Trematomus bernacchii (emerald rockcod): 117471480
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Entry
117471480 CDS
T09643
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1-like
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117471480
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117471480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
MYO6_lever
IQ
EGF1_RECK
Motif
Other DBs
NCBI-GeneID:
117471480
NCBI-ProteinID:
XP_033972427
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MQKGMRLNDGHITYLALLAKKDGTRRGCLSKKSSDNTKWHSKWFALLQNMLFYFENDSSS
RPSGLYLLEGCVCDRAPSPKPSLSAKECLEKQYYFTVTFNHDNQKSLELRSEDVKDCDEW
VAAITQASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIAG
LLKDNEKIQSNPEVPPSEDDLEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEVLLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHITKNGVSSLIDCTLMEEPEGTDDETKVER
SGMDTENLDFKVMVEPKDVQPYTVILVASSRQEKSAWTSDICQCIDNIRCNGLMMNAFEE
NSKVTVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTSADVVLEKLITIYKKPISAIPARSLELFFASSQSNKLLYGEPPTSPRAS
RKFSSPPPLAITKTSSPNRRRKLSLNIPIITGGKALDLAALNCSPNGYASMHSTMSPFSK
TTLDINKLYVSSTKASKIPDEGETKAEGKAEETVLNKQDLSVREECNEDPSQSEETEAEM
SPPKSPSTPKNVKSKNSEFSLFSFNNGMVVSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFELNTELKT
RVISFLEEVIHDPELLTQERKAAANIIRTLTQEDPGDNQVTLEEITQMAQEDCKTEPFES
HSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNDISNKIATE
ILQWDDVNLRAAVIEKWVAVADICRCLHNYNAMLEITSSLNRSSVFRLKKTWLKVSKQTK
TVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDSLVNFS
KMRMISHIIREIRQFQQTAYKIDYQPKVAKYLLDSSTTLDEESLYDASLRIEPKTST
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagggatgagactcaatgacggccacatcacctatctggctcttttggctaag
aaggatgggacgaggcgaggttgcctgagtaagaaaagctcagacaacacaaaatggcat
tcaaagtggttcgctttgttgcagaacatgttattttatttcgagaacgactccagctca
cgcccctccggactgtacctgttggagggatgtgtgtgtgacagggcaccgtcacccaaa
ccatctctctccgcgaaggaatgcttagagaagcagtactactttaccgtcacgttcaat
catgacaaccagaagtctttggagctgcgctcggaggacgtcaaggactgtgatgagtgg
gtggcagccatcacacaggccagttacaggaacctggctacagagcatgagaccctcatg
cagaagtatctccatctactccaaatagtggagacggagaaaacggttgccaagcaactt
cgacaacagatagaggatggggaaatcgagatagagcggctaaaatcggagattgctgga
ctgctcaaggataatgaaaagatccagtctaatccagaggtacctcccagtgaagatgac
ttggagatcaagaaaatcaaaaaggtccagagtttcctgcgaggttggatttgccgcagg
aagtggaaaaccatcatccaggactacatccgttcacctcacgctgagagcatgaggaaa
aggaaccaggtggtgtttagcatgctggaagcagaagccgaatacgtccagcaactccac
atcctggtcaacaacttcctccggccgctccgcatggccgccagctccaagaagccgccc
atcacccacgacgatgtcagcagcatcttccttaacagtgagaccatcatgttcctccat
cagatcttctaccagggtctgaaggcacggatagccagctggcccactctggtgctggct
gacctgttcgacatcttgctgcccatgctgaacatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggcccactgcaaacagaaccgagattttgacaagctgctg
aagcagtacgaggccaagcccgactgtgaggagaggacgctggagacctttctcacttac
