Trematomus bernacchii (emerald rockcod): 117471517
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Entry
117471517 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: myomesin-2-like
KO
K24495
myomesin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117471517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117471517
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117471517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
C2-set_2
Ig_J_second
Tissue_fac
CRLF2-like_D2
Interfer-bind
C2-set_3
Motif
Other DBs
NCBI-GeneID:
117471517
NCBI-ProteinID:
XP_033972489
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MSTRMKRGAYDHEYHHKQSKYVVKEYSSSTAMEERYEHKTQSRIQEVVTSKMGDKYVREE
PMIRGPTFLVRLRSHTVFEKTPAKLCCTVAGFPLPSVQWYKDGSILGMSSGQFLIEAKGG
IHTLEIPRCSTDDTAQYTAVACNSHGQASSLASVIVKRFKVEEEISSYAWLPYTAAMLPK
IQYTKINITFLEKFGPVFATEGDSVTLTATMTLSPNLANLQPDAQWYRDDTRLSDSKWVK
IVTGRGITSLTXPNLFKDDEGLYTIRMVTKGGTAEHGAFVSVSDGPPPIAGAPGAPMDIK
IHDANRDYVITSWKPPNTTTEGPILGYFVDKCEVGTENWTQCNDHPIKICKYPVPGLFEG
HSYYFRVRTVNSKGVSKACRISEPIAALDPTEFERLHAKRLGGNLDVVSYHDEVEAEGKP
PGAASGMYASETDRTYVVLSWKAPVYSSKAPMWYYIEKSLADSGAWQRVNTQVPIRSPRY
AVFDLAEGKLYQFRVVSANIYGASAPSEPTGPIQTQELKGVPSAPGQVISTRETDTSVLI
QWAPPKEPNNLIGYYIDQCVKGSADWTSANHKPHKSTKFVVSGLTKGQTYVFRVQAINEL
GLSDESQESAPLTVKAALTAPSAPYDIALLNCDGHSVVLNWKKPTHNGGSSIKEYYVDKR
RSGATVWREVHIPPVTERLYKAEGLTEGAVYQFQVYAANLAGLGPASKHSADISCEAWTM
PEPGPGYDLTFSEVRDSSMLVEWKKPVYTGSGSITGYHVEYAKKGTSDWTTANETAASHR
FLKVTGLEAGTSYVLRVRAVNAAGVGMASMASDPVTAQAVEGSQEVSCVVDEKSGDIVLS
FESCQLNEGSQFAWKKDYKEVTDFSKGIVIKTEGSHSKLIFKNADKEDFGTYSVSVTSTM
GVSSSHTITTEELTKMLALSYEIRHPVIPLKSELAYKILERGRMRFWLQAEGISSNVTYK
FFANNKELSGADPNKMGHDLATGIIEFMLDHFTEEDEGTFTCQIADGGGKAQSSLVLIGD
AFKAALAEAEYQRREYIRVKEGPHFSEFLTLHVGEDCCVSLVCKVSNLKKESAFLWYKED
TEIVPDVKPDMTSGVCKLPIKLFSLKTAGVYKATISDDRGKDMSQIDISGKVFEDAINKI
SQLAGASAAELAIHCTETGIQLQCHMKYYTTEMNIAWCHGETKLAHSDKIVIGGTPAMAT
MELIEPMEKDKGLYSIVITDPETAHKRVLDLSGDVYEKAFAEFQKLKAEAYAEKNRGKVV
GGLPDVVTIMEKKTLSLTCTVCGDPKPQVSWLKNGADVIPDDQYVVSIDQGRFASLTING
VTMEDSGKYTMIVQNKYGGESVDIVVSVYRHGEQIPEARPTLTPKTMIPPKLPIEIPQPK
SAQPPPSPAPSTPSPAPPKAGRGVKSPTPTRRK
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgaggatgaaacgtggggcttacgaccacgagtaccaccacaaacagagcaaa
tatgtggttaaagagtacagcagttctacggcgatggaggaaagatatgagcacaaaaca
cagtctcgcatccaagaagtggtaacctcaaagatgggggacaaatatgtgcgtgaggag
ccgatgatcaggggaccgacgttcctagtccgactcagatcccacaccgtgtttgagaaa
actcctgccaaactctgctgcactgttgctggcttccccttgccttctgtacaatggtat
aaagacggctcgatcctgggcatgtcctcggggcagttcctcattgaagctaaaggtgga
atccatactctggaaatcccaagatgctccactgatgatacggcccagtacaccgctgtg
gcctgtaacagccatggacaggcttctagtctggcctccgtcatcgtcaagaggttcaag
gtggaggaggagatcagctcatacgcttggttgccttacacagctgccatgcttcccaag
atccagtacactaaaatcaacatcactttcctggagaagtttgggccagtgtttgccacc
gagggagattctgtcactctgactgccaccatgaccctgagccccaacctggccaacctg
cagcccgatgcacagtggtatagagatgacacgcgtctgtctgactctaagtgggtgaag
atcgtcaccggcagaggcatcacctccctgactnatcccaacctgttcaaagacgacgaa
ggcctctacacaatacgcatggtcactaaaggaggcaccgccgaacatggagcattcgtc
tctgtctcagatgggcctcccccaatcgccggtgcacccggtgctcctatggatattaag
atccacgatgccaacagggactatgtcattacgtcatggaagcccccaaataccaccaca
gagggaccaatcctgggatactttgtggacaaatgtgaggttggaactgaaaactggacc
cagtgcaatgatcaccccataaagatctgcaaataccccgtgcccgggctgtttgagggg
