Trematomus bernacchii (emerald rockcod): 117471558
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Entry
117471558 CDS
T09643
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117471558 (ctr9)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117471558 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_6
TPR_11
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
ARM_TT21_C
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
117471558
NCBI-ProteinID:
XP_033972543
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQDKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMNEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GFFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFFKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLCKAGDKMRFDLALASSEARQCSDLLSQAQYHVARARKQDEEDKE
LRAKQQQERDVLRQQMMKERTDKRNKQVEEQKKLLEQRALYVEKTKGLLSFTEGSKEMGK
EKRKGGGRRKKGDIDEFVNDDSDEEKELRKKKKRKGGSDDEEGGSRPKRQRKPKERKRME
KSQPERLPPSLKGKIKSKAIISSSDSSSDEDGLKIAEEKQQKDSGSGSDNDGGHKTRIAS
ESESDGGKNRSGSEAGSPRRSAGSPRRSAGSPRRSAGSDDSGSDRPVKKRRVQRQSDSEQ
SDNESKKSRSGSEDESRPASPAAVSERGSEAGSDNEGSPRRSNNASEREASNNDDSD
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatccatcgaaatccctttacgggacaccgatgaggtcatcgagcttgac
tttgaccagctgcccgaaggagacgaggtcatcagtatcctgaagcaggagcacacacag
ctgcacatctggatcgctctggcgttggagtactacaagcagggcaaaactgaggatttt
gtcaagcttttagaggcagctcgtatcgatggaaaccttgactacagagaccatgagaag
gaccagatgacctgtctggacacattggcagcttattatgtccagcaagcgcgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacgctgctgtacacgatggca
gacaagatcatcatgtatgatcagaaccatttgttgggacgagcctgtttctgcctgctg
gaaggagacaagatggaccaggccgacgctcagttccacttcgtcctcaaccagtccacc
aacaacatccctgctttgcttggtaaggcctgcatctccttcaataaaaaggactacaga
ggagcactggcttactacaaaaaggctctgcgtacaaaccccggctgcccagccgaggta
agacttggaatgggacactgttttgtgaagctcagcaaactggagaaggctcgtttggcg
tttggtcgagccctggagctgaactcaaaatgtgtgggagctctcgttggtttggcggtt
ttagagctcaacagcaaggagcccgattccatcaagaacggcgtgcagctcctatcgcgc
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctggccaaccactttttc
ttcaaaaaggattacagtaaagtgcagcatctggctcttcacgctttccacaacacagag
gtggaggccatgcaggctgagagctgctaccagttagctcgctccttccacgttcaggag
gactatgaccaagcgtttcagtattactaccaagccactcagtttgcctcgtccaccttt
gtgttgcccttctttggcctggggcagatgtatgtgtatcgaagagacaaggagaatgct
gcgcagtgcttcgaaaaggttttgaaggcctaccccaacaactatgaaactatgaaaatt
cttgggtctctctatgcgacatctgacgatcaggacaaaagagacatcgccaaaggtcat
ttgaagaaggtgacggagcagtacccagacgacgtggaggcgtggatcgagctggctcag
atcctggagcagaccgacattcagggagcgctgtctgcgtacggcacggccacccgcatc
ctgcaggagaaggtgcaggccgacgtgccgcccgagatcctcaacaacctcggggctctt
cacttcagactgggaaacctcggagaagcaaagaaatactttctcgcatctctggagcgg
gccaaggctgagggggagcacgacgagcattactacaacgccatttctgtcaccacctcc
tacaatctggcccgcctgtatgaggcaatgaatgaattccacgaggctgagaaactctac
aaaaacatcctgagagagcatcctaactacgtggactgttatttgcgtctcggagcgatg
gctcgcgacaaaggcaacttctatgaagcctctgattggttcaaagaggccctgcagatc
aatcaggatcacccggatgcctggtccctgatagggaaccttcacttggccaaacaggaa
tggggtccgggtcagaagaagtttgagcgtattctgaagcagccgtccactcagaacgac
acctactccatgctggctctgggaaacgtgtggctgcagaccctgcaccagcccaccaga
gaccgggagaaggaaaagagacaccaggaccgagccctggccatatacaagcaagtcctc
cgaaatgactctaaaaacctctacgctgccaatggcatcggtgccgtcctcgctcacaag
ggcttcttcagagaggctcgtgacgtgtttgcacaggtgagggaggccacagctgacatc
agtgacgtctggctgaatctggctcacatctatgtggaacagaagcagtacatcagcgct
gtgcagatgtacgagaactgcctgaagaagtttttcaagtatcagaacacagaggtgctg
ctgtaccttgcgagggcactcttcaaatgtgggaaactccaagagtgcaagcagatgctc
ctgaaggcccgccacgtggcgcccagcgacacggtgctgatgttcaacgtggcgctggtg
ctccagaggctggccacgctcgtgctgaaagacgagaagagcaacctgaaggctgtgctc
agcgctgtcaaagagctggaactggctcacaggtatttcagttacctctgcaaggctggc
gacaagatgaggtttgacctcgctctcgcttcctctgaagccaggcagtgctctgatctg
ctcagtcaggctcagtatcacgtggcgagagccaggaagcaggatgaggaggacaaggag
cttcgtgccaaacaacaacaggagagggacgtacttcgtcagcagatgatgaaagaacgg
acggataagcgcaacaaacaggtggaggaacagaagaagctcttggagcagagagctttg
tacgtggagaagaccaagggcctgctcagcttcacagagggatcaaaggaaatgggcaaa
gaaaagaggaagggcggtggacgtcgcaagaaaggcgacattgatgagtttgtcaacgat
gactctgacgaggagaaggaactgaggaagaagaagaagagaaagggcggcagtgatgat
gaggagggaggatcgcggcccaagaggcagcgtaaacccaaagagcgcaagaggatggaa
aagtcccagcctgagcgcctaccaccgtctctcaaaggaaagatcaagtccaaggcgatc
atctcctcttctgattcttcttcagatgaagatgggctgaagatagctgaagagaaacaa
caaaaagacagtggttcagggtctgataacgatggcggccacaagacgcgcattgcgtct
gagagcgagtcagatggaggtaagaaccgctcgggcagcgaggcgggcagcccccggcgc
tctgcgggcagcccccggcgctctgcgggcagcccccggcgctctgcggggtccgacgac
tctggcagtgaccgtccagtgaagaagaggagggtgcagcgacagtctgactccgagcag
tctgacaatgagagcaagaagagtcggtcgggatctgaagacgagtcccggcccgcttcg
cccgccgcagtgtcggagcgaggatctgaggcggggtccgacaacgagggctccccccgc
cgctccaacaacgcctctgaacgggaagcctccaacaatgacgacagcgattaa
DBGET
integrated database retrieval system
