Trematomus bernacchii (emerald rockcod): 117471411
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Entry
117471411 CDS
T09643
Symbol
chs1
Name
(RefSeq) chitin synthase 1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00520
Amino sugar and nucleotide sugar metabolism
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117471411 (chs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117471411 (chs1)
Enzymes [BR:
tben01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
117471411 (chs1)
Glycosyltransferases [BR:
tben01003
]
Polysaccharide
Structural polysaccharide
117471411 (chs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
117471411
NCBI-ProteinID:
XP_033972276
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MEELKFRGKKREGRHRETWDPFNLNPIGAEKESKRTCFRLAQNLAAVVVGLTVLASAIVS
KGSLLVLSTLSSPTSMRSPKEKQFYMLMLVFCLIFPNFLVFLKSLWRCAFKSFIRPKMKT
MAFICSIECLVSLGTSLLVLVVMPQFDVLTNLFISGGVCIVSAILQIVYRLQGDKWKILF
PICSLILTVTGYCLLGVDYYVRVSSFVDRQGTDCFVYVAIGIFSSLLISLCWWENPLQAT
NRMPEFLKDMDGYRDFVFVISSILRIIVIGGVYLLYHVLIEKSITWSDFNLQDADWELLQ
IGLVLFFLQAFCSAACHWFGVVACKIHAVRMSFALPVCCTGPAVLLLGIILFLTQAEQLD
GAKHGSITEFCEGLVYLSHKNTTPVVLLEITRSICRTSLNSYYLQWPFSMLALEGVCMWS
GFVTCTYYVWKIKVQRIERTSQLFVRRLYESAFIDLSLLLNTKMKVPRAKSQESQDDMQK
CVIYLCATMWHETYEEMLKILTSMFRLDRYRGDPNEEHNDCFDFECHIYVDDAYMNEKET
KKRLVNSYVTDLIHVVIEVYRVFTNKEADDVSIIETPYGGRLMFVMPEGNMLYIHLKDKD
LIRNKKRWSQIMYMYYLLGWKGYIVKNPQKLTRQNNPHRDSMISMNGEIFLLPQHDNDFK
RKFISDDNTYILALDGDTDFQPKAVILLVDRMRMYLNVGAACGRIHPTGMGPMVWYQKFE
YAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSAIMDDNVLKKYTKTSKRASEYVQYDQGED
RWLCTLLLQQGWRVEYNAASDAYTNSPEEFKEFYNQRRRWGPSTLANTLDLLHSGKETSK
RNSSISGLYIFYQMFTVGSSILGPASVTLMIAGAFQFVFQLAGTNSIMIACVPPVFYVII
CFTVKSNTQITIAAIMSVLYAFLMTASLFSIIGDMVIQGTFLTPTGLFLVSMTLMYAVTA
ILHPEEWGNIIYGLMYFICIPSGYLLLTIYSLVNMNNVSWGTRESNKGEGEVKKNRNMLC
DRNCKLCCWDMKIQVSQETENLMLRQITGQTAEQGSPLPITSHNAMAQQAADKAESEVEL
ITITTKEEAQKLNDAASSSSDDSFKKRSLTESASDKEDNEEDDDVMNAEPKELPIKDWVL
PVKQEFLKKLTYANLKTNLQQQIRYALPNISEEDVCEELVLMLIDTLNQQLGTVGPEDIL
SESQMEELQHALEEHARRILKTSRMEKLQKKVAIAIKKTLTAPQVRKLEEGEQDFWNKLI
DRYLTPINDSQEHKDEVTRELKSLRNKAVFLYFIINVLWVVATFFLQAIGNDVISIKIPK
YFPNGSASGEILKVEPLSLMFLLSFAVLLLVQFLAMLYHRVYTLIHVVSYRSSEKDYRQK
GIKDPELTEDEYCMTLENHSATGLTFTVDDL
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgaaattcagaggcaagaaaagagagggaagacacagggaaacatgggat
ccgttcaacctgaacccaataggagcggagaaggaaagtaagagaacatgtttcaggctg
gctcagaacctggcggctgtcgttgtggggctgaccgtcttggccagtgccattgtctca
aagggctctctcttggtgttgtccacactgtccagtccgacctccatgcgcagcccaaag
gagaaacagttctacatgctgatgttggttttctgcctgatcttccccaacttcctggtg
tttttgaagtcactgtggaggtgtgccttcaagagcttcatccggccaaaaatgaagacc
atggcatttatctgtagcattgagtgtctggtgtctcttggtacttccctcctggtgcta
gtagttatgcctcagtttgacgtgctgactaacctcttcatcagcggaggagtttgcatt
gtgtctgccattctgcagatagtatacagactgcagggagacaaatggaaaatcctgttc
ccaatctgctcgctcattctcacagttacaggttactgcctcctgggggtcgactactat
gttcgcgtgtcatcatttgtggatcgacagggcaccgactgctttgtgtacgttgccatt
gggattttctcttcactcctcatctccctctgctggtgggaaaatccactgcaagctact
aatcgcatgccggaattcttgaaagatatggatggatacagggactttgtgtttgtcatc
agcagtattctgaggataatagtgataggaggagtatacctgttgtaccatgtgctaatt
gagaaatccatcacctggtcggactttaatctgcaggatgcggactgggaattactgcaa
ataggactagtgttgtttttcttacaggccttctgctcagcggcctgccactggttcggt
gtggtggcctgtaagatccatgcggtcaggatgagcttcgcgctgccagtgtgctgcacg
