Trematomus bernacchii (emerald rockcod): 117471399
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Entry
117471399 CDS
T09643
Symbol
psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A
KO
K03065
26S proteasome regulatory subunit T5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117471399 (psmc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tben03051
]
117471399 (psmc3)
Proteasome [BR:
tben03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117471399 (psmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
nSTAND3
RuvB_N
AAA_16
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
AAA_33
PhoH
CCDC22_CC
AAA_7
AAA_11
IstB_IS21
AAA_24
Golgin_A5
AAA_28
NPHP3_N
Sigma54_activat
ATPase
AAA_14
RNA_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
117471399
NCBI-ProteinID:
XP_033972261
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MASLSDKSVWDEVEDGIGEEVLKMSTDEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANVDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQAKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgagtgacaaatcagtttgggacgaagtcgaggatggaatcggcgaagaa
gtgttaaaaatgtccacagacgagatagttcagcggactcgtctcctcgacagtgagata
aagatcatgaagagcgaggtgctgcgtgtgacccacgaactgcaggctatgaaggataaa
atcaaggaaaacacggagaagataaaggtgaacaaaacgctgccgtaccttgtgtctaac
gtgatcgagctgctggatgtggaccccaacgaccaggaggaggacggggctaatgtggac
ctggactcccagaggaaaggaaaatgtgccgttattaaaacttccactcgacagacctac
ttcctgccggtgatcgggctggtggacgcggagaagctgaagcccggagacctggttggt
gtcaacaaggactcctacctgatcctggagacccttcctaccgagtatgactccagagtc
aaggccatggaggtggacgagcgccccacagagcagtacagcgacataggagggctggac
aagcagatccaggagctggtggaggccattgtcctgcccatgaaccacaaggagaagttt
gaaaacctgggcatccagccacccaaaggagtgctgatgtacggaccacctggtaccgga
aagaccctactggccagggcctgcgccgcccagaccaaagccactttcctgaagctggct
ggtccacagctggtccagatgttcatcggagatggagccaagctggtgagagatgccttc
gccctggctaaagagaaagccccatccatcatcttcatcgatgagctggacgccatcggt
accaagaggttcgacagcgagaaggccggagaccgagaggtgcagaggaccatgctggag
ctgctcaaccagctggatggattccagcccaacatgcaggtcaaggttattgctgccacc
aacagagtggacatcttggaccctgcgctgctccgttcaggacgtctggacagaaagatc
gagttccccatgccaaacgaagaggccagagctcgcatcatgcagattcattcacgcaag
atgaacgtcagccccgacgtcaactacgaggagctggctcgctgcaccgacgacttcaac
ggagcccaggccaaagcggtatgtgtggaggccggcatgatcgcgctgcgccgcggggcc
acagagctgaaccacgaggactacatggagggaatcctggaggtccaagccaagaagaag
gccaacctgcagtactacgcctga
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