cccatgtttcagatccctcgttacatcctgacgctgcacgagctactggctcacaccccc
catgagcacgtggagagaaacagtctggactacgctaaatctaaactggaggaactctcc
agaatcatgcatgacgaggtgagcgagacggagaacatcaggaagaacctggctattgag
cggatgattgtagagggctgtgaagtgctcctggacaccagtcagacatttgttagacaa
ggttccctgatccaggtgccgatgagcgagaaagggaagatcacgagaggccgcctgggc
tctctgtctctgaagaaagaaggagagagacaatgtttcctcttctccaaacatctcatc
atctgtacccgcggctccggggggaaacttcacatcactaagaatggagtttcctctctc
atagactgcacactgatggaggagccggaggggacggatgatgaaaccaaagtggagcgg
agtggtatggacacagagaacctggacttcaaagtgatggtggagcccaaagacgtccag
ccttacaccgtcatcctggtggcttcatcccgacaggagaagtcagcgtggacgagcgac
atctgccagtgcattgacaacatccgctgcaacggtctgatgatgaacgccttcgaggaa
aacagtaaagtcaccgtgcctcagatgattaagtcggacaccagcttgtactgcgacgat
gtggacatccgcttcagcaagatgatgaactcctgcaaggtgctgcagatccgctatgcc
agcgtggaacgattgttggagaggctcaccgacctgcgcttcctctccatcgacttcctg
aacaccttcctccactcgtaccgcgtcttcaccagcgctgacgtggtgctggagaagctc
atcaccatctacaagaagcccatcagcgccatccccgcacgttctttggagcttttcttt
gccagcagccagagcaacaaactcctgtacggcgagccacccacgtcgccgcgtgccagc
cgcaagttctcctcccctccccccctcgccatcaccaagacgtcctcgccaaaccgccga
cgcaagctttcgctcaacatccccatcatcacggggggcaaagccctggacctggctgct
ctcaactgttctcccaatggctatgcaagcatgcactccaccatgtcacctttcagcaag
accacccttgacatcaacaagctttacgtgtccagcaccaaggccagcaaaatccccgat
gagggagagaccaaagctgaaggcaaggctgaggagaccgtcctcaacaagcaagatctg
tctgtgagagaggaatgtaatgaggacccaagtcagagtgaggaaacagaggcggagatg
tctcctcccaaatcaccatcgacacccaagaatgtcaagtcaaaaaactctgagttttcc
ctgttttccttcaacaatggcatggtggtgtcatcttgccgggagctggacaataaccgc
agtgccctttctgccgcctcggccttcgccatcgccaccgctggtgccaacgagggcacg
ccaaccaaggagaagtaccgtcggatgtcgctcgccagcacaggttttcctacagaccag
aggaatggagacaaagagtttgttatcagaagagcggccactaacagagtgctgaacgtt
ctgcgtcactgggtctccaaacactcgcaggactttgagctgaacacagagctgaagacg
cgggtaatcagcttcctggaggaggtgatccacgacccagagctcctcacacaggaaaga
aaggcagctgccaacatcatcaggactctcactcaggaggatccaggagataaccaggtc
acactggaagagatcacacagatggcacaggaggactgtaaaactgagccttttgagagc
cactcggccctggagatagctgagcaactcacactgctggaccacctggtcttcaaggtc
atcccatacgaggagttctttggtcaaggctggatgaagaacgacaagaacgagagaact
ccctacattatgaaaactaccaagcatttcaatgatatcagcaacaagatcgcgaccgag
atcctgcagtgggacgatgtcaacctgagagcggcggtgatcgagaaatgggtcgcagtg
gcagacatctgtcgctgcctccacaactacaacgccatgctggagatcacatcctcccta
aaccgcagctccgtcttccgcctcaagaagacctggctcaaagtctccaagcagacgaag
accgtgatcgacaagttacagaagctggtgtcatcagagggacgattcaaaaacctgaga
gaagctctgaagaactgcgaccctccctgtgttccctacctgggaatgtacctgaccgac
ctggccttcatcgaggagggaacacccaactacaccgaggacagcctggttaacttctcc
aagatgagaatgatatctcacattatcagagaaatacggcaatttcagcaaacggcttac
aagattgattatcaaccaaaggttgcaaagtacctgctggacagcagtacgacactggat
gaggagagcctgtatgacgcatctctaagaatcgagcccaaaacttcaacatga
DBGET
integrated database retrieval system