ggacccgcagtgcttctgttgggaattatacttttcttaactcaggccgaacaactggac
ggggcaaagcacgggagcatcacagagttttgtgaaggcttggtctacttgagccataaa
aacacaacccctgtggttttactagaaatcacaaggagcatttgtcgaacttcactcaac
agctactacttgcaatggccattttcaatgctggcactggagggagtatgcatgtggtca
ggcttcgtcacatgcacctactatgtatggaagatcaaggtccagcgtatagagagaacc
tctcagctgtttgttcgtcgcctctatgaatctgctttcatcgacctgtctctgctactc
aacaccaagatgaaggtgccccgggccaagagccaagagagtcaagatgacatgcagaaa
tgcgtgatctatctttgtgccaccatgtggcacgagacctatgaagaaatgctgaaaatt
ctcacctccatgttcaggttggaccgctatcgaggtgatccaaatgaggaacacaacgat
tgttttgactttgagtgtcacatttatgtagacgatgcctacatgaatgagaaggagaca
aaaaagaggctggttaactcttatgtcactgacttgatccatgttgtcattgaggtgtat
agggtgtttaccaacaaagaagcagatgatgtgtcgatcattgagaccccctacggtggc
aggctgatgtttgttatgccagaaggaaacatgctctatattcatctaaaagacaaagat
ctaatcaggaacaagaaaagatggtcccagattatgtatatgtactatctactcggctgg
aagggctacatcgtcaagaaccctcagaagctcacacgccagaacaacccacacagagac
agtatgatctctatgaatggagagatttttctgctgcctcagcatgacaatgacttcaag
agaaaattcatctcagatgacaacacctacatcctggctctggacggggacacagacttc
caacccaaagctgtgattctgcttgtagacaggatgaggatgtatctcaatgtaggtgca
gcatgtggaagaatccatcctacaggaatgggtcccatggtgtggtaccagaagtttgag
tacgcagtgggccactggctgcagaagacagcagagcacgtgtttggctccgtgctgtgc
agtccaggatgtttcagtctgttcagaggatcggccataatggatgacaatgtattgaaa
aaatacacaaaaacatccaagagagcttcggaatatgtgcaatatgaccaaggagaggat
cgttggctgtgtactttgttactgcaacaagggtggcgtgttgaatacaatgctgcatca
gatgcttacaccaactcaccagaagagttcaaggagttttataaccagaggagacgatgg
ggaccatctacactggccaacacactggaccttctgcacagtggtaaggagacatcgaaa
agaaactcatccatctccgggctttacatcttctaccagatgttcacggtcggttcctcc
atccttggtccagcctctgtgactctcatgatagcaggtgcttttcaatttgtcttccaa
cttgccggtacaaattccatcatgatcgcatgcgttcctccagtgttctacgtcatcatc
tgctttacagtcaagtcaaatacccaaatcaccatcgctgccatcatgagtgtgctgtat
gcgttcctcatgactgcatccttgttttctataatcggtgacatggtgattcagggcacc
ttcctgaccccgactggcctgtttttggtttctatgacactcatgtatgcagtgacagct
atactacacccagaggagtgggggaatattatctacggtctgatgtatttcatctgcatc
cccagtggatatctccttctgaccatctactcactggttaacatgaacaacgtgtcctgg
ggcacaagggaatccaacaagggagaaggagaagtgaagaagaaccgtaacatgctgtgt
gacagaaactgcaaactctgctgttgggacatgaagatacaggtatcacaggaaacagag
aatctgatgcttcgtcagatcacaggccagactgcagagcaaggctctcctcttcccatc
accagccacaacgcaatggctcaacaggccgctgacaaggctgaatctgaggtggaactc
atcaccatcacaaccaaagaagaagctcaaaagctcaacgacgctgcttccagcagcagt
gatgacagtttcaaaaaaaggagcctaacagagagtgcatccgacaaagaggataatgag
gaagatgatgacgtaatgaatgctgaaccaaaggagctcccaatcaaagactgggtattg
ccggtaaaacaggagtttttgaagaaactgacatatgccaacctgaagacaaatctacaa
caacaaatacgatatgcgctccctaacataagtgaagaagatgtgtgtgaagagctggtc
cttatgttaatagatacactcaatcaacagcttggtacagtggggcctgaagatattctg
tcagaaagccagatggaggagttacaacacgcactggaagagcatgctcggcgtatcctt
aaaaccagtagaatggagaaattgcagaagaaagttgccattgccatcaagaaaaccctc
actgcaccgcaagtgcggaaacttgaagagggtgagcaggacttctggaacaagttgatt
gatcgctacttgacgcctattaatgattctcaagaacataaggatgaggtcaccagagaa
ctcaagtcactacgcaacaaggcagtcttcctgtatttcatcatcaacgtgctgtgggtc
gtagctaccttcttcctacaggccattggaaatgatgtaatcagcatcaagatccctaaa
tactttccgaacgggtctgcatctggagagatcctcaaggtggagcctctcagtttgatg
ttcctgttgtcttttgctgttcttctcttggtccagtttttggccatgttatatcacaga
gtctacactctgatccatgtggtgtcctatcgcagctcagagaaagactacagacagaag
gggatcaaagacccggagcttaccgaggatgaatattgcatgactctggagaaccactcc
gccacgggactcacctttactgttgatgatctgtag
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