Trematomus bernacchii (emerald rockcod): 117471427
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Entry
117471427 CDS
T09643
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117471427 (usp8)
04137 Mitophagy - animal
117471427 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117471427 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117471427 (usp8)
04121 Ubiquitin system [BR:
tben04121
]
117471427 (usp8)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117471427 (usp8)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117471427 (usp8)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Others
Others
117471427 (usp8)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117471427 (usp8)
BRITE hierarchy
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Motif
Other DBs
NCBI-GeneID:
117471427
NCBI-ProteinID:
XP_033972314
EnsemblRapid:
ENSTBNG00005017147
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MPAVSNGLRELYLSTSLGELNKKAEIKPDKTSTRNYVQSACKIFKAAEECRLDRDEEKAY
VLYMKYLTVYDIIKKRPDFKQQPDYYMTMLGPNSFKKAIEAAEKLSESLKLRYEEVEVRK
KLEEKERQEEKKRREEMKEKDSGRGAPKVSSANKKDSKKIKGEQNELKTELKNTPSKAAV
PAGGISAEKLFHMMEDQTITIIVMDARSLRDFEESRIQVPGQTCISVPEEAVSPGIIVTQ
IEGKLPDASKEHWKRRGFVDYIVLLDWFSSVTDLKLGTTLQSLKDALFKWDSITILRSEP
LVLEGGYENWLLFYPMFTSNAKVHPPRPNIISSHPQLNFSYPSLEEPKPVTPPQPEPEVT
PEPQEASAPVLVNGVAPAEPPTSKTSEVTDGPPDSLESTVTGSTNSGLDVSKKGPAAGAS
IQTPANKAFPQFDRTKKPSVCVTDEPKPGQNGSMQNGPNMPDRSVKPSITPNNSLSKEEQ
SQIHSEAVAGMEKAKQEQEKRNQERRAEGERREKEEKERFEREQSEKRKKDEQENGPQEK
NKLERQKAEEDDKENRVWDDKERRGKEQNSEPPSKSMSLDSPAPNHIVSEIKREPLTRAR
SEEMGRSVPGLPIGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKQKP
PRPAEPDSTQDQDREQSKLKRSYSSPDIAQDLRDEVQKKTATPPTAAVTPTINRETKPAT
KVYSKVEIARPSAAKIRNLNPSFGGLGPSLTGLRNMGNTCYMNSILQCLCNTPAMAEYFN
NNYYLEDINRYNILGHKGEVAEEFGVIMKALWSGLYKSISPRDFKVTIGKINDQFACYDQ
QDSQELLLFLMDGLHEDLNKADNRKRYKEEDNDHMDDQAAADLAWSKHKLLNESIIVALF
QGQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCR
HCKAHRDSTKKLEIWKVPPIVLVHLKRFSYEGRWKQKLQTSVDFPLETLDLFQYVIGPKT
NLKRYSLYGVSNHYGGLDGGHYTAYCKNGPKQRWYKFDDHEVMEISTPSVKSSAAYILFY
STL
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtttccaacgggctcagagagctgtatctgtccacttctctgggggaactc
aacaaaaaggctgaaattaagccggacaagacaagcacccggaactatgttcagagtgcc
tgcaaaatcttcaaggcggcagaggagtgtcgtctggacagagacgaggagaaagcttat
gtgctgtacatgaagtatttaactgtatatgacatcatcaagaaaagaccagacttcaag
cagcaaccggattattacatgaccatgcttgggccaaacagctttaagaaagccatcgaa
gccgcagagaaactctctgaaagccttaaactcaggtatgaggaagttgaggttcgaaaa
aaacttgaggagaaggagagacaagaggagaagaaaaggagggaggaaatgaaagagaaa
gatagcggtcgaggtgctccaaaagtgtcttcagcaaacaagaaggacagcaaaaagata
aaaggagaacagaatgaactgaagactgaactaaagaatacaccctccaaagctgcagtg
ccagctggtggcatctcagctgagaaacttttccacatgatggaggaccagacaattaca
