Trematomus bernacchii (emerald rockcod): 117471578
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Entry
117471578 CDS
T09643
Name
(RefSeq) sodium/potassium/calcium exchanger 1-like
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117471578
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117471578
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
117471578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_Ca_ex
Nop14
DUF913
Motif
Other DBs
NCBI-GeneID:
117471578
NCBI-ProteinID:
XP_033972578
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MNFLFGVKTTRAMKVHSPPRRRLKRSRLLFFLSGVLLCFVYTLTLKARLSEPGASAQRDH
TLGADVNSDDDDVVEVNIREVIGSNETKEEEVVLLESTNTPPVIVVNRTDIQQCIYVDPQ
PPKPPPTQPPPTTPHRKSGFPTDIFTVTQRRQGWVVLHLMGMVYMFVALAIVCDEFFVPG
LEVITNKLEISEDVAGATFMAAGGSAPELFTSLIGVFISHNNVGIGTIVGSAVFNILFVI
GMCAIFSREMLHLTWWPLFRDVTFYTLDLIMLIVFFVDNMILWWESMLLVLGYISYVSFM
KFNSQIEHAVKTQINRHMSIVKVWTAEDPEKESEAPPAPPAATSAAPPALKAEEVSKREP
EPAPSTPRGNKPPSDPQEDKERLRVRPILQRGGSSASLHNTSLRSTIFQLMIHTLDPLRE
DADQKLTELATDANAAAGAPKGAAAEPSTSQPQKKEEETREKTADQPDESKAAAGGSEGS
QGSTEDECGDEESEDSDESEGDDLDDEENKEEEEEEESEPLSLKWPDTRRKQATYLFLLP
IVFPLWLTLPDVRNLASRRYFPVTFIGSILWIGVFSYLMVWWAHQVGETVGISEEIMGLT
ILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITIGLPVPWLIYTLLHNGEPVTV
SSNGLFCAIVLLFIMLLFVIISIAVCRWKMSRMLGLTMFALYFVFLVLSVMLEDRILICP
ISI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcctgtttggagtcaagaccacgagggcaatgaaggtgcactctcccccgagg
aggagactcaagcgcagtcgcctcctcttcttcctctcaggtgtgctgctgtgcttcgtc
tacacgctgactctgaaggcaaggctgtcagagcctggagcctccgcccagagggaccac
actctcggagcagatgtgaatagtgatgatgatgatgttgtggaagtcaacattcgggag
gtgatagggtcaaatgagacgaaggaggaggaggttgtcttacttgagagcaccaatact
cctccggtgatagttgtcaacagaacagatatccaacagtgtatctacgtagatcctcaa
cctcccaaacctcccccgactcaaccgccccccaccacccctcacaggaagagcggtttt
ccaacggacatcttcacagtgacgcagcggcggcagggctgggtggtcctgcacctcatg
ggcatggtctacatgtttgtcgccctggccatcgtctgtgatgagttctttgttcccggg
ctggaggtcatcaccaacaaactggagatctctgaagacgtggcgggggcaaccttcatg
gcggctggaggctccgcccccgagctcttcacctccctaatcggcgtcttcatctcccac
aataacgtgggcatcggcaccatcgtgggctcggccgtcttcaacatcctgtttgtgatc
ggcatgtgcgccatcttctcccgggagatgctgcacctgacctggtggccgctcttcaga
gacgtgaccttctacaccctggacctcatcatgctcatcgtgttctttgtggacaacatg
atcctgtggtgggagagcatgctgctggtgctgggctacatcagctacgtgagcttcatg
aagttcaacagtcagatcgagcatgcggtgaagacccagatcaacaggcacatgagtatc
gtcaaggtgtggaccgcggaggatccagagaaggagagtgaagctccaccagctcctcct
gctgctacctctgctgctcctcctgcactcaaagctgaagaagtgtccaaacgagaacct
gaacctgctcccagcactcctcgaggcaacaaaccaccatcagacccccaagaggacaaa
gaaagactcagggtgcgtcccatcctgcagcgaggcggcagctcggcctccctccacaac
acctcgctgaggagcaccatcttccagctgatgatccacacactggaccctctgagagaa
gatgctgaccagaagctaactgagctagccactgatgctaatgctgctgctggagcacca
aagggagctgcagctgagccgtccacctcacagccccaaaagaaagaagaagagacgagg
gaaaagacggccgaccagccagacgagtcgaaggcggcagcgggggggtcagagggctct
cagggcagcactgaggatgagtgtggtgacgaggaaagtgaagactccgatgagagtgaa
ggtgatgaccttgacgatgaggaaaacaaggaggaagaagaagaggaggagagtgaaccg
ctgtctttaaagtggcccgacaccagacgcaagcaggccacctacctgttcctgctgccc
atcgtgttcccgctgtggctcacgctgcccgacgtccgcaacctggcgtccaggcggtat
tttcccgtcacgtttatcggttccatcctgtggatcggagttttctcctacctgatggtg
tggtgggctcatcaggtgggagagaccgtgggcatctctgaggagatcatgggcctcacc
atcctggcagccgggacctccatcccagacctcatcaccagtgtgatcgtggcccggaaa
ggtctgggggacatggccgtgtccagctcagtgggcagtaacatcttcgacatcactata
ggcctgccggtgccgtggctcatttacactctgttacacaacggggagccggtgaccgtc
agctccaacggcctgttctgcgccatcgtgctgctcttcatcatgctcctcttcgtcatc
atctccatcgctgtgtgtcgctggaagatgagccggatgttgggcctcaccatgttcgct
ctgtacttcgtgttcctcgtgctcagcgtcatgctggaggatcgcattctcatctgcccc
atctccatctga
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