Trematomus bernacchii (emerald rockcod): 117471343
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Entry
117471343 CDS
T09643
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
tben04148
Efferocytosis
tben04218
Cellular senescence
tben04310
Wnt signaling pathway
tben04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117471343 (nfatc3a)
04310 Wnt signaling pathway
117471343 (nfatc3a)
04020 Calcium signaling pathway
117471343 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117471343 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
117471343 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117471343 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117471343 (nfatc3a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117471343 (nfatc3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
117471343
NCBI-ProteinID:
XP_033972179
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MTTANCPGNEELDFRLIFGEDGQQQPLGPADLEPDDNTSFYILNVGQPQSMITNHQSVGL
PRHGMQSHSQFISSSPRLHSHRQGSDPPRYEAPDSKYGSSPLLPSAPVEAPKAFECPSIQ
ITSISPSCQQEMDANEQDLRANGPDGDYHVDRPLSRDHLYLPLDHSYRDSSLSPSPCSSL
SSRSWFSDASSCESFSHVYDDVDSELNEAAARFTLGSPLTSPGCISPQTCGGVLEEQPNW
QHHHPAFVHHSHSISLSPRTSPCHSPRTSVTDENWLSPRPTSRPSSRPTSPCGKRRHSSA
DICYPGSLSPHHSPSPTPGPSPRGSVTEDTWIGSPSLGMSPFQCCPSEADIPSKTRKTSQ
DRTAMQTGTGEMGLDDQGNMSPNLDSPSDDGLHSLKKDGPGEQFLSVPSHFSWNKPKPGH
TPIFRTSSLPPLDWPLPSQFGQYELKIEVQPKAHHRAHYETEGSRGAVKASSGGHPIAKL
IGYTEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIVVTSTKVLEIPLLPE
NNMTAGIDCAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGKVLSLQAASIP
VECSQRSAQELPQVEKFSLTSCLVSGGEEMVITGSNFFPESKVIFLEKGPDGRPQWEVEA
KIMREKTQGSCIIVEVPPYHSKSVGSAVQVQFYVCNGKRKRSQSQRFTYLSVLVKQEHRE
ELDLSAVSPMSLPLAHAGGLVRPQLPSPEQCHPSDGLLSSSPHGLLPLQGPCPSLGSPSF
QHLPHLQSRSLHHPPADCHMTFHPTPAPLPAPPRPSYQSMQHGHSHSLPFNGQSPLPLQG
YERIPFQHSVSAASHPMGMGMVYPSSPCSSPSAPPSSNSIAGSPQSQQPMLSPSSPRLHT
LGGYHCSPNPPQVPSPGGHPLVGQLQRAMGYHPVGQRSASCPTPSSAPATRMIPSPHSGP
SSPQLHSLPYQSPTSSSPTSGGSPLGPMQQQQQQQQQQQQHSGQHSPQATSPVMASLSPV
AAGPLIHPLSPQGPFPSDKERPDIKEEPEEKEPTFRSIGLQDITLDDVNEIIGRDMSQSP
STHGPPSAHNQS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgctaactgccccgggaatgaggagctggacttcaggctgatcttcggggag
gacgggcagcagcagccgctggggcctgcagatctggagcccgatgacaacacgtcgttc
tacatcctgaatgtgggccagccccagtctatgatcaccaaccaccagtctgttggcctg
cctcgtcatggcatgcagtcccactcccagttcatcagctcctccccacgccttcactca
cacagacaaggatcggatcctccgagatatgaagccccagactccaagtatggctcctcc
cctctgctgccctcggctcctgtggaggcgccgaaggccttcgagtgccccagcatccag
atcacctccatctcccccagctgccagcaggagatggacgccaatgagcaggatctgagg
gccaatgggcctgatggggactatcatgtggataggcccctgtccagagaccacctgtac
ctgcctctggaccactcgtaccgggactcttcgctcagcccgagtccgtgcagcagcctc
tcctctcggagctggttctctgacgcctcctcatgtgaatctttctcacacgtctatgac
gatgttgactcggagctaaacgaggcggcggcccgcttcaccctcggctcccctctgact