ataattgttatggatgcgcgcagcctcagggactttgaggagtctcgcattcaggtcccg
ggccagacgtgcattagcgtgccggaggaggccgtcagcccaggaatcattgtgactcag
attgaggggaagctgccagatgcgtctaaagagcattggaagcggaggggatttgtggat
tatatagtgctgctggactggttcagttctgtcactgaccttaaactgggcaccaccttg
cagagcctcaaagacgccctctttaaatgggacagcatcacaatcctgcgtagtgagccg
ctggtgctggagggaggctacgagaactggctgttgttttaccccatgttcacatccaac
gctaaagtccaccctcctcgaccgaatatcatcagctcccacccccagttgaactttagc
tacccatccctagaggaaccaaagcctgtgaccccacctcaaccagagcccgaggtgaca
cccgagcctcaggaggcctccgctcctgtgctggtgaacggggttgcaccagcagaaccc
cccacatcaaaaacctccgaggttactgacgggccgccagactctctggagtccaccgtc
accggctcgaccaattctgggctagacgttagtaagaagggccctgcagcaggtgcatcc
attcagacgcctgcaaacaaagctttcccacagtttgaccgtaccaagaaaccctctgtc
tgtgttaccgacgagccaaagcccggccagaacggatccatgcagaacggcccaaatatg
cccgaccgctctgtcaaaccatccatcacccccaacaattcactgtctaaagaagaacag
agccagatacactctgaggctgtagcagggatggagaaggcaaagcaagagcaggagaaa
cgaaaccaggagcgtcgtgcagagggtgagagacgggagaaggaggagaaggaaaggttt
gaaagggagcaaagtgagaagaggaagaaggacgagcaggagaatggacctcaggagaaa
aataaactggaacggcagaaggcagaagaagacgataaagagaacagggtgtgggacgac
aaagagaggaggggaaaggagcagaactctgaacctccctccaagagtatgtccctggac
tctcctgctcccaatcatatcgtaagtgaaattaagagggagcccctgacccgagcaaga
agtgaggagatgggaaggagtgtcccaggccttccaattggttggatgaagttcctggac
acggtgacagggacctacagatactaccattccccgaccaaccgtgtccacctgtacccg
ccggaggtcactgttccccagacccccccctccacgccgccaacagttaaacagaaaccc
ccgcggcccgctgagccagactctacccaggaccaggaccgggagcagtctaaactgaaa
cgttcctactcctccccggatatcgcccaggacctgagagacgaggtccagaagaaaacc
gccaccccccccaccgctgctgtcacacccaccatcaacagagagaccaagcctgccact
aaagtctattctaaagtggagatcgcacggccgtcggctgccaaaattcgcaacctcaac
ccttcttttggaggtctgggtccatcgctgacgggcctccgcaacatgggcaacacatgc
tacatgaactccatcctgcaatgtctgtgtaacactcctgccatggccgagtacttcaac
aacaattactacctggaggacatcaacaggtacaacatccttggccataagggcgaggtg
gcggaggagtttggagtgatcatgaaggcgctgtggagcggtctgtacaagagcatcagc
ccgcgggactttaaggtcaccataggcaagatcaatgaccagtttgcttgctatgaccag
caagactcccaggagctgctgctgttcctcatggacgggctccacgaggacctcaacaag
gcggacaacaggaagcggtacaaagaggaggataacgaccatatggatgatcaggcagca
gccgacctggcctggagcaaacacaagctgctgaacgagtccatcatcgtggctctgttc
cagggtcagttcaagtccaccgtgcagtgtctgacctgccaccgcaagtcacggaccttt
gagaccttcatgtacctgtcgctgcctctggcctccaccagcaagtgctccctgcaggat
tgtctgaggctgttctccaaggaagagaagctgacggacaacaacaaggtgttctgccga
cactgcaaagcccacagagactccaccaagaagctggagatctggaaggtcccgcccatt
gtcctggtgcacctaaagcgattctcctatgagggcagatggaagcagaagctacagacg
tctgtagatttccctctagaaactctggacctgttccagtacgtcattggacccaaaacc
aacctgaagagatacagcctgtatggggtttctaaccactacgggggtttagacggcggc
cattacacagcctactgtaagaacggccccaaacagcgctggtacaagtttgatgaccac
gaggtgatggaaatctccaccccctccgtcaagtcctccgcagcctacatcctgttttac
tccaccctgtga
DBGET
integrated database retrieval system
