Trematomus bernacchii (emerald rockcod): 117471495
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Entry
117471495 CDS
T09643
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117471495 (cilp)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
117471495 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
TSP_1
Ig_2
CarboxypepD_reg
CarbopepD_reg_2
ig
Ig_5
V-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
117471495
NCBI-ProteinID:
XP_033972454
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MSMRPLLLLILGITTATGVTAQDNHEWTTWFNIDHPGGRGDYEQLEAIRFYYRSRVCQTP
LAIEARTTEWVPARETGETVHADPTVGFWCLNEEQGPERNCSNYAVRFLCPKDDSVNIQG
TWGRWSDWSACPALCGQVGLQQRSRNCESSSVPCSGPKLEAKPCDGPECPETDCTLQCGM
GKVNAECDACMCEEHILLGSVRGAGGLTAEGATLLRNGKLLTLSNHNGHFRIPGICPDGN
TTITVTLQGHAPFSVVVPYSAERTSVLTIQLKRTEKLHVLSNLESKARRQGQTAAFCCKV
AGTPQPDKYQWFHNESLLEKHSESTLVLRNLRLEQTGEYYCRASGSSGAIKTKPATLKVL
GWDEHSCNPLPESHLIRLPHDCYQNSTDSLYYNVGKCPSSTCSGQLDNGIRCKDKVTYCC
GVKKMEARQLTCQGYQLPTMVVTECGCQKCVDTKAIVHGRAIAADNGEPMRFGHVFMNGV
RISRTGYKGTFSIQVPPDTERLVLTFVDNMQKFINTTKVLPFNTKGGAVYHEIKLLRKKA
PVTISSTEINTLELGEAEGREAMVQIQIPPYSFYTERGEVFTGKVNASVTFLDPRDVSTA
AAAQSDLNFVGDEGDTLPLRTYGMFSVDFRGEENNEPLNAGEVKVFLDSAQVKMSEHLNT
MKLWSLNPETGLWEEEGSLQVEKKRRGKREERTFLIGNMEIRERRLFNLDVPENRRCYVK
VRAFRSERFMPSEQVEGVVVSLINMEPTAGFSTNPRAWGRFDSVITGSNGACLPAFCDEQ
KADAYSAYVMANLGGEELEAVSSSPKLNPNLIGVPKPYLDKMNYRRTDHEDPRVKKTAFS
INVAKPGSNAAEDSNGPVYAFEKLKECEEAPFSAAHFRFTRVEGDRYDYNTVPFNEDDPM
SWTEDYLSWWPKPMEYRACYIKVKINSPHEINVRSRNMGGTHPKTVGQLYGLRDTRSIRD
MEQAKMSAVCLEFKCSGMLYDQERVDRTLIKVIPQGSCKRDNVNTILQEYLVNHLPLAVN
NDTNEFTMLGPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDGTSDGTSRVMKSNEGVAM
TFICGDREVSSPSVFQALQNPQGQTITSVVRGEGRQNRRRQRANAPRSSSRRSTRNPTGR
RAKTTS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgaggcctcttcttcttctcatcctgggaatcaccacagccactggtgtcaca
gctcaagacaaccatgagtggacgacatggttcaatattgatcaccccggaggccgtgga
gactatgagcagctggaggccattcgtttctactaccgttcccgagtgtgccagaccccc
cttgcaatcgaagccagaaccactgaatgggtcccagcccgtgaaactggggagacggtg
catgcagaccccactgtgggcttctggtgcctcaatgaagagcagggtcctgaacgcaac
tgctccaactatgcagtccgtttcctctgtcccaaagatgacagtgtaaacattcagggt
acctggggacggtggtcagactggagtgcatgcccggccctctgtggtcaggtgggactc
caacaaagatccagaaactgcgaatctagctctgtaccttgcagtggacctaaattggaa
gcgaaaccatgcgatggacctgagtgccctgaaacagattgcaccctgcaatgtgggatg
gggaaggtgaatgctgagtgtgacgcatgcatgtgtgaagagcacatcctgctggggtct
gttcgaggtgctggaggtctcacagctgaaggggctaccctccttcgcaatgggaaactc
cttacccttagcaaccacaacgggcattttcgcatccctggtatctgccctgatggcaac
accaccataactgtcactctgcagggtcacgcccccttcagcgttgttgtgccttacagt
gctgaacgcacctctgtcctaactatccagctaaaaagaacagagaagcttcatgttttg
agcaaccttgagagcaaggccaggaggcagggacaaacggccgccttctgctgcaaagtg
gcgggaacaccacaacccgacaagtaccaatggtttcataatgagagtctcttggagaaa
cactctgagagcaccttggtcctaagaaacctgcgtcttgagcagactggggagtactac
tgcagagccagtggttcctctggggctattaagaccaaaccagctacactaaaagtctta
ggttgggatgagcactcatgtaatcctctgcccgaatcccacctcatccgccttccacat
gactgctatcaaaacagcacagactctctctactacaatgtgggcaagtgcccctcaagt
acatgttctggacagcttgacaatggcatcaggtgcaaagacaaagtcacttactgctgt
ggtgtcaaaaagatggaggcgaggcagctaacatgccagggctaccaactgcctaccatg
gtcgtgactgaatgtggctgccagaaatgtgtggacaccaaggccattgtgcatggtagg
gccattgctgcagacaatggtgagccaatgaggtttggccatgtctttatgaatggagtt
cgaatcagccgcacaggatacaaaggtaccttctccatccaggttcctccagacacagag
aggctagtcctgacttttgtggacaacatgcagaaattcatcaacacgacaaaggtactt
ccatttaacactaaaggaggggctgtttatcatgagatcaaacttctcagaaagaaagcc
cctgttactatcagctctacagaaatcaacactctggagcttggggaggcggagggccgg
gaggcaatggttcaaatccagattcctccctattccttttatacagaaaggggagaagtc
tttactggtaaagtaaatgccagcgtaacgttcctagaccctagagacgtctccacagct
gctgcagctcaaagtgatctcaactttgtaggagatgaaggagataccttgccactgaga
acctacgggatgttctctgttgactttaggggggaggaaaacaatgagcccctgaatgca
ggtgaagtgaaggtgttcctggattcagcccaggtgaagatgtccgagcacctcaacacc
atgaagctgtggtcactgaaccctgaaactggcctgtgggaggaggaaggaagtctgcag
gtggagaagaaaagaagaggcaaaagggaggagagaacgtttctgattggcaacatggag
atcagagagagacgtctttttaacctggatgtcccagagaaccgcaggtgttatgtgaaa
gtgagggccttccgcagtgaacgcttcatgccaagtgagcaggtggagggagttgtggtg
agtcttatcaacatggagccaacagctggcttctccactaacccacgtgcctggggccgt
tttgatagtgtaatcactggctccaatggggcatgtcttcctgccttctgcgatgaacaa
aaagctgatgcttactctgcctatgtcatggcgaaccttggaggagaggagttggaggct
gtgtcttcttctccaaaactcaatcccaacctcattggagttcccaagccttatctggat
aagatgaactacagaaggactgaccacgaagaccccagagtgaaaaagactgcattcagc
attaatgtggcaaaaccaggttccaacgctgcagaggacagcaacggaccagtgtacgcg
tttgagaagttgaaagaatgtgaggaggccccattcagtgcggcacacttccgtttcaca
agagtagaaggagaccgttatgattacaacacagtgcccttcaatgaagatgacccaatg
agctggaccgaggactacctgagctggtggcctaagccaatggaatacagagcctgctac
atcaaagtcaaaatcaatagcccacatgagatcaatgtgcggtcccgcaacatgggtggc
acccacccaaagactgtaggccagctgtatggactccgagacactcgcagcatccgtgac
atggagcaggcaaaaatgtcagcagtgtgcctggagttcaagtgcagtgggatgctgtat
gatcaggagcgtgtagatcgtaccctgattaaggttattccacaaggaagctgtaagaga
gataatgtcaacactattcttcaggagtatctggtcaatcacctgcccctagctgtcaat
aatgacaccaatgagttcaccatgctaggacctcttgacccccttggacacaactatggc
atttatacggtgacagaccaggacccccgcacagccaaagaaattgcacttggacgctgt
tttgatggcacctctgatggtacatctcgtgtcatgaagagcaatgaaggtgttgcgatg
acgttcatctgtggagatcgtgaagtgtcaagccctagtgtcttccaggctctgcagaat
cctcaaggtcagacaataacgagtgttgtgagaggagagggccgacagaaccgacgccgg
cagagggccaatgcacctcgcagcagcagcagacgtagcaccagaaatcctacaggacgg
cgtgccaagaccacgagctaa
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integrated database retrieval system
