Trematomus bernacchii (emerald rockcod): 117471431
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Entry
117471431 CDS
T09643
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03272
Virion - Hepatitis viruses
tben03273
Virion - Lassa virus and SFTS virus
tben04140
Autophagy - animal
tben04142
Lysosome
tben04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117471431 (lamp1a)
03272 Virion - Hepatitis viruses
117471431 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117471431 (lamp1a)
04142 Lysosome
117471431 (lamp1a)
04140 Autophagy - animal
117471431 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117471431 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117471431 (lamp1a)
04090 CD molecules [BR:
tben04090
]
117471431 (lamp1a)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117471431 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
117471431 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
117471431 (lamp1a)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117471431 (lamp1a)
CD molecules [BR:
tben04090
]
Proteins
117471431 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
117471431
NCBI-ProteinID:
XP_033972321
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MKVYYSSAALIIAWLAVLGCIQAVTLEVKEGNSTCIKAELSASFSVTYNTSSSTRTLQFP
LPDSTTVDTASSSCGTEESSPWLVAVFGPGHALGLSFSTNGSLYSVANLTLQYNLSDTST
FPDANSSGVITVVSASVGISATLNTTYHCVSPSTFALGGATVTFSDMRLEAYMPGNELSP
TESICMADPTSTTAPPTTAGTTTTAAPAPTPIPTPPGTPERGTYSVNNGNGTLCLMAQMG
LQLNFTYFSRSQNKTVQELLNLTPNLTTSSGSCEASSASLVLTQGQITTLNFTFTLNSTS
KKYHLSGITLLADMADATALISASNSSLDYLRSTLGRSYMCNAEQTLAVVPSFSLNTFRL
QVQPFQVTTDQF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctattactcttccgccgcgcttatcatcgcctggcttgcggttttaggttgc
attcaggctgttacccttgaagtgaaggaagggaactccacctgcattaaggctgagctc
tctgcatccttctccgtcacatacaacacctccagcagcacaagaaccttgcagttccct
cttcccgactctaccacggtggatacagccagcagctcctgtggcacagaggaaagctcc
ccgtggctggtggccgtgttcgggcccggccacgcgctcgggctgagcttttcgaccaat
gggagcctgtacagtgtggctaacctgacgctgcagtacaacctcagcgacacttctacc
tttcctgatgccaacagctcaggtgtaatcactgtggtgtcagcttcagttgggatctcg
gcgacgctcaacaccacctaccactgtgtgagcccctccacttttgcattaggtggagcg
actgtcactttctctgacatgaggctggaggcgtacatgccaggaaacgagctgagtcca
acagaaagcatatgcatggcagatccgaccagcactacagctccacctaccactgccgga
acaacaacaaccgcagctccagcccccacccccatccccacccccccaggaacacctgag
cgaggcacctactctgtgaacaacggcaacggcactctgtgtctcatggcccaaatggga
ctgcagctcaacttcacctatttctctcgttctcagaataagactgtccaggaattatta
aacctgactcccaatctgacaacttcatcaggctcatgtgaagccagcagtgcttccttg
gttttgacacaggggcaaatcaccacgctcaacttcacctttactctgaactccacaagc
aaaaagtaccacctgagtggaataaccctgctggctgacatggctgatgccactgctctc
atctctgccagtaacagcagtctggactacctgcgcagcaccctgggacgctcctacatg
tgcaacgcagagcagactctggctgtggtgccaagcttttctctcaacacattcagactg
caggtccagccatttcaagtcaccactgaccagttttga
DBGET
integrated database retrieval system