cactcgtactacttcagagtccgaaccgtcaactctaaaggagtcagcaaagcctgccgc
atctctgagcccatcgccgcgctggaccccactgagtttgagaggctgcatgccaaaaga
cttggaggaaacctggatgttgtgtcttaccatgatgaagttgaagctgaagggaagcct
ccgggtgctgcttcagggatgtacgcctcagaaaccgacaggacttatgttgttttgagc
tggaaggcacctgtgtattccagcaaggctcccatgtggtactacatagaaaagagcctg
gcagacagcggtgcgtggcagcgcgtcaacactcaggttcctatcagatctccccgttac
gccgtctttgacctcgcagagggcaaactctatcaattcagagttgtgtctgctaatatc
tatggagccagtgcgccgtcagagcccaccggccccatccagactcaggaactcaaaggt
gtgccatctgctcccggtcaggtgatttctaccagggaaaccgacacctctgtcctcatt
cagtgggctcctcccaaagaacccaacaatctgattggctactacatcgaccagtgtgta
aaagggtccgcagactggacttcggccaatcacaaacctcacaagagcaccaagttcgtg
gtcagtggcctgactaaaggacagacctacgtgttccgcgtgcaggccatcaatgagctg
ggcctcagtgacgaatcccaggagtccgctcctctgactgttaaggctgccctcaccgcc
ccctctgctccttacgacatcgcattgctgaactgtgacggccactcagtggttctgaac
tggaagaaacccactcacaatggaggatcaagcatcaaggagtattatgtggacaaaaga
cgcagtggagccaccgtgtggagagaggttcacatcccaccagtcacagaaagactttat
aaggctgagggcctgacggagggagccgtctaccagttccaagtttatgcagccaatctg
gctggcctgggaccagcgtccaaacactcagccgacatcagctgtgaggcctggaccatg
ccggagcctggccctggctatgacctgaccttcagtgaagtgagagatagttcaatgttg
gttgagtggaaaaagcctgtctatactggctctggatcaatcacaggatatcatgttgag
tacgccaagaagggcacttctgattggaccacagccaatgagacggctgccagtcaccgc
ttcctcaaggtaacaggtctggaggcgggcactagctacgtgttgagagtgcgtgcggtc
aacgctgcaggagtgggaatggcgtcaatggcctctgatcccgtcactgcccaggctgtg
gaaggctcccaggaggtgtcctgtgttgtggacgagaagtccggcgacattgttctctcc
tttgagtcctgccagttgaacgagggctctcagtttgcctggaagaaagattataaagaa
gttacagatttctccaaaggaatagtgattaagaccgaaggcagccattctaagctgatc
tttaagaacgcggataaagaggactttgggacgtactctgtttctgtcaccagcaccatg
ggagtgtcttccagccacaccatcactactgaagagttgacaaagatgctggcactcagc
tatgaaatcagacacccagtcatccctctgaagtctgagttggcctataagattttggag
agaggcagaatgaggttctggctgcaggcagaaggcatttcttccaatgtcacctacaaa
ttctttgccaacaacaaggaactgtctggagctgatcccaacaagatgggccatgacctc
gctacaggtatcattgagttcatgttggatcatttcactgaggaagacgaggggacattt
acctgccagatcgcagatggaggcggaaaagcacagagctcactggttctgattggagac
gctttcaaggcagcgctggctgaggctgagtaccagaggagagagtacatcagagtcaag
gagggtccccacttcagtgagttcctgacacttcatgttggagaggactgctgcgtctct
ctggtctgcaaggtttctaacttgaagaaggaatcagcgttcctctggtacaaagaagac
acagagatcgtcccggatgtgaagcctgacatgacatcaggagtctgcaaactcccaatt
aaactgttttccctgaagacagcgggagtttataaggccaccatcagtgacgacagagga
aaagatatgagccaaattgacatctctggaaaagtatttgaagacgccatcaacaagatc
agccaactggcaggagccagtgccgcagagctggcgattcactgcacagaaacaggcatc
cagctgcagtgccacatgaagtactacaccaccgagatgaacatcgcctggtgccatggt
gagactaaactcgcccacagtgacaagattgtgattggaggaacccctgctatggcaacc
atggagctgattgagccaatggagaaagataagggactgtactccatcgtgatcaccgac
cctgaaaccgcacacaaacgcgtactggacctcagcggagacgtatatgagaaagccttc
gctgagttccagaaactcaaggccgaggcctacgctgagaagaaccgtggtaaggtggtg
ggaggactgcctgatgtggtcaccattatggaaaaaaagaccctgagtttgacatgtaca
gtgtgtggggaccccaagcctcaggtctcatggttgaagaatggagccgatgtgatacct
gatgatcagtacgtggtctccatagaccagggcaggtttgccagtctgacgatcaacggt
gttaccatggaggattctggcaaatataccatgattgtccagaacaaatatggaggggag
tctgtggatatagtggtcagtgtgtaccgtcatggagagcaaatcccagaggccagaccg
actctgacccctaaaacaatgatccctcctaaactccccattgagatcccgcagcccaag
tcagcccagccccctccaagccccgccccctccactcctagccccgcccctccaaaagct
ggaagaggagtgaagagtcccactcctaccaggaggaagtag
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