tccccgggatgtatctcccctcaaacctgtgggggggttttggaggagcagcccaactgg
cagcaccatcaccccgccttcgtgcaccactcccactccatcagcctgtcaccccggacg
tccccgtgccactcgccacgcaccagtgtcaccgatgagaattggcttagcccgcgtccc
acctctaggccctcctcacgtcccacctcaccctgtgggaagaggcgccactccagcgct
gacatctgctacccaggctccttgtctcctcatcactcaccctcacccacgccaggacct
tcacccaggggcagcgtgacggaggacacatggatcggcagtccttctttaggcatgtct
cccttccagtgctgtccatcagaggcagacatcccgtccaagacgaggaagacgtcgcag
gacagaacagcaatgcagactgggacaggggagatggggctagatgaccaaggaaatatg
tctcctaatctagactctccttctgacgatggtctccacagtctgaagaaggacgggccc
ggggaacagttcctctcagtgccctctcacttctcatggaataaacccaaacctggtcac
acgcccatattcaggacctcctcactgcctcctctggactggccgctgccgagccagttt
ggccagtatgaattgaagatagaagtgcaacccaaagcccaccaccgagcgcattacgag
accgagggcagccgaggagccgtcaaagcttcttccggtggccacccgattgccaagctc
attggctacactgagaagcccatcaacctgcagatgttcatcggaacagcagacgaccgc
tacttgaggccgcacgccttctaccaggtgcaccggatcaccgggaaaactgtagccacg
gccagccaagaaattgtagtcaccagcaccaaagttctcgaaattcctctcctgcctgaa
aacaacatgacagccggcatcgactgtgctggcatcctgaagctgcggaactcagacatc
gagctgcggaagggggagacggatatcggaaggaagaacacacgggtccgcgtggtcttc
cgagtccacatcccacaacccaacgggaaggtgctctctctgcaggccgcttctatccct
gtggagtgctcccagcgttcggctcaagagctgccccaggtggagaaattcagcctgacc
agctgtctggtcagcgggggagaagagatggtcatcaccggctccaacttcttccctgag
tccaaggtcatcttcctggagaaaggccctgatggacgaccacagtgggaagttgaggca
aaaataatgcgtgagaaaactcaaggatcgtgcatcattgtggaggtccctccctaccac
agtaagtctgtgggctcagctgtgcaggtgcagttttatgtctgcaatggcaagcggaaa
aggagccaatcgcaacgcttcacttacctatcagtgttggtgaaacaggagcacagagaa
gagctggacctctctgccgtctcccccatgtccctccccctggcccatgctggcgggctg
gtgcgcccccagctgccctctccggagcagtgccacccatcggacggccttctgtccagc
tccccccacggcctgctccccctgcagggcccctgcccctccctgggctccccgtctttc
cagcacctgcctcacctccagagtcgcagcttgcaccacccccccgcagactgccacatg
acgttccacccgacccctgctcctctccctgcgcccccccggccctcctaccagtccatg
cagcacggccacagccacagcctgcccttcaacggccagtccccccttccccttcagggc
tacgagaggattcccttccagcacagcgtctctgcagcgtctcacccgatggggatgggg
atggtgtacccttcctccccgtgctcctcaccatcagctcccccctcctcaaacagcata
gctgggtctccccagagccaacaaccgatgctctccccctcatccccacgcctgcacaca
ctcggaggctatcactgctccccaaacccccctcaggtgccctctcccggcggccacccc
ctcgtggggcagctgcagagagcgatgggctaccaccccgtgggtcagaggtcagcctcc
tgtcccaccccgtccagcgcccctgctaccaggatgatcccctctccccactcagggcct
tcctcccctcagctccactcgctgccctaccagtctcccacctcctcctcccccacatca
ggtggcagtcctctggggcccatgcagcagcagcagcagcagcagcagcagcagcagcag
cactcaggtcagcactccccccaggccaccagcccggtcatggccagcctctccccggtg
gcagcggggcctctgattcaccctctgagcccacagggacccttcccctcggacaaagag
aggccggacatcaaagaggagcctgaggagaaggagcccaccttccgctccatcggccta
caggacatcacgctggacgatgtgaatgaaatcatcggcagagacatgtcccagtccccc
agcacccacggtcctccgtcagctcacaaccagtcatag
DBGET
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