Trematomus bernacchii (emerald rockcod): 117471434
Help
Entry
117471434 CDS
T09643
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117471434 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117471434 (dmxl2)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117471434 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117471434 (dmxl2)
RAVE complex
117471434 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
WD40_RFWD3
VPS11_N
Motif
Other DBs
NCBI-GeneID:
117471434
NCBI-ProteinID:
XP_033972330
LinkDB
All DBs
Position
Unknown
AA seq
3062 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFECVQIIPGAQNGNIQV
GCVECSLQLGRIAASYGNTVCIFEPLSTNPNKRHKQLNYQWQKTGQFFLEAITYNLAWDP
QGNRILAATERLQLWAPPLKDALIEEEDGQLNDDRPHPVLNDWNCVWQCKTAASVHIAKW
STDGEYFATVGKDDCLLKVWYPTTGWRSAVVAQDHSDKKPPPVHFSFVYLAHPRMVTGMS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSMLGGQISENTHSFSSSLPGLAG
NKDKIQHALESIHHLKHLRRGRRRSSALVAHSEVLPSQLGTQDAHSHRHIAHHANALCHF
HISASINPITDIPAVLAESAVFNPDDGSGGGGFVVHWLNNKDLSFTASMDLFMLQLRKLS
EQQLDQTTDDPLDPEGSPMKFDFDLDEMSDKASSEQGEEGETGEQGSTKASSPGSSSSMP
LPSMLLERKMETLITEWNKSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTMSEGESSSEPGRMVQRVPHSASLSGALGSSTLASNPN
PCPGISPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHKFRYCGHRFHLNDQACHTV
LPLLLTSSHHNALLTPPSAPGSLEEEQPPTFPTPKGLSSRKQLRNAATRTFHDPNAIYSE
LILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGSYCNSASACFVA
SDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCG
SNTQLLHVFQEDFILGYKPQKETEDFTPAFPSGEDYQPAPFSEKFFLVVIEKDLNRNSVL
QMWHLHLKSVQACVDEASPDFSFQSQLMVPNQSLNPDSSPETSPIRPLPRSSSTANLQSA
SKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRFW
RCAVEGDEGYSEDDQDTRTYRWEPWALMNEEEDNNSAVCVPGRPVAVSCSYIGRLAMAFK
KPRPGQLQGSGQDFSMHVSIYECESTGGSEWVLEQTLHLDDFTRPCSTLDPRVSVDSNLF
VYSRSDLYMTRDHSSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNEPPSS
KEGVAVITLPLGGSIKQGIRSRWILLRSVDLLSSVDGTPSLPVSLSWVRDGILVVGMDCE
MHVYAQWHQDKKAGDGEEGNLSSADIAGGQNTTSSVFEGRARSKSVFEGSAAGAAAVDEA
LRAPAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAV
VRDVEAGEGGSRRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYSLMLADLD
TSYKGAEEAAKGGDGEGSQKSAGDQYSDLFQMQAVTTDDFVNFATDKPEKKSRVINLSQY
GPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTDQKYTGGEA
LDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEEQLNMIPAMQ
RGDPQWSELRAVGAGWWIRNINTLRKMVEKIGKAAFQRNNDPLDAALFFLAMKKKAVLWG
LFRSQHDDKMTQFFKNNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVL
MEKMEDIQLAMIVARLYEADFENSSTCQGLLHEKVLGCNRDGSGYHCSRLHPDPFLRSIA
YWIMKDYTRALDTLLERTPKEDDENPDVMVKACNPVVFSFYNYLRTHPLIIRRHLAIPDG
TAVTVGLSAEKSSAIEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSGSSPQ
SKASSKANVNSTQPLENGTQGGVDWGSPAPPADAWGGNESAGGLDWNQPLVKMDEDDLKL
DWGADKEDDEDEDDDGLTMKKPEAETKAVEGSESGDPKLQRADSQGESEVDVIAEQLKFR
ACLKILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHTICNYKVEGKEEELDVERWR
ERTASVDIPDDTIDRTEAGAYERHQVERHRLQAKQQHSERRKAWLRKNQALLRVFLSYCS
LHGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIATTKTVIANPV
LHLSNHIHDILHTVNLLETPPHPDIIDDRVNTLHTLAASLSACIYQALCDSHSYSSQSEA
NQFTGMVYQGLLLSERKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREEGQPRLNV
LLCEGVMAVYLALLIHGLGTHSSNELFRLAAHPLNNRMWAAVFGGGAKLVIKPKRPEAPP
VAPPQPAAEDGDRYRRRFNMRMLVPGRPVKETPATPPPVPTERPAYREKFIPPELSMWDY
FVAKPFLPLSDSNALCDSDESGAEDDDEDDDDAFLSDTQMTEHSDPNSYSWALIRLVMVK
LAHHNVKNFLPLTGLDFTDLPVTSPLSNAVLKTLENWEQLLLERMNKFDAPPPNYINTFP
TDLSAGGGPAILRHKAMLEPDNTPFKTKNHQSFPARRLWHFLVKQEVLQETLIRYIFTKK
RKQSESVENHMDRISPNCIAGASSPYKVEADLGYPGGKAKIIHKESDIIMAFAINRANSN
EIVLASTHDVQEVDVSSLLAVQPYTWIGDDFDKESRSSDDIDHRSSQTNISQPSSVPFAP
PQMQISASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNR
PQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYVSWQCHTKT
CGDFAFVTSSSLIATAGQSSDNRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAAKQQL
LITGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDAFEDFFVTGSAEGNMKVWKLSGN
GLMHSFSTEHTKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPSSLVD
IL
NT seq
9189 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtgctgacgggggctgttaaccctggagattgctgctattcggtg
ggaagcgtgaatgacatacctttcacggcctatggctcaggttgtgatgtagtgatcttg
gccagtgactttgagtgcgtgcagatcatcccgggagctcagaatgggaacatacaggtg
ggctgtgtggagtgctccctccagcttggcaggattgctgcatcctacggaaacacagtc
tgcatctttgagcctctttctaccaacccaaacaaacgacacaagcagcttaactatcag
tggcaaaagacaggacagttcttcctcgaggccatcacctacaacctggcctgggacccc
caagggaaccgtatcctagcagcaactgagcggctccagctgtgggctcctccactgaaa
gatgccctgatagaggaggaggatggacagttaaatgatgacaggccccaccctgtgctc
aatgactggaactgtgtctggcagtgcaagactgctgcatctgttcacattgccaagtgg
tctactgatggggagtactttgcaacagttgggaaggatgactgtttacttaaagtgtgg
tatcccaccacgggctggcgttctgcagtggtggctcaagaccactcggataaaaaacct
ccccctgttcacttctcctttgtttacctggcacatccccgcatggtcaccggcatgtcc
tggaggaagaccagcaagtacatgcccaagggttcagtgtgcaatgtgctgctgacatcc
tgtgaggatggcgtgtgtaggctgtggtctgagacgctgctaccagaagacagcatgctt
ggcgggcagatctctgagaacacacactccttcagctccagcctgccaggcctggcaggc
aacaaggacaaaatccagcatgctttggagtcgatccaccacctgaagcacctgcggcgc
ggccggcgacggtcctctgctctggtggctcacagtgaggtgctgccctctcagctcggc
acgcaggacgcacacagccaccgccacatcgctcatcacgccaatgccctgtgtcacttc
catatctcagccagtattaacccaatcacagatatcccagcagtgctggctgaatctgca
gtgtttaacccagacgatggtagtggtggtggaggctttgtcgttcactggctcaacaat
aaggacctcagcttcaccgcctccatggacctctttatgctgcagctccgtaagttatct
gaacagcagctggaccagactactgatgaccccctggaccccgaaggatcccctatgaag
tttgactttgacctggacgagatgtctgacaaagcgtcctcagagcagggggaggagggg
gagacaggggagcaggggagcaccaaggcgtcctcccccggatccagctccagcatgcct
ttgccctccatgctgctggagaggaagatggagactctgatcacagagtggaacaagagc
ccagacatgttgttcaccatccaccctactgatggatctttcctggtttggcatgtgaag
tacttggatgaattcaaccagggcatcttcagacaggttcaggtatccttttcctcccgt
attccagtggcatttcctacaggtgatgccaactcactgagtaaaaacatcctgatgtac
gcctgcactatgagtgagggggagagttccagtgagccggggaggatggttcaacgtgtc
ccccactctgcttccttatcgggcgccctgggatcatccacgctggcctccaatcccaac
ccctgccctggtatcagtcctgcggtcatgatggtctccaagcatgtggatggatctctc
aatcagtgggcagtgacatttgctgagcgctctgccttctccaacgtactgaccgtatca
cacaagttccggtactgcgggcaccgcttccatctgaacgaccaagcctgccacacagtg
ctgcccctgctgctgacctcctctcaccacaacgccctgctcacccccccctcagcccct
ggcagcctggaggaggagcagcctcccacctttccaacaccaaagggactttccagcagg
aagcagcttcgtaatgcagctacaaggaccttccatgatcccaacgccatctacagtgag
cttatcctgtggagggtggaccacattggacccctgtcctgcactggaggggtctctgaa
ctggcccgtatcaactctctgcacacctctgcgtttagcaatgttgcttggctaccgaca
cttgtgcccagctctgtacttggatcttactgcaacagtgccagcgcctgcttcgtggca
tcggatggtaaaaacctgcgtctctatcaagctgtggtggatgccagaaaacttctggat
gagctgtcagaccctgaaacgtctaaactggtgggcgaagtgttcaacattgtcagccag
cagtccactgccaggcctggctgtatcatcgagttagacgtcatcacaaaccagtgtggc
tccaacactcagctgctgcatgtctttcaagaggacttcattttaggttacaagcctcag
aaagagacagaagatttcacaccggcctttccatctggtgaagattaccaacctgcccca
ttctctgagaagttcttcctggtggtgatagaaaaggatctcaacaggaactcagtcctg
cagatgtggcacctgcacctcaagtctgtgcaggcctgtgttgatgaggcaagcccagat
ttcagcttccagagccagctgatggttcccaatcaaagtttgaatcctgactcgtctccg
gagacctcacctatcagacccctgcctcgctcatcctctacagccaacttgcaatcagcc
agcaaactcatcctgagctccaagctggtgtacagcaagcggctcgaccttccccacggg
gtggaggttaccagggcgaccccctctgcaggtcatctgagttcctcttctatctaccct
gtatgcctggctccgtacctgattgtcaccacctgctctgactctcgggtgcgattctgg
cgctgtgctgtggagggggatgaggggtacagcgaggatgaccaggacacccgtacgtac
cgctgggagccctgggctctgatgaacgaggaggaagacaacaacagtgctgtgtgcgtt
cctgggcgtcctgttgctgtgtcctgctcctacatcggcaggctggccatggcctttaaa
aagccacgaccaggacagctgcagggttctgggcaggacttctccatgcacgtgtccatc
tatgagtgtgaatctactggaggctcagagtgggttttagagcaaactctccacctggat
gactttaccagaccctgttcaaccctggatccaagagtcagtgtggactccaacctcttt
gtctacagcaggtctgacctgtacatgaccagagaccacagctcccccaacattaagcat
tacgtacacttggactggctctcaaaggaggacggatctcacatccttactgtgggcgtt
ggatccaacattctcatgtacggccgtatctctggcgtcgtcaatgagccgcctagcagc
aaggaaggagtagctgtcatcacccttcctctagggggcagtatcaagcagggcatccgc
tcacgctggatcctgcttcggtctgtggacctcttgtcctccgtggacggcacaccgtct
ctgccagtctccctgtcctgggtgagggacggcatcctggtggtgggcatggactgtgag
atgcacgtgtacgcccagtggcaccaggacaagaaggctggggatggagaggagggcaac
ctatcatctgcagacattgccggtggtcaaaacacaacctcctcggtctttgaagggaga
gccagatctaagagtgtgtttgaagggagtgccgcaggagctgctgcagtggatgaggcc
cttcgtgccccagcaggacttcaggaggggggactgtttgaagcagctcactccctttct
cccactctaccccagtaccatcccacccagctgctggagctcatggacctgggcaaggtt
cgccgtgccaaggccatcctcgctcacctggtgaagtgcattgctggggaagtggcagtg
gtgagggatgtggaggcaggtgagggcggatccaggagacatctgtcccggaccatcagt
gtgaccggcagcacagccaaagacaccatagtggctggccgtgatggggggagggactac
acagagatcaactccatcccccccttgcccctctactccctcatgttggctgacctggac
acctcgtacaagggagcggaagaagctgctaaggggggcgacggtgaggggtcccagaag
tccgcaggagaccaatattcagacctctttcagatgcaagcggtcaccacagatgatttc
gtgaactttgccaccgacaaaccagagaaaaagtctcgagttatcaacctctctcaatat
ggacctacctactttggaccggagcatgctcaggtattgtccagtcacctcatgcactcc
agcctcccgggactcaccagactggagcagatgttcctggtggccttggctgatactgtt
gcaaccaccagtgctgaggtcaccagctccaccgatcagaagtacacaggtggcgaggct
ctcgatgagtgtggactgcggtacctgctggccatgcgtcttcacacctgcctgctcacc
tccctgcccccgctctaccgcatgcagctgctccaccagggcctgtcaacatgccacttt
gcatgggccttccactcagaggcggaagaagagcagctgaacatgatcccagccatgcag
agaggagaccctcagtggtctgagctcagagctgttggagcggggtggtggatacgcaac
attaacacccttcggaaaatggtggaaaagataggtaaagctgcattccagagaaacaac
gaccctttagatgctgctctgttcttcttggccatgaagaaaaaagctgtcctctggggg
ctcttcaggtctcagcatgatgacaagatgactcagttcttcaagaacaacttcagtgaa
gaccgctggcgaaaggcagcactgaaaaatgctttctccctgttgggaaagcagcgcttt
gaacagtccgctgcctttttcctactggctggatcactgaaagacgctatagaggtgttg
atggagaagatggaggatatccagttagccatgatcgtagcaaggctgtatgaggctgac
tttgagaattcctccacctgccaaggcctcctgcatgagaaggtcctgggctgtaacagg
gacggtagtgggtaccactgttccaggctgcaccccgacccattcctccgcagcatagcc
tactggatcatgaaagattacacgcgagcgctggacacactgttggaacgaacccccaaa
gaggatgatgagaaccctgatgtgatggtgaaagcttgcaacccggtggtgtttagtttc
tataactacctgaggacacaccctttgatcatccgtcgacacttagcaattccagatggc
accgcagtgactgtgggcctcagtgctgagaagagcagcgcaattgagatcaaccttata
gagcgcaaactgttcttcactactgccaacgcacacttcaaggtgggctgtccagttctg
gctctggaagtgctttccaagattcccaaagttactaagaaatctggctcttcgcctcaa
agcaaagcttcatccaaagccaacgtaaactccacccaacctctggagaatgggacccag
ggaggcgtggactggggctcccctgcgcccccggccgatgcctgggggggaaatgagagt
gcaggtgggttagactggaaccagcctttggtcaagatggatgaagatgacctgaagctg
gactggggggcggacaaggaagatgatgaagatgaggatgatgacggtttgaccatgaag
aagcctgaggctgagactaaagcggtcgaaggctcagagagtggggaccccaaactgcag
agagcggactcacagggggagtcggaggtggacgtgatagcggagcagctgaagttccgg
gcctgtctgaagatcctgatgacagagctgcgtacgctggccacaggcttcgaggtggat
ggagggaagctccgctttcagctctacagttggctggagaaggagatagcagccatgcat
acgatctgcaactataaggtggagggcaaggaggaagagttagatgtggagcgctggaga
gagcgaacagcatcagtggacataccagacgacaccatagatcgtacagaggccggggcc
tacgagcgtcaccaggtggagcgccaccgccttcaggccaagcagcagcactctgagagg
cgtaaagcgtggctgaggaagaaccaggccctgctgagggtgtttctctcctactgtagc
cttcatggagccaagggaggaggagtcacctctgttcgcatggagcttctcttccttctg
caggagagccagcaggagaccacagtgaagcagctgcagtctcctctgcctctgcccact
acactgcctctgctctcagcctgcattgctaccaccaagacggtcatagccaatccagtt
ctccacctcagcaaccacattcacgacatcctccacaccgtcaacctcttggagaccccg
ccgcatcctgacatcatagatgatcgggtgaatactttgcacacgttagcagcttctctg
tctgcctgcatctatcaagcactgtgtgacagccacagctacagcagccagtcggaggcc
aaccagtttacagggatggtgtaccagggcctgttgctcagtgagaggaagcgactccgc
acagaaagcattgaagaacatgtgactcccaactctgctcctgcacagtggccaggtgtg
tcgtccctgatttctctgttgacgtctgccagagaggagggccagccgcggctcaacgtg
ctgctgtgtgaaggggtcatggctgtctatctggcactgctcatccacggcctgggcact
cacagcagcaatgaactgttccgcctggcagcacacccgctcaacaaccgcatgtgggct
gctgtgtttgggggaggggccaaactcgttattaagccaaagaggcccgaggccccacca
gtagctccccctcagcccgcagcggaggatggggaccgatacagacgtaggttcaacatg
aggatgctcgttcctgggcgccctgtgaaggagacgccagcgaccccccctcctgtgccc
acagagagacccgcctacagggagaagttcattccgcccgagctgagcatgtgggactac
tttgtggccaagcccttcctgccgctgtcagacagcaacgctctttgtgactcagacgaa
agcggcgcagaagacgacgatgaagatgatgacgacgcatttctttctgacactcagatg
acagagcactctgaccctaactcctacagctgggctctgatccgcctggtgatggtgaag
ctggctcatcataacgtcaagaacttcctcccactcacaggcctcgacttcacagacctg
ccggtcacctcccctctcagcaacgctgtgttgaagactttggagaattgggagcagcta
ctgctggagcgaatgaacaagtttgacgccccgcctcccaactacatcaacactttccct
actgacctcagtgcaggagggggccccgccatactccgacacaaggccatgctggaacca
gacaacacacccttcaagacaaagaaccatcagtcctttccagctcgacgtctttggcac
ttcctggtcaaacaggaagttcttcaggagactttgatccgttacatcttcactaagaaa
aggaagcagagtgagtctgtagagaaccatatggaccgtataagccccaactgcattgca
ggagctagcagtccctataaggtggaggcagatctgggctaccctggaggaaaggctaaa
atcattcataaggagtcagatataatcatggcattcgccatcaatagggctaactccaac
gagatcgtgctagcctccactcatgacgtccaggaggtggatgtgtccagtctgctggct
gtgcagccctacacctggataggggacgactttgataaggagtcccgcagctctgacgac
atagaccatcgatcttctcaaaccaacatttcccagccgagctccgtccccttcgctccc
cctcagatgcagatttctgcatccatgccatggctcggcagtggacagaccagcatggga
gccagtgtgattatgaagaggaatctaaacaatgtgaagagaatgacatcccatcccata
tatcagtattacatgacaggggctcaggacggcagtgtaagaatgtttgaatggaaccga
cctcagcagctcatttgcttcagacaagcaggcaacgctagagtcacccggctctatttc
aactcccagggcaataagtgtggagttgctgatggagagggcttcctcagtctgtggcag
gtcaaccagacatcctccaaccccaaaccctacgtgagttggcagtgccacactaagacg
tgcggtgattttgccttcgtcacgtcctccagcctcatcgccacagctggacagtccagt
gataacagaaatgtttgcctgtgggatactctgatttcacctagcaataccatggtccat
gcgttcccctgccatgagaacggagccactgttctgcagtatgctgctaaacagcagctg
ctcatcactggaggcagaaagggctttgtgtgcgtgtttgacatccgccagaggcagctg
ctccacactttccaggcccatgactcagccatcaaagccctcgctctggatgccttcgag
gacttcttcgtcactggctccgcagagggcaacatgaaggtgtggaagttatccggcaac
ggcctcatgcactcttttagcaccgaacataccaagcagtccatcttccgcaacatcggt
gccggtgtcatgcaggtggaaacgcgccccggtaaccgcatcttcacctgtggagcagat
ggcaccctgaagatgagggtcctccctgaccgctacaatatccccagcagcttggtcgac
atcctgtaa
DBGET
integrated database retrieval system
