Trematomus bernacchii (emerald rockcod): 117471509
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Entry
117471509 CDS
T09643
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117471509 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117471509 (copb1)
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117471509 (copb1)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117471509 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
117471509
NCBI-ProteinID:
XP_033972477
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVSSESEPPSEVTLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLIFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEQLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAVKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDSLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKDDIQSVMTEVR
RSLGEIPIVENEIKRDSGEVKADDEVSAAPAQKLVTEMGTYVTQSALSSNRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVGIVQDKKKQNSFVAESMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RSVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEANDPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTNDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKSNV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaacgtgtgttacactctgatcaatgtttcatctgaatcagagcct
ccttctgaggtcacacttaaggctgatctagaaaagggggagatcaaggcaaagaccgaa
gccctgaagaaggtcatcatcatgatcctgaatggtgagaagttgccaggactgctgatg
accatcatccgcttcgtgctgcctcttcaagaccacaccatcaagaagctgctgctgatt
ttctgggagattgttcccaaaaccaccccagacggaaagctgctgcaggagatgatcctg
gtgtgtgacgcctacagaaaggacttgcagcatccaaacgagttcatccgtggctccact
ctgcgtttcctgtgcaagctgaaggagtccgagttgctggagccgctcatgccagcgatc
cgggcctgcctggagcaccgccacagttacgtgcgccgcaacgccgtcctggccatttac
accatctacaggaacttcgaacaactcatcccagatgctccagagttgattcatgatttt
cttgtcaatgagaaagatgccagctgcaagagaaatgcgttcatgatgctgattcatgcc
gatcaggatcgagctctggattacctcagcacgtgtatcgaccaggttcacacttttggc
gacattctccagctggtcattgtggagctgatttacaaagtttgccatgctaacccctct
gagcgtgcacggtttatccgctgcatctacaacctgctgcagtcctccagcccggctgtg
aagtatgaggctgctggcactcttgttaccctctccagtgctcccacagcagttaaggct
gcagcccagtgctacattgatctgatcatcaaggagagcgacaacaatgtgaagctcatt
gttctcgatcgtctgattgagctgaaggagcatcccactcacgagcgtgtactccaggat
cttgtgatggacatcctgcgtgtcctcagcactcctgacctggaagtcagaaagaagacc
ttgcagctggcactggacctggtttcatctcgcaatgtagaagagttggtgatagttttg
aagaaggaagtgatcaagacaaacaatgtaacggaacatgaagacactgataagtaccgg
cagcttctggtgcgcactctccattcctgcagtgtgcgcttccctgacatggcggccaat
gtcatacctgtgctgatggagttcctcagtgacactaatgaggcagctgctgctgacgtg
ctggagtttgtgagggaggccattcagaggtttgacagcctgagacccctcatcatcgag
aagatgctggaagtctttcacgccatcaaaactgtcaagatctacaggggagcgttgtgg
atcctgggagaatactgcagcaccaaggatgacatccagagtgtgatgacagaagtacgc
aggtccttgggagagatccccattgtagaaaatgagatcaagagagactcgggggaggtg
aaagcagatgatgaagtgagcgcggctccagcccagaagctggtgacagagatgggaacc
tatgtgacgcagagcgccctcagctccaacaggccttccaaaaaagaagaggatagacct
ccactcagaggcttcctgatggacggagacttctatgtggcagcttccctggccaccacc
ctgaccaaagttgccctgcgttatgttggaattgttcaagacaaaaagaaacaaaattcc
tttgtggcagagtccatgctgatcatggtcactgtgctgcacctgggcaagtcctctttg
cccaagaagcccatcacagacgacgatgtggaccgcatctcgctgtgcctcaaggtcctg
tcggagtgctcgcctcttatgaatgacattttcaacaaggagtgccgcaaatccctgtca
catatgctgactgtcagactggaggaggagaagctgtcacagaagaaagagtctgagaaa
cgaagcgtaacagtgcaggcagacgacccgatctccttcatgcagctgaccgccaaaaac
gagatgacttctaaggaggatcagttccagctcagtctgctggctgctatgggcaacact
cagaggaaagaggctaatgatcccctggcttcaaaactcaacaaggtgacccagctgaca
gggttctcagacccagtgtacgctgaagcctatgttcatgtcaaccagtatgacatcgtg
ttggatgtgctggtggtcaaccaaaccaatgacactctccagaattgcactcttgagctg
gccactttaggtgatctcaagttggttgagaagccttcacctttaactttggctcctcac
gattttgctaacatcaaggctaatgttaaagtggcctcgactgagaatggcatcatattc
ggaaacattgtgtatgatgtgtcgggagccgctagcgacagaaactgcgtcgtcctcagt
gacatccacattgacatcatggactacatccagcctgcgtcctgcactgatgcagaattc
agacagatgtgggcagagtttgagtgggaaaacaaggtgacagtgaacaccaacatcact
gatctgaacgagtaccttcagcatatccttaagtccaccaacatgaagtgtctgactcct
gagaaggcgctgtcgggcttctgcggcttcatggctgccaacctctatgctcgttcaatc
tttggcgaagatgccctggctaacgtcagcatcgagaagcccatccacctggggcctgat
gctcctgtcaacggacacatacgcattagagccaaaagtcaggggatggccttgagtctc
ggagacaaaatcaacctctcccaaaagaagtcaaatgtctga
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integrated database retrieval system
