
aacactaacatcgagaaaagtgagcagagcgccctgtcatccagccgcacgcagcagatg
catgcgtttaactggatccgccatcatttagaggaatacccagagacctctcttcccaaa
caggaggtctatgatgaatacaagagcttctgtgacaatctgaactaccatccactgagt
gcggcagactttgggaaaatgatgaaaaatgtcttcccgaacatgaaggctcgtcgactt
ggcatgagaggaaaatcaaaatattgctatagtggactgaggaagaggctggttattcac
atgccatctttacccactctggatcttcataaaacaggggacgggctccaatgtgatgtc
ctggattcaccgggccagctgggcggtattaaggaagatgtgaggtttgcagcctgtgat
ctggtgtgtgagtgggcccaaaaggtgctgaaacgccagtttgatgtcgtggaagacttg
gcccgcttcctgatcgacagccattacatcagcaacaagtccctggcagcgctcaccatt
atgaccggcacagcaacagaggtaaagcttccacagacggtgtcagcgttcgtcccggcc
gctgaggctctctccttccagcctcatgtgatgactctgtcctcgccgtctgtcgatgca
aagcagcagctccagagaaagctccagaggaaacaacaagagcagaagctgcactctcct
tttcctggagagggacaaaccaagagggcagagagtgtgccttgtgccagccccacccct
ccgtcacctcagcccaccattggcatcatggtcgctgcagtgcagagccccctcacggta
cagagaagcaggcagctgatgtgtcccagtccactgggaacagtggagaacaaaatgatg
cctattaacttccaaatggtgacccagcaagttcaggcagtgaggcatagtcccaaaaat
attctagccagtcccatgggagaacgcactgcccggcagcgatatgcgcaaatcctgccc
aaaccggtggccacgactgccatcactttgcgctcgccctccaccatgatcatcagcaac
agccctgtgaagaccatgatgaccacatgtcatgtcagcccggtcagtttggtcaacttg
acagccatatcgctggcaaccaacagcagcaataccaccacttcctttacaaatgccact
ctgcggccggcctctacaggcgtaagtagttctgcagaagacgtcagcttcagtcggagc
atgaggagcgcctctgcagtccccatccaggccccggtggccagaccagggcagactact
aacactcaaaccatcgatgttgaaatggaagttgaagctatacataaaaacagccaaatg
caaaatcctggctctttgaattgttctcatgaagccatggtaaacagagctgtaggggct
ttacagagggctgccagtgtgcccatacctcagtctaaaggcttcctggagagcacctct
atctctaactgccacgggaggtcctcctcgggcattaacactgcagtccaaagcagcaat
aatggtgctgataatacaagcaacttgcacttaacaccttccactcagaataccagcgct
gttcctttactgaacaccagcacaccaacttcttttggggaaaacggcggagttacagca
gcaaaggaaggtttcctgtctactaagaacctcaggaaacgttcatgcttcagtccagat
ttttctccaatcaaaagggcttttatgccccagcagccagagccagagggcgctgctggt
ttaggatatgggactagaaacacggtcggtaacatcctgcgcccaggagctccaactaga
cctgaaagtgcaccagtgaccagggaggtagagatgaaaatgatctcccctcaagcccac
tcactctgcacttcctctttcagatcgagtggattctactctgttgccagatcacagagc
tcaatgcagaggaaaaccactcccaccgttatggaaaatagcatctcagacagtcactca
ttaatgcagcaacagcaggggcacacaacgcctaacgtgcatgccatacctaataacacc
ggcttccaaacacttacaggagtgagtgatgttaggagtttaagctgtcaacccaatatc
tacacccagtctaactctgaaccattagactttttgaatcaagccacgatatcaagccag
ctccctatgcagacagatatggactactttcactttgatgatgatgtgacccaggacagc
attgtggaggagctggtgcagatggaggagcagatgaagcttaacaacatgcaggagttt
ggaggctgcgtcacaccacaaggccaacaggcagccatgccggacaacatgatgtccacc
aatcagaccatgacttctttctatcatgctgcaaacagccacagtaacccaatgcagact
ccgacacccactcctactcccacaccaacaccaacatcagagatgctgggaggaccccaa
cggttcaccgtagagagccccttctcccgcatcgcctccaccaccccggtggatagcgct
ctgggaagcagtcgtcacaccccagtgggtacgccacactccaactgcagcagcaccgtg
cctcccagtcccgtggagtgcaggaacccgtttgcctttacacccatcaactccagcatc
cctggtttccatgacggcaacaccgtctccagcagcccggtcaagcccatgcagaggccg
atggcgacccacccagacaagaccaggctggagtggatgaacaacagctacaacagcagc
agcttaaacaagtcaaactgtggaatgggaatcctccccggctatcaaggcctgataggt
gaccaatttcaaaagcctcacgccttcgccgtccctcatgcgcggcaccacgacggccat
tttggtcgcttgactcccatctcgcctgttcagcagcagcaggcagctaacatggccaag
caggagggctttgctgtgcctgcccctctggataacaaagccaccaactcaccagctaca
acttttcgatgtcgcagtgtaagccccgctgttcatcagaggaacttgaccggaaacacg
ggaaacctttcccatatgcctcgttcagttgtgtctccctttaactcccctgtgacgcct
gagatgttaaacatatttgcaaacagccatacaaatctcgggttgagcagcatggctcag
aggagccattctgtaccgctcaacgtcatgatgcaaactgaggtccagacaacgtcagga
caacagtgcaacagcaataacatcaccaatgttcttctgagcaaactggagggggaccat
gacaacaatgtccggggtctgggcatcaataacttaccctccagctacactgcacgcatg
aacctcacccagatcctggagtctgaccccgacctctcctgcagtgacaaccacctcagc
ctgatgaaatctgaccccaccagcacatgcaagatgcagaggcctaattacctcatggaa
aatgctattaacgaacaaatgataatcttagcaggtgatcaccgagtacaatcagctatt
ggggagcagcatcgacaacaggcccagtctatgctgctaacctcacagcagcatcaagaa
gaacttcagcatcagttggatttcagcagcactatgaaaaacctcctgactgacaacggc
ctcactgccggcactcagctcatggaccaggtgtctgagctgactacaggcggggcagat
ttcccttgtgagatcagaatgacctcagagctctccagcagcatcaacgacctcaacgcg
ttggacacagagcttctgtttgaccccaaccagcagcaagggcaatatcaaaatgctgct
gcagaggaggagctggtgaatgatgcgctgtttcagcaaattaccagcgacacggcacat
tcgaatggactcgactggcttgaaagcaaagatcaaccaactgtagggttgatgggttga
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integrated database retrieval